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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001190 ID=TCONS_00001190|Name=TCONS_00001190|organism=Clytia hemisphaerica|type=transcript|length=786bp
ATTTCAGCTATGTTtgaaaagttcaagaatggcaAGCATGAAGTGTGTTA
TTGgaataatattttcaatatcaagtgccattttattttgtaaaagttGT
AAAGGATacaatttttacgaaaaattcCTCATCCCAGCACAAAGTTATAC
AAAAGAAGGAGGAGTTTTTCGAACGAAATCACCCACCGAATGGTTATTAC
GTTGTGGgaaaagaaaatgtatgaacACCATTATTGAAGATGAACATTGT
CAATGTACGACTTCAAACTGTGTAAAAGAAGAATCTGAAGCAAGTGGAAA
TCCTTCAAATGTTCAATGTTATCAAAatttTCTGGTCATCGTTTTGGTAT
GTGCATTTCTGTTTGGAATTTCAAGTTGTGAAagcaaatatctttccaat
cgtcAACTCAAACCCAAGAAAACACAATCGGAAACAAGACCCAAAGCGTT
TATTACATTACGACAACGTAATTGCCATGATGTTTGTCGGTTTAAACATA
GACTTTGCAATGATATTGCATCGATGAAGAAGATCAGGGAAGAACAGATC
ATCTGCACAGCTTCGAAAACTACTTGCTTGCTCAAATGTTCAGCATTGAA
ATAATTGGACACAGACATTATTCACCATAAAAAGGAAAACCAAACtcagt
attttagtttttttgtataaaattttaaattatagTATTGACAGAATCAG
CTCTTGTAAATAAAGACACTTTATTCGAATATTTAGAagtaatacttttt
aaaagatgGACGACCTATATTTTAGGGAAATTTAAA Run BLAST on NCBI transcript from alignment at sc0000007:901125..909553- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001190 ID=TCONS_00001190|Name=TCONS_00001190|organism=Clytia hemisphaerica|type=transcript|length=8429bp|location=Sequence derived from alignment at sc0000007:901125..909553- (Clytia hemisphaerica)
ATTTCAGCTATGTTTGAAAAGTTCAAGAATGGCAAGCATGAAGTGTGTTA
TTGGAATAATATTTTCAATATCAAGTGCCATTTTATTTTGTAAAAGTTGT
AAAGGATACAATTTTTACGAAAAATTCCTCATCCCAGCACAAAGTTATAC
AAAAGAAGGAGGAGTTTTTCGAACGAAATCACCCACCGAATGGTTATTAC
GTTGTGGGAAAAGAAAATGTATGAACACCATTATTGAAGATGAACATTGT
CAATGTACGACTTCAAACTGTGTAAAAGAAGAATCTGAAGCAAGTGGAAA
TCCTTCAAATGTTCAATGTTATCAAAGTAAGACGTTCGTCATTTGCCCTT
TAATACAATTACATTAAGTGTGTGTACTTATGGAAAGGTTAAGGAAGTGA
TTGTCCTCATCAGGTCACTGTGACGGCTTGTCATTCATGAAAATTGAATA
TGGCTGTTAAACGACCCTAGCATAAACTCAGAAGAGAACCTTTTGCGGCT
TCACAGGCTTACTTTGTGTAATACAGTTAACTCTCGCTAATTCGAAGTCG
AATGAGAGAAGTCAAACTTGTTCGAATAAGAGAAGCATTCGAACTGTATC
GAGTATTTTACGAGGGCTTCCTTTTGACGGGGTTCCAGAATTAAATTCGA
ATTACAGAAAAATTCGAATAATAGAAGTTCCAGCCAGTAAACTCTTACAT
TGTTAAATTAAAGTTTCATTTTTAGCTCCATTTATACCAGCCACATTAAC
ACCGATCTGTTACGAAGCGAAGAACAACCAATATGCTTCATTCACAATCC
CACTAAAAGGAAAAATCAACTCTATCAAACTCCAACATGCCTCCGGTGGC
ATCAATTGTTCCCCAGTTTACAATGGAGGTCAAGGCTTGAGTAATTGGGG
TTGTCACCATAGCCATACAAGCTATCGAGAAGACGAAACTTTAACCGCAG
TGACCGATGCAAGCGATCAGATCCTCTTCCCAAACATTGGAAACTCAATT
TCATCATTCAAATTCAAGATACCGGGTGCTTTCCAAAATGACGAGGAGTT
GACGTTGACACGAGACGAGCCTTTGGTGGTGGAGAAGGGCCAAGAGATGA
GGGTTTGGAGCACACAGGATTTGTTTAAGATGTTCGAAGATGACAATACA
GGAAAACATTGTGTGTTGGTTTTTCTAAAGTTTTGCTGAGACTAAAATGT
TGAAAGTGTTATTGGCGAAAAAGCAAATACTTTAGGCGTACAAACTTTCG
CGAGCAGAAACTTTTCACAGTGAATAAATTGTATATATTATATATAGCAT
TTTCATTTCCAATTTATTCACTGTTCAATAGTCGAGTGGCATGATTCTTC
ATGACTTTTACGTACAATTTAACGGTATCCTTACTTTCTTTGTTAATACT
GATATTCAAAGAGTGTTATATTAATTGTGATATAAGAAAGGAAATTGGCT
GATGTGGCCAGTTTCTCCCCTGCCCACCAAGCTACGAAAATGGAAATTGG
TTAAAACTGAAAATTTGTCGAAATGGGAGGATTGATGCTTTTTTTGTTTA
ATTTTCCCGGAGGAAAAACATTTGCTTTATATATTCACTTTATATATTGA
GGAGTTTTCTATTTCCCAGGTCACAAATAAACGATTTAAAGCACCCGCAA
CTTCTGTTGAGTATCAGCGTCTAAACCGATCGTTAATTTACGCTTTAGAT
TTCGAATCAATATTTCCAATTGGTGGATAATTTGTTAAAGTAAACAAAAT
ATTAGGATGATGTGTCTGGAGATGTAACTCGAGCTAAATGTTGCCCAAAA
AAGAAAGGTTAGTTAGTTGGAAAAACTCAGTTAGCCCTTAATTAAATAGC
TAGCCCTTTTCCTAACTCTGTAATTCAGATACTCTTGCTTCAAAACGTGT
GCCGTTTGTTGCTTTTAGAGCAAATTTTTGCACTTGTTTCGAATTGAATG
TTGAGGTAAAGCGAAATACCGCATCATATTTTCATTGTGTGGCGCCTACA
ATACCAACATTACTAACGAGATAGGCGTAAAGCTTCCTCAACCACATTTA
GAATCAAACAATTTGCATTGACCTGAAGCCACCACCCACTTAATTGAATG
TCGAGGTTTTAAGAATTACTCATCTTAAATCAAATTTTATTCTGATTATA
ATAATTCTATTAGTCAGCAAATTTCACTGTAAAAGATATAGTACCCTCGA
TAGAATAATAGAGCAAATTACTTTCACTCATGCACTAAAAGATATCCTTA
AAATCAAAGTTTCAAGATGGTAGAACATACACATGAGCTGTTATGACAAA
GACGTGTGCGGTAATAAACTCCATGCACATTCTTTGTGAGTGAGTAAAAG
TATAAGCGTAAAGGCAATAAAACATTTCAGACGCATGAAGCACCACAAGG
AAGGAAATGAATTTCAACCGACACTGGCCTTCACCATGACAAACTTTACC
GAAAATTCGCATAATTTCTCTTCATAAAAAAGGTGCATGAAATTGCGTGT
TTATGAAAAAAGTGGAGTAAAGATGACCTTCGCCGAGCCCTGGTTGCACG
CGGATATTTACACTAACTTAAAAAAATAACTTGAGTAGTTTGACCACGAG
AATTATTTTGCGGAATGTATAAAATTGGAAGCTTAGCGGGAGAGAGAGAA
AGAGGAAAAGTGGACGAAAGTTAAAAGTGAAGTCTTTGCAAGGTTGATGA
AAACTCAGACCGGTGATCAAAAAGCATTAAGGGTGATTTCCTCTACCAGT
ATTTTATAATCACTGATGCAATTTATTGACAAAAATTCTCTCAAACAAGG
AAGATAGAAGATAGACGGCTTGTGAGGTGTTTATTTTAATCAACTTAGTT
TGTGCTTGAAGGTTGATTTTGTTACTTGGCATAATGAAGAAATATACAGC
CATGAAAACAGGTAGGTGTCTTTATTCTTCGTCTATCCAATAGATTTAGA
TCTCAGAGTTAAATATTTAGGGTAAGATTTTTCACAATGCTTTCATCTAA
AAAGAGGTGCTAGCTGGGGCAGCGTCTCGAAAATTCTTCGTTTTAAAAGC
TATTCATGCATCACGCAAAATTACCCATAAACAAAGCTCTTGGATTTTGT
TCTATGGATTTACAGGCTATGTTAATATGCAAACAGATCCTGATTATTCC
GCGCATGTCATCTTGGTCATGGCTCTGTAAAGGAACACAGGTTAGCGGAT
CGATTTGTTGATTTTCATCCATATTTGGATTTAGTGAAAGTGTTGGTTGG
CTGAAGCAACGCAATCAGACCAAAATCATACGCCAATCACAAACATAAAT
ACTGTATTAGAGCAAAGCAATTTTTTATGTATTGGCTGGACAACCAAGTC
AGATCTTCACATTCAACATATCCTTTTAGAACATAGCGTGGTGTGTGATG
ATCTACCATAAGATTAGGGCCCATATATTACAGACCTTTTCAGACCAAAG
AAGGTTAATAAAAAATGTAATTCACACCATGAAGTCCTCTAATTTCAAAA
TTTGAAAATAAATTAATTTGAGTTTGATGCGAATAGAGTAATGACCAAAT
TATTCCATCTTAGGTTTTTCCGTGGGTTTTCCATATAAATTTCTACTTTA
ATTAAGTTATCATGTACATCTAATATCTAAATACTCTCATCAAGCCTTCT
CTAAGATTTTGACCGATTTTCTCGCCTTTTCTTTTAAATTAAATGCTTAG
CACAAATTCTTAAGATTTCAAAATCACAATTTGATAGAAGTTAAATACAC
CCCTTCTCACAGACCCACTGTGACCCCTTCCCACTGGGAAAATTAGCCAA
AATATCGTCCCCAGCGGAAAATTATACACAAATCTTCACTGCAAAATAGT
GTGCTATTTTTTCCGTCCCCACCGTCTTTTCTGGCTCGAAAACAATAGAT
TTCAAAATCCCCGGCCATAAAACCCCATCGAGTTTTGGTCCGTTATTTTT
ACACCCACTGACTGAAAATCCTACCACTCCAGGGGAATAAGGCGGGTCAT
TGGAGGTCAAAATTCTTGCAACGTTACAAATCATTTTCAGAAGCTCATTT
TGGGCTTAAACGAAGCGTATAACTAAGTAGAATAAGATTCAGTCTAGGTA
GATGTTTTTTTTATTTTGATATTTTGCGTAATTCGCAAAAATCCTCAATT
TTGCGCTATTTTGATGACGTCATAAAAATTGAAATTCCAATAACTTTTGA
AATCTTTTGAAAATTTGCATTGAAATGCATCTTTGTTGAAAATTTGAAAT
TATTTTGATGATTCTATCAAAAGTTATTGGAATTTCAATTTTTATGACGT
CGACGAAATAAATAGCCTTAATCCCCTGGAGCAGGTCTGTGAAAAAGGGG
TGTTTAAATTCTCGAGGAAGATATAAAAAATCCCATTTTCGATTTCTGCT
CTATCCACGCAACGGATTAGAGATCAAGATATTCACTAATATTTCTTTTT
TGATAATAACACCTCTGCTAATGGAACTTCTTCCCATAGTGAGATGAAAA
TTTCTATAGAAACCCCAATGAATAAGCTATAATTTATATTGTTCCCAGAA
CAAAAAATTCCTGTGGAGCTGATTTTGGAGTCCAATTTTTTCCCTTTAAA
TTTCAAATGCGGATAAAAGCAAAGTAAATTTTTCCCTTTCTCCCCTATAT
TATAAAACGAGCTGTCAAACTCAAATTTTATCAAAAGTTAAAGCCATGCT
TGTTTTCGCTGCAGTGTATTTTGAGGCAGACAAAATGGTTTGAATTTTAC
TCATAAAGTGCAAACTTTATGGACCAACTCAGCTTATATTATCCACTAAA
AGAGTAAAAGAGTAAGACTACAAAATAATAAATGATGCCTTCAGTCCTGA
GAATCCATTCATTTGTAGTATTTACTGTTTTTTTGTACACATTTCGGCGA
TGCTTCAAAGAAAAATATTTTGAAGCCCGTTTCCTCGTTTTTTGTCATGA
CGTCATAATTTGCCCTTTTGTTTCCAATATTTTCAGATAAAAGCTGTGAT
ATTTTTTTACCAAGAGTATTATACTTGGTAATGGCTGACGTCAGCAAAGT
GTTAAGGCTTGCATCCCTCAATTTTTCTTCCTTGACACATTAGGACAGGA
ATTTCAGGACTAATTTCATAAAATGCAATCTTCACAAACAATCTTCAGTG
TTTTCAATTTTTAAAATCACAGTTGTTCGACTACAAAAATTTTACTGAGA
ACTACGGCTTTGCAGATAGCCACATGATAAGAAATATAAGGCATCAAAAA
GTGAGATCCACCCACGATTGTTTTGAAAATCAGAATTTGGCCTTCCATTA
AGATATTAAAAGGTGTAATTAAAAACCCTCGCATCTCATCATCAACGTCT
ATGAATGGCTCAAGGAAATTGTCTCAATGCCAATATCCTACATTCTATGT
GCCTACTAACTCAATGATTAAGAAGTAAACAACAAACTCGTCATCGATGA
CAACTCATTTAAAAACGATTAACTGTGAAATCAATACTCAAACCCCAAAC
ATACACCGCTCTGACCGATACGTGCTCATGCTAAACCAATGGGCTGTCGT
AATTTCCCTGCAACATATGGGCTGTCAGAAATATCAAACTTCTATACTGC
AGAAAATTAAATTGAATTTAGATTTCGATAAAATTGACATTTTTTTTCGC
TAGGTCACAATTTCATATTTTAAAATCTGCTAAAAATCCGGAGGTAAATG
ATTTCAAAGTTATGTTTTGCCTTTGATCGCTCTCATCGAAAATTCAAGCT
GAAAGGAATTTTTGATAATTATTTTTAAACTGTTCTGGGTGTAAACCTGG
TCTAGTCACGTAAAAGCTCTAAAATTTCAGAATTTTATTGGCTGAAGTGG
TTTTATTTTTTCTAAAAGATCGCGGTAACATGTTCTTCGACAGGATAACG
ACGACTGGGTTTTTTATTAAATTAAGTAAAATTTAATAGATGATAAAAAT
TTGTTCACGGAAATTATACCATTGTTGTTAAAGAAACATATCAATTAAAG
ACCGGTTAAAATACCATACACAATTTTTTTGTTATGGAAGGAAAAAAAAG
TTTTAATTTGCCACGTACTTAAAAAAACATCAAGAGTGCATTAACGGGAC
AACATTTGAGCGGAATCTCATTAAAACGAAAACTACATTGCGCAACATCC
TTACACTCCTACCATTCACAAATTCCATTCTCATGATTCAATATGTCTCA
AAAGAATCGCCTTCCTTCACCAGAATCAATGTGATATTCATAAATCAATA
AACTTGAACGCTTGAAGGACAGCTTGGGTTGAGTGATTGGGAATGATTGA
CCAACAAAAAATTAGGACAATACGCACATGAATTATTATCGAAAACCCAA
AAACCTATACTAACAAAAATTAAAGGGGTGGGCAGTAAATGAGGAGTAAG
TTGGTGACTGGAAAGAAATTAGCAAATGAATGGACGGCAAAGTAAATGAA
TGGTAAATTAGAGAGCGGATGCCATGCGCGTGCCAACATAATTTGATACA
ATTCTTTCTTCAACAAAACTCTAAATTTGTAATTGACAATATCTAAGGAA
GAGTACTTTTCATGATGAATCAACTATTCTTTAAAAAAAAGGAAAAAAGA
TGGTCAATTATTAGATTTCCCTTTTCAATCAAATGCAATACTTTACTTGT
TAGAATTGAAATATTTGATGCCCTTCCACGTGACAAGTGAACAGGATATC
AAATCCTTCCTACATTCATTGGCTGTATACTACCAGGTATGCCAATCTTA
ACTTCACGAAGGGGCTGGGTTCGATTTTAACAATGTCAAATGTCAGTATT
GTACTGTTGTGTCACGTCAAAACAATGACTTGTTCCATTCGACGCTCTTT
CCGCTCTACAAAACTAAACATACAATCCTTTCTTTATAAAACTTTTTGAA
CAAAGATGTTGGGTGTATATTAAGTAATTTCTCCGAACTATTATGTTGTA
TATTTTGAGTTCTCAAAGATATTGTTCAATATAACAGTCATTATTAATCC
TTTGGTCCAATATATTTTCCCGATTTTTTCAAAGATGATTTAAGGACCGT
TAATTTCCGAGGCAAATTATTTAACGTTCATCACAAGATCCCTTGTCATG
AAATTAATCATCCGAAAAAGCCATTTTGACATCCGCTAATGGGTAATATC
CAATCAAGTGTGGTTGTAACAGAATAAGTTACATTCAAACATTTTATTAA
TGTTCAAAGTTTGAGGTTTGCTAAATAACCTCACTTCTGTCAAGTCGCAT
TGATTTATGATCGCAAAAATTCATCTTTGAAGTGGTCGTCCTATGGGACA
GTCAAATGATAAATTTAGATTGTGAAGATATATTTAGTTGAAGGCGTTTG
AGCAGTCGTCTTTATCTTAATTCCGATAGATCATAGTCGAAGAGGCACTT
TTATATCGGCTTGCCTTTCAGAACAATCAGAGGAATTTGTATTGTTTGAT
TGTTTGATTGACATCTTGTGAAAGCATTAAATGTGATTTCAGAAAGGTTT
GTTCGTCATTACTGAATGAACGATTTGATGAACAAACACTCACCACACAT
AACAAATTGAATTTGATTATCCAAAAATCATGAAAGGTTCGTTTAGAAAA
TGATTTTGATGATTTCAACTTTACTTTGATAAATGGATTTCTATGTGCAT
GGCTTTGTTAAATTCTTGCATACTGGAGACCTTTTAATTTCAATGAAATG
ATCTCAATTTCAGACGCATTTAGTTGTTGAATAAGCGAGTCCAGCCCAAA
TATTAAAATGTAAATGAATGCAGTCATCAGAAATAGACAAACTAATCTAT
TAAGTTTGATGTTTTAGTTGTATGGAATGCTTAGTGGGTATACAAAACCT
AGTGGTCACTCGTGTCAACACCCAGCATAACATATAAGAAGAGGACTTTG
GGGGGGGGGATAGGACTTTAGGGGCTCGATCAGCTTTGATGTTTACGAAT
GTTTCTTTTTTTCATTTAGATTTTCTGGTCATCGTTTTGGTATGTGCATT
TCTGTTTGGAATTTCAAGTTGTGAAAGCAAATATCTTTCCAATCGTCAAC
TCAAACCCAAGAAAACACAATCGGAAACAAGACCCAAAGCGTTTATTACA
TTACGACAACGTAATTGCCATGATGTTTGTCGGTTTAAACATAGACTTTG
CAATGATATTGCATCGATGAAGAAGATCAGGGAAGAACAGATCATCTGCA
CAGCTTCGAAAACTACTTGCTTGCTCAAATGTTCAGCATTGAAATAATTG
GACACAGACATTATTCACCATAAAAAGGAAAACCAAACTCAGTATTTTAG
TTTTTTTGTATAAAATTTTAAATTATAGTATTGACAGAATCAGCTCTTGT
AAATAAAGACACTTTATTCGAATATTTAGAAGTAATACTTTTTAAAAGAT
GGACGACCTATATTTTAGGGAAATTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001190-exon-sc0000007-1575043694:909228..909553 | TCONS_00001190-exon-sc0000007-1575043694:909228..909553 | Clytia hemisphaerica | exon |
| TCONS_00001190-exon-sc0000007-1575043694:901125..901584 | TCONS_00001190-exon-sc0000007-1575043694:901125..901584 | Clytia hemisphaerica | exon |
| TCONS_00001190-exon-sc0000007-1510915933:909228..909553 | TCONS_00001190-exon-sc0000007-1510915933:909228..909553 | Clytia hemisphaerica | exon |
| TCONS_00001190-exon-sc0000007-1510915933:901125..901584 | TCONS_00001190-exon-sc0000007-1510915933:901125..901584 | Clytia hemisphaerica | exon |
| TCONS_00001190-exon-sc0000007-1491911889:909228..909553 | TCONS_00001190-exon-sc0000007-1491911889:909228..909553 | Clytia hemisphaerica | exon |
| TCONS_00001190-exon-sc0000007-1491911889:901125..901584 | TCONS_00001190-exon-sc0000007-1491911889:901125..901584 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:901125..909553 - |
Blast
The following BLAST results are available for this feature:
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