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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001171 ID=TCONS_00001171|Name=TCONS_00001171|organism=Clytia hemisphaerica|type=transcript|length=1083bp
ATTACAGTCGAAGAGTTCCCAACACGTCACGACGTTTACGAACATGGCTT
ACTTTCAGTTCTCGCACACATGGAATTCGAGTTTGGCGCTTTTTTTGGCA
CTTACATGGCAGTGTCCTTTTTGTGGTACGTCAACCATACTATATTACAT
CTTTTTCATACCATCGACATTGGCGCATTGTATTTGCAGAAAATCTTTCT
TGCATTTCTTTGTTTTGCACCCATATTGAACAATATGATGGTGGAGTTTG
AATTCGGTCATGGTACAGAATCAGAGAAGCGAACAGCCTTGCAAtggagc
agtggaatgttatTTGCCGCAAGTTTAACGCAACTCCTGATGGTTATTTG
GGGATCAATGCGAAAAGACAAACTTCTACACCGGTGGGCAACTCATGAAG
ACAAGAACCATAAGAATAAGATGAATCGAAAACAATTCATGTACATTCGA
TTGAAAATCATTGTTGTTCCTTTCTGGACTCTTGTTGGTATCTTCAGCTC
ATATGCTTCTGGTAACGCAGCTATGATCATCACCTGTGCGTGTATAGCTG
GTACCCTACTCTCCTTTATCATACTCAAGTTTGTCTTCATAAATCACATC
AACAAACCAGCTATATTCACCACCCAAAACAGTAGTTCCGGTAAGCATTT
ATCCCTCGGTGACATTGAACTACGGAACAGTATGGCGGAGGAGATAGCGG
ATGGGAAAGTGTACGAGGATGAAAATGAGATGGAGAGAGAAGTTCTGGAA
GAGGcggaaaagaaagaaattaaagaCGAACTAAAGGAAGAACGACAGGA
AAATGATATGGCTGAAACTGTTCTAAATGAAGAATCAAATGAGGACACTA
TTATGTaatattgaaaaagaattttagtTTTATCTACTAAGAATTTCTAT
TGATTATTGATAGGATCAAAACATAATCATTTAATCCTTAACTTAGATTT
ATTTCTGGCTGGCCGTAGTAGTTCCGCTCTTGTCTGGAAGCTTTCTCCTT
TGTGTATATCATAAGTTAAAAaggatttgctcagtttttgaacACGCTAC
CACGTACTCTTCTTAgcattggtttaagattta Run BLAST on NCBI transcript from alignment at sc0000007:657865..658947- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001171 ID=TCONS_00001171|Name=TCONS_00001171|organism=Clytia hemisphaerica|type=transcript|length=1083bp|location=Sequence derived from alignment at sc0000007:657865..658947- (Clytia hemisphaerica)
ATTACAGTCGAAGAGTTCCCAACACGTCACGACGTTTACGAACATGGCTT
ACTTTCAGTTCTCGCACACATGGAATTCGAGTTTGGCGCTTTTTTTGGCA
CTTACATGGCAGTGTCCTTTTTGTGGTACGTCAACCATACTATATTACAT
CTTTTTCATACCATCGACATTGGCGCATTGTATTTGCAGAAAATCTTTCT
TGCATTTCTTTGTTTTGCACCCATATTGAACAATATGATGGTGGAGTTTG
AATTCGGTCATGGTACAGAATCAGAGAAGCGAACAGCCTTGCAATGGAGC
AGTGGAATGTTATTTGCCGCAAGTTTAACGCAACTCCTGATGGTTATTTG
GGGATCAATGCGAAAAGACAAACTTCTACACCGGTGGGCAACTCATGAAG
ACAAGAACCATAAGAATAAGATGAATCGAAAACAATTCATGTACATTCGA
TTGAAAATCATTGTTGTTCCTTTCTGGACTCTTGTTGGTATCTTCAGCTC
ATATGCTTCTGGTAACGCAGCTATGATCATCACCTGTGCGTGTATAGCTG
GTACCCTACTCTCCTTTATCATACTCAAGTTTGTCTTCATAAATCACATC
AACAAACCAGCTATATTCACCACCCAAAACAGTAGTTCCGGTAAGCATTT
ATCCCTCGGTGACATTGAACTACGGAACAGTATGGCGGAGGAGATAGCGG
ATGGGAAAGTGTACGAGGATGAAAATGAGATGGAGAGAGAAGTTCTGGAA
GAGGCGGAAAAGAAAGAAATTAAAGACGAACTAAAGGAAGAACGACAGGA
AAATGATATGGCTGAAACTGTTCTAAATGAAGAATCAAATGAGGACACTA
TTATGTAATATTGAAAAAGAATTTTAGTTTTATCTACTAAGAATTTCTAT
TGATTATTGATAGGATCAAAACATAATCATTTAATCCTTAACTTAGATTT
ATTTCTGGCTGGCCGTAGTAGTTCCGCTCTTGTCTGGAAGCTTTCTCCTT
TGTGTATATCATAAGTTAAAAAGGATTTGCTCAGTTTTTGAACACGCTAC
CACGTACTCTTCTTAGCATTGGTTTAAGATTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001171-exon-sc0000007-1575043694:657865..658947 | TCONS_00001171-exon-sc0000007-1575043694:657865..658947 | Clytia hemisphaerica | exon |
| TCONS_00001171-exon-sc0000007-1510915933:657865..658947 | TCONS_00001171-exon-sc0000007-1510915933:657865..658947 | Clytia hemisphaerica | exon |
| TCONS_00001171-exon-sc0000007-1491911889:657865..658947 | TCONS_00001171-exon-sc0000007-1491911889:657865..658947 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:657865..658947 - |
Blast
The following BLAST results are available for this feature:
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