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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001299 ID=TCONS_00001299|Name=TCONS_00001299|organism=Clytia hemisphaerica|type=transcript|length=1012bp
TGTTTTCAAGGATTAAGAATCCTTCATTTCAAAAATGGCTGCCTTTGGCT
TTGACAATTTAGAAGTCATTTGCGAACACTTCAATCTTGCTAAAGAAAAG
TGTTTTTGCTATAACATTGTCTTTTACGAACACGGAaagaaaatcgattt
ttgtGCTTTCTTCAACACAACTTCTGAGATCGAACGAAGAAAGAGAATAC
CGCATATATACGGAAACAAtattcaaaacgaggctaaaaccgaAGACATA
GTTTTCGCAGCCATTATTGTTTTGGTTTCGATCGTTGGTATCCTTGGTAA
CtctattgttttgatgtttcctcaaagaaagaaaaagtcaacTCATCTGA
AATTAACGTATTCGCTGGCATCAACAGACTTAATCTCATCAGCAATTTTC
ATAGTCCTTTTAACGCCCACCTTTTGGACCAAAGAATGGGTTTATGGAGA
AGTTGGATGCAAAATCCTTCGAACTCTAATGTTAAATCAATCCAGCTTTG
CAATAGGTATCATTTTGGTCATAGCCATCGAGAGATTCTTCGGAATTGTG
AAACCCTTCAAAATTGGCATATCAACAAATTTCCGATGTATGATGTGTTT
GGCGATCAATTTTGTATTTGCTTTCTGTTCTGCTATTCCCTACATCAAAT
ATTTACACGTCAACCCCGAAACAGAAAAATGCACTGAAATGTGGCAACAT
AGAGGCTATGCCATCATTTATTCAGGTTTCAATTTGGTCTTCTTTTTTAT
CGTCCCTATCATCACAATCGGTGTTCTCTACTGGAAGATAATTGTCACAT
TGAGAAATCAAGCGCTCACTTTCAAATTTCTTAACGGTTCTTACGTCAGC
GAGAACTACGCAAAGCGTATTGAGTACAATAAAAGAACTATCAAAAACTT
ATTTGGAGTGGTGTTACTGTTTGTGTTGTTCAATTTACCTAACAAGGTCA
AATGGATCATATTTGACACCAGCAGCGGTGGCATGCATGGTACAGAGGAT
GCACTGACAAGC Run BLAST on NCBI protein sequence of TCONS_00001299-protein >TCONS_00001299-protein ID=TCONS_00001299-protein|Name=TCONS_00001299-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MAAFGFDNLEVICEHFNLAKEKCFCYNIVFYEHGKKIDFCAFFNTTSEIE
RRKRIPHIYGNNIQNEAKTEDIVFAAIIVLVSIVGILGNSIVLMFPQRKK
KSTHLKLTYSLASTDLISSAIFIVLLTPTFWTKEWVYGEVGCKILRTLML
NQSSFAIGIILVIAIERFFGIVKPFKIGISTNFRCMMCLAINFVFAFCSA
IPYIKYLHVNPETEKCTEMWQHRGYAIIYSGFNLVFFFIVPIITIGVLYW
KIIVTLRNQALTFKFLNGSYVSENYAKRIEYNKRTIKNLFGVVLLFVLFN
LPNKVKWIIFDTSSGGMHGTEDALTS Run BLAST on NCBI transcript from alignment at sc0000007:943596..944607 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001299 ID=TCONS_00001299|Name=TCONS_00001299|organism=Clytia hemisphaerica|type=transcript|length=1012bp|location=Sequence derived from alignment at sc0000007:943596..944607 (Clytia hemisphaerica)
GCTTGTCAGTGCATCCTCTGTACCATGCATGCCACCGCTGCTGGTGTCAA
ATATGATCCATTTGACCTTGTTAGGTAAATTGAACAACACAAACAGTAAC
ACCACTCCAAATAAGTTTTTGATAGTTCTTTTATTGTACTCAATACGCTT
TGCGTAGTTCTCGCTGACGTAAGAACCGTTAAGAAATTTGAAAGTGAGCG
CTTGATTTCTCAATGTGACAATTATCTTCCAGTAGAGAACACCGATTGTG
ATGATAGGGACGATAAAAAAGAAGACCAAATTGAAACCTGAATAAATGAT
GGCATAGCCTCTATGTTGCCACATTTCAGTGCATTTTTCTGTTTCGGGGT
TGACGTGTAAATATTTGATGTAGGGAATAGCAGAACAGAAAGCAAATACA
AAATTGATCGCCAAACACATCATACATCGGAAATTTGTTGATATGCCAAT
TTTGAAGGGTTTCACAATTCCGAAGAATCTCTCGATGGCTATGACCAAAA
TGATACCTATTGCAAAGCTGGATTGATTTAACATTAGAGTTCGAAGGATT
TTGCATCCAACTTCTCCATAAACCCATTCTTTGGTCCAAAAGGTGGGCGT
TAAAAGGACTATGAAAATTGCTGATGAGATTAAGTCTGTTGATGCCAGCG
AATACGTTAATTTCAGATGAgttgactttttctttctttgaggaaacatc
aaaacaatagaGTTACCAAGGATACCAACGATCGAAACCAAAACAATAAT
GGCTGCGAAAACTATGTCTtcggttttagcctcgttttgaataTTGTTTC
CGTATATATGCGGTATTCTCTTTCTTCGTTCGATCTCAGAAGTTGTGTTG
AAGAAAGCacaaaaatcgattttcttTCCGTGTTCGTAAAAGACAATGTT
ATAGCAAAAACACTTTTCTTTAGCAAGATTGAAGTGTTCGCAAATGACTT
CTAAATTGTCAAAGCCAAAGGCAGCCATTTTTGAAATGAAGGATTCTTAA
TCCTTGAAAACA Coding sequence (CDS) from alignment at sc0000007:943596..944607 >TCONS_00001299 ID=TCONS_00001299|Name=TCONS_00001299|organism=Clytia hemisphaerica|type=CDS|length=978bp|location=Sequence derived from alignment at sc0000007:943596..944607 (Clytia hemisphaerica)
GCTTGTCAGTGCATCCTCTGTACCATGCATGCCACCGCTGCTGGTGTCAA
ATATGATCCATTTGACCTTGTTAGGTAAATTGAACAACACAAACAGTAAC
ACCACTCCAAATAAGTTTTTGATAGTTCTTTTATTGTACTCAATACGCTT
TGCGTAGTTCTCGCTGACGTAAGAACCGTTAAGAAATTTGAAAGTGAGCG
CTTGATTTCTCAATGTGACAATTATCTTCCAGTAGAGAACACCGATTGTG
ATGATAGGGACGATAAAAAAGAAGACCAAATTGAAACCTGAATAAATGAT
GGCATAGCCTCTATGTTGCCACATTTCAGTGCATTTTTCTGTTTCGGGGT
TGACGTGTAAATATTTGATGTAGGGAATAGCAGAACAGAAAGCAAATACA
AAATTGATCGCCAAACACATCATACATCGGAAATTTGTTGATATGCCAAT
TTTGAAGGGTTTCACAATTCCGAAGAATCTCTCGATGGCTATGACCAAAA
TGATACCTATTGCAAAGCTGGATTGATTTAACATTAGAGTTCGAAGGATT
TTGCATCCAACTTCTCCATAAACCCATTCTTTGGTCCAAAAGGTGGGCGT
TAAAAGGACTATGAAAATTGCTGATGAGATTAAGTCTGTTGATGCCAGCG
AATACGTTAATTTCAGATGAgttgactttttctttctttgaggaaacatc
aaaacaatagaGTTACCAAGGATACCAACGATCGAAACCAAAACAATAAT
GGCTGCGAAAACTATGTCTtcggttttagcctcgttttgaataTTGTTTC
CGTATATATGCGGTATTCTCTTTCTTCGTTCGATCTCAGAAGTTGTGTTG
AAGAAAGCacaaaaatcgattttcttTCCGTGTTCGTAAAAGACAATGTT
ATAGCAAAAACACTTTTCTTTAGCAAGATTGAAGTGTTCGCAAATGACTT
CTAAATTGTCAAAGCCAAAGGCAGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001299-exon-sc0000007-1491911889:943596..944607 | TCONS_00001299-exon-sc0000007-1491911889:943596..944607 | Clytia hemisphaerica | exon |
| TCONS_00001299-exon-sc0000007-1510915933:943596..944607 | TCONS_00001299-exon-sc0000007-1510915933:943596..944607 | Clytia hemisphaerica | exon |
| TCONS_00001299-exon-sc0000007-1575043694:943596..944607 | TCONS_00001299-exon-sc0000007-1575043694:943596..944607 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:943596..944607 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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