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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001288 ID=TCONS_00001288|Name=TCONS_00001288|organism=Clytia hemisphaerica|type=transcript|length=1300bp
TCTTTCCCTAGCAAGAGCGAATAATGAAGAATAATGATTATTTAGCAGTA
ATTTCTCCTCAATTATTTTATGGATTATTATGTAATGTCGCAATATTAAC
TCTCACTACAATTCTCACAAAACCTTGACTTCCTGTCACAACAACCTTGT
GTCtccaaatgttttatttttacagctTTTCCGAGATAAGGATTTAGCTG
CTTTCCTTTGAACCTGTATTGAACTCAGTTATTTGTTGTATTCAAGTATT
CTTATCCGAATTCGCTACAAATCCAGTGAGAAAATCACTGCTAAATATAC
TTTTTCTCAAACAACTTAAAAGGTTGACCTTGCCTTGTTACTTTGACAGG
TCTTTGCATGTTTTAGCCACCAGTTTTGAATGTTGTCAATAAAAGAAATG
TCTTTGTAGTTACCACAAACGACTTGTGATCGCCAACATCAATTTGAAAA
ACATGCTCTATAGACGTTTGCGAATAATTAAATTGTTGGAAATGATTGAT
TGTTTATAAGTTTGAAGATTCTTTGTCGAACCGCAAAAGCcattttaatt
aaaaacttCTGCTCCCGATGCCAAGAATTTTTCTGATGTTTAGAAAAGTC
CAGAAATTTCATTGGTAGCATTATTCATTTAGTGATATGATATTCTTTGC
AAATTCATCGCTGTTAGAAAAGTAGACGTAAAAAAGATTAGAGCATCGAA
AGTGTCAATCTCAgcgattttgttttctttccgGTCCTTGAATTATCACT
ATCTGCATTTTCTGTGATTTTGCTTTGTTTGCGCGAATTATTCTGCTTTA
AGCCATAGATTTTGCTTTGTTAAGTCACAGAATTGATTTAAGATTCTAGc
aagatttttaaaacattgaTCCTAAGAATCCAAACTTGTTTTTTGTCTCT
GTGATGTCACTTTCCAAAGACGCGGTATATAAAGGAAGGAATATTTGATT
CTAAGAAACGGATTTGATGATCCTTATTCTATGGAAAATTTCCAGAACAA
CAACTTGAAATCTTTTTctcttgagttttgtttatgCATACAAAGCTTTA
CATAATAACAGAGTTGCATTTTTAGCTTGCAATGCCAACTCAGCATTAGA
TTCAACAATGTAGTAGGGTCGTTCTAAAATTGGCTGAGTTTTGCATTAGA
TAAAGTGAACCCGCATTTTCTGATAATCTATCGCAGATAATCTtgatcaa
aagactttttttcgATCAACTTAATTTTGTAAGCCTCTTTGTTGTATGGA
AAGACAAATGAGTAAATGACGAATGTAATTTTCCGTCACTGTTACATCAC Run BLAST on NCBI transcript from alignment at sc0000007:718407..719706 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001288 ID=TCONS_00001288|Name=TCONS_00001288|organism=Clytia hemisphaerica|type=transcript|length=1300bp|location=Sequence derived from alignment at sc0000007:718407..719706 (Clytia hemisphaerica)
GTGATGTAACAGTGACGGAAAATTACATTCGTCATTTACTCATTTGTCTT
TCCATACAACAAAGAGGCTTACAAAATTAAGTTGATcgaaaaaaagtctt
ttgatcaAGATTATCTGCGATAGATTATCAGAAAATGCGGGTTCACTTTA
TCTAATGCAAAACTCAGCCAATTTTAGAACGACCCTACTACATTGTTGAA
TCTAATGCTGAGTTGGCATTGCAAGCTAAAAATGCAACTCTGTTATTATG
TAAAGCTTTGTATGcataaacaaaactcaagagAAAAAGATTTCAAGTTG
TTGTTCTGGAAATTTTCCATAGAATAAGGATCATCAAATCCGTTTCTTAG
AATCAAATATTCCTTCCTTTATATACCGCGTCTTTGGAAAGTGACATCAC
AGAGACAAAAAACAAGTTTGGATTCTTAGGAtcaatgttttaaaaatctt
gCTAGAATCTTAAATCAATTCTGTGACTTAACAAAGCAAAATCTATGGCT
TAAAGCAGAATAATTCGCGCAAACAAAGCAAAATCACAGAAAATGCAGAT
AGTGATAATTCAAGGACcggaaagaaaacaaaatcgcTGAGATTGACACT
TTCGATGCTCTAATCTTTTTTACGTCTACTTTTCTAACAGCGATGAATTT
GCAAAGAATATCATATCACTAAATGAATAATGCTACCAATGAAATTTCTG
GACTTTTCTAAACATCAGAAAAATTCTTGGCATCGGGAGCAGaagttttt
aattaaaatgGCTTTTGCGGTTCGACAAAGAATCTTCAAACTTATAAACA
ATCAATCATTTCCAACAATTTAATTATTCGCAAACGTCTATAGAGCATGT
TTTTCAAATTGATGTTGGCGATCACAAGTCGTTTGTGGTAACTACAAAGA
CATTTCTTTTATTGACAACATTCAAAACTGGTGGCTAAAACATGCAAAGA
CCTGTCAAAGTAACAAGGCAAGGTCAACCTTTTAAGTTGTTTGAGAAAAA
GTATATTTAGCAGTGATTTTCTCACTGGATTTGTAGCGAATTCGGATAAG
AATACTTGAATACAACAAATAACTGAGTTCAATACAGGTTCAAAGGAAAG
CAGCTAAATCCTTATCTCGGAAAagctgtaaaaataaaacatttggaGAC
ACAAGGTTGTTGTGACAGGAAGTCAAGGTTTTGTGAGAATTGTAGTGAGA
GTTAATATTGCGACATTACATAATAATCCATAAAATAATTGAGGAGAAAT
TACTGCTAAATAATCATTATTCTTCATTATTCGCTCTTGCTAGGGAAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001288-exon-sc0000007-1491911889:718407..719706 | TCONS_00001288-exon-sc0000007-1491911889:718407..719706 | Clytia hemisphaerica | exon |
| TCONS_00001288-exon-sc0000007-1510915933:718407..719706 | TCONS_00001288-exon-sc0000007-1510915933:718407..719706 | Clytia hemisphaerica | exon |
| TCONS_00001288-exon-sc0000007-1575043694:718407..719706 | TCONS_00001288-exon-sc0000007-1575043694:718407..719706 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:718407..719706 . |
Blast
The following BLAST results are available for this feature:
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