TCONS_00001295 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001295
Unique NameTCONS_00001295
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001295 ID=TCONS_00001295|Name=TCONS_00001295|organism=Clytia hemisphaerica|type=transcript|length=246bp
CTTACATAATCATCCCATTTGATTTTCATTATGGAACGGAGGTGACGTTG
TTGGAAGGTACGGAGTTGTCGAATTTCAAAGAGTAAATAAGAGTAAAGAG
TCCAAGTCTCACTCCCGTACAGAAGAATTGGTAGTAAACATTGCTTGTAC
ACTGCGATTTTAGTCGAGATTGTCAAATTGTGGTTATCAAAGACTCTGTG
TCTAAGCCTACCAAAAGCACTGGATGTTGCTTGGATGCGTGAAGTG
Run BLAST on NCBI

transcript from alignment at sc0000007:885939..886184

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001295 ID=TCONS_00001295|Name=TCONS_00001295|organism=Clytia hemisphaerica|type=transcript|length=246bp|location=Sequence derived from alignment at sc0000007:885939..886184 (Clytia hemisphaerica)
CACTTCACGCATCCAAGCAACATCCAGTGCTTTTGGTAGGCTTAGACACA
GAGTCTTTGATAACCACAATTTGACAATCTCGACTAAAATCGCAGTGTAC
AAGCAATGTTTACTACCAATTCTTCTGTACGGGAGTGAGACTTGGACTCT
TTACTCTTATTTACTCTTTGAAATTCGACAACTCCGTACCTTCCAACAAC
GTCACCTCCGTTCCATAATGAAAATCAAATGGGATGATTATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000699XLOC_000699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001295-exon-sc0000007-1491911889:885939..886184TCONS_00001295-exon-sc0000007-1491911889:885939..886184Clytia hemisphaericaexon
TCONS_00001295-exon-sc0000007-1510915933:885939..886184TCONS_00001295-exon-sc0000007-1510915933:885939..886184Clytia hemisphaericaexon
TCONS_00001295-exon-sc0000007-1575043694:885939..886184TCONS_00001295-exon-sc0000007-1575043694:885939..886184Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:885939..886184 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08075	0	4.7309	0	1.10167	0	1.23083	0	4.96065	2.18221	3.27463	1.01296	2.82481	6.49603	7.11758	5.77341	6.9719	7.93399	3.18125	8.36557	2.1486	6.14383	1.29799	2.36342	0	0	1.47405	0.34881	15.4522	17.2852
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001295 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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