TCONS_00001119 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001119
Unique NameTCONS_00001119
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1993

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001119 ID=TCONS_00001119|Name=TCONS_00001119|organism=Clytia hemisphaerica|type=transcript|length=1993bp
ATCCAAACTTTCAGAAGCGAACTTTACAATGGATGGCGCGATCAACTAGC
CTCAGGCTTCCACGCAACCAGACCGCAGCCAACAACGTTTTCTACCAATC
ACAACGCAAGCAAAGAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAG
GCTCCAAGCTTTGGGTTGATTCGTTCGAATATGACGAGAGTGATGGATGG
ACTCCTCAACAAATCAAGCGACAAGAGGCAATCTACGAATTATATTGCGG
AGAAACAGACATGGTGGAAGACTTGAAACTGCTACAAGAGgtTTACTTCA
ATCCGGTGgccaaattaaaacttttgacGGAAGAAGACCTCGCCTCCATC
TTCGGAAATATTCAAGTTTTGCTACCGTTACACGAGGATTTGGTGAAACG
TTTGGAAGAAGTACGGACGGAGAACGGAAGCATCGAAGAGATCGGACGAA
TTTTGACGGAATGGATTCCCACGTTGCGCCCTTACATTCCGTATTGCGCC
AATCAACTACAAATGAAAAACATGCTCCTCCACAAGAccaaagaaaataa
acacttttcAGATTTCTTACAAAGATGTTTGGAATCGCCATTCAGCCGTA
AACTAGACCTTTGGTCTTTCTTAGATTCACCTAGAAGCAAACTGGTGAAA
TATCCGCTACTTATCTCCAACATGCATAAATATACGCCGAAAGAACATCC
AGATAATATCATCTTATACCAAGCAATTCAAGAATTGGAGGTTATAATAA
AAGAGGCAGATAAAGCCACAGGAAAATCGAAGAGTTCATTCTACAAAGAC
CGCATGTATTTTCTGGACGAAGGAGACCACAGAGAAGCATTATCTCAAGC
ACAAGTCCTTCTTTGTCACGGTTCTCTCAAAAACAAGAATGGAGGGaaaa
tcgaaGCGTTTCTCTTTGATACAGTATTTCTAATCACGCGGCCCGCTTCA
CGAAATGGTATGGAAATGTATCAAGTATTATCTCAGCCTCTACTCACGAA
TGACATGGAATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTT
CATTTCGATCCAGTCTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGT
GTGAATCCAAAAGAATTAACACGAGGTAAATCCATTATATTGCAAGCTAA
CGACCAACATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCT
CAATGCCAAGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGG
TGGTGAAATGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGAT
CAATTCGAGCGAATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCG
ACACTGATGAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCG
GGTTCGGGCTTGCTGTCGTACCAATGTAaccgattaaattaaaaagacaa
ttttttttagaaaaccgttttttagaaaaccgttaaaaaatgttttaaaa
acttggaaaataatttttgataccAATGCATAAAATGgacaattttttta
tatgatGACACGTACTCGTATGCTTgtatttatgttgttttttttttcgt
tcagtgTGTTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTT
TCGCAAGGACTCGCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTA
GAGTTCTATTTCGCACTTTATGTCGGCTGTTGAAAGatcataagaaaaat
atttgacgacaACCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTT
GGGTTTGTTATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCT
TTCaccttttatttttgtattcgtaatttttgttaatatttttcccGAAT
TTTTTCATTACTGTATTTGTTTAAAATTGTCAGAGAatatttttgtactt
tttttccTTCTATTGAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..450956-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001119 ID=TCONS_00001119|Name=TCONS_00001119|organism=Clytia hemisphaerica|type=transcript|length=11709bp|location=Sequence derived from alignment at sc0000007:439248..450956- (Clytia hemisphaerica)
ATCCAAACTTTCAGAAGCGAACTTTACAATGGATGGCGGTAAGCAANATG
TATTGATCAAACACCCGGTTCGATCGAAATGACAAAACATCTTGTTCTCG
ATCTTTTGTATCGCCTGTGTCCAAAGCAATTCCCTTCCAACTGGCTTAAC
CAGTGTCACAATGATTAAGAAACAAACACTTAGATTGTTTTGACACTATT
CTTGGTGGACAAGCAAGCGCTTTAGAATCGGTGACATGGACGTGTTGTAT
CCATATTCCTTACTCTATGCAGCACCTTATCCAAACTTTCAGAAGCGAAC
TTTACAATGGATGGCGGTAAGCAAAGGGCATTTTAGAAGGTTTTATTTTC
AAAGCATCTATATGTCTCATAGTAAAAAAGGGCCCGATTTTGAATACCTT
ATCGGGGAAAAAATGTCGGGGAAAGTGACGAAAATTTTGAGGGGGTGACG
AAACTTTTCCCCGATATTTTATCACCCGACCAAAGCTTTTACTCGATTTT
TTTCCCCCAACCAAAATTCAAATCAACTTTTGTACGCCTTTATTAACCGA
AATTAATGCTTTAAACGTCGAATTAGAAGACCTATTTTCGAGCTAGTGAA
GGAAACCATTTCATTTGGACAATTTAGTCGGGTGGAAGTGACGAAAATGC
CTCTAGGTGACGAAATTTTTCCCCGACGAAAAAAAAACCCGACAAAATAA
AACTCCGACATTTTTTCCCTGATAAGATAATGCTCGTAAAAAGTATTCCC
AAATTTAGGGGTACCTGATATGTTTGGGGATACCTGATATGTTTGGGGAT
ACCTGTAATTTCATAATTAGGGACGGGGCCTGTTATTTTTTTATGAAATA
TTTTTCTTGACTGACCCTATTTCTCATTTTTCAAGACTGTTTTTATAACC
TAGTTTGGTCCAGTTTGGTCAGCTATATTTTTCGTAAAAAAATATATTTT
TCCACCTTCTCATTAATGCTGATAAAGTGGCAACAAGAGTGCTAGACAAT
TGGTTTGGTTTAATACTTCAGTGATGTTAATTTAAAATTTTAACTTTGAT
CACGATATTTAAACATGGGTCCTTCACTATTTTGCCAAGAAAAAGTTAGC
CAACCTAAACATTAAGGGCAATGTCAATTTATCAGAATATTCAGTACTCA
AGCTAGGGCAGATATTAAATGCTGCAAATAATCATGAACATTTGCATGGT
TGTGTGAAATTCTTGCCTGATTGATGACGTGGGCCTTCAACATGCCCCCA
TGCCAACATGATTTTGGGATTGATCCAAAAACTGGTCCGAGCTTGCTCTG
AACATGCGCTTGGGTCGTCTTAAAACCGGGGGGATTTCATGAATGGCAAA
AGAGCACAAAAATCCTTTATTATTATTTCTAATGTTTTATAATAAAAAAT
GGGGTAACTCAAAGTCTGGGGGCTACTAAAGAATTCTAAAAGATTTTGGG
GGTACCAAAATATTAGGGATAACTAAATTTTTTGGGGGGTACCTGAACCC
TTGAAGACCCTATGCCAGGCTCTAAATAGATGGATAAAACTCACCTTAAG
AAACAGGAAACTTCCAGCCATTCAATAAACTATGAACCAGCTTCTAATAG
AGATCAGTCTAACTGAAGAAAATGAAGAGAGAAAATACCTTAAGAAGGTC
TGGCATTCCAGGTTTGGATTCATTGAATTCATACCACTGTAATGCAAACT
ATCCAGGACGCCATGAACAAAATAACTGTTATTAGATAACGATAACAATC
GTTTATTTTCTTTTTTGCTGTAGCGATCAACTAGCCTCAGGCTTCCACGC
AACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGCAAGCAAAG
AAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAAGGTATGTA
GTCCTGGTATTGTTATTGTGTTCCTGGTTTCTCAACATTCTAGTAAACTA
AAGACAATGTACTATTTAAGGCACAGAAATGCTTGACGAAAATATAGCTA
ACTTCGAAACCTGGGGCGGAATCGTTCAATATTTGATTATTCTTATTATA
TTACGAACATAAATTATTAGGGTCTCAAAATTAGACCCTTACGGTTGAGA
AAATCTAGCTAAATTTGAGCAGATTTCAGCAAATTGGTGCAAAAAATTTG
AACATTTTGTCCATTTTTGTACGGTGGTGAAATGACCTATTTTGCTTGAA
CCTTAACAAGTATTTTTATTATATGGTCCCTTGGGATTTCAAACCCAGTT
TTTGCCTACTTGGCAAAGCTGGGGAAAATTTTCTAGACTCTTATAAACAG
TTATAAAGTCAACTTTTGAAGATCCTCATTGACAAAAACTAATTGTACCA
TCTGATAGAGCTTGGATAGCAGATCTCCAAAAAGGAGATTTCATTTGTTT
CATTTTGTTTCGACTAAGTCCCCCGAAAATGGATGATACGTCTCTTCAGA
AATGCAAATTTTTATGTCAGTATTTTTGAGAAAACTTTGACGAAAAAAAT
TACTTTCAGCAGACGAATCTCGAAAAGTACTTTCGATTATAGGTATAGTT
TAAAGGGTTTCCATGGTTAGATCTTGAGATATTTGAGTTTGAAATTTTGC
TAATTCAGCGTTTTTCCAGGTTTTTCAGCATTTTTTTTGCATAGTAATTT
TCCTCTTTTGACAAGAAAACTGTCATTTCTGAGATGAAATAGGAGAGAGC
TGTCATGGTCTGAGGAGCCCTCCTTGTCTTTCAGTACCCACCCCCTAAAA
TCGGCTCCTGTAACCATGTTACTGGTCTTATCCCCGTTTGTGTTGACTTA
GCTCTTGGTTTTTATAGAATAGTCTGATCAACCATTTTATTCTCCCATTT
TAGCTTTGGGTTGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCC
TCAACAAATCAAGCGACAAGAGGTATATATTGTTTGCTTTCTTTATATGT
TGATGCTTATTTGCTTCTTTAAAATTTGGAAGGGGAGCTATTCCTCGCGA
TCCATTATTTAAACTGCACCAATCAGGATCAACTAAAAATTTCTTGGCAC
AACTAAACGTTACTCGCAAAACCACACGAACTTTCGTGCAAAATAGTGTA
TTGTTGCCATTACATCTGAGGAGATGTGAAAATTAGAGGCTTAGCACAAA
TGGGTACATTTTAAACGAATGTGGCAATAAATTGCACTTAATCGTGGTGC
CCCTTGGCTAGACAATTCTCAAAATTTTCAAAATTAAATCGTAATATTCG
ACATTTCCACAAATTTTATTCGTGAATCCCAAAGGAATAACCCGAAGTAT
TGTGGTAAGGTGCAGCCTTCGGCTGATAATTTTGATGATTAATTTACAAA
TATAAAGGAATTCATCTAATAATTACAAAACCTTCACTTATAAAACCTAA
CTCTTCATTGAAGATTGAAAACTCAGCCTTCAACCGCTTCAGAGTTCGAT
CGGAAAATATTTGAACTCGATATCCTGTTCTTTTGCAGGCAATCTACGAA
TTATATTGCGGAGAAACAGACATGGTGGAAGACTTGAAACTGCTACAAGA
GGTATAGGTTTTAAATAAATGATTTCTCTTCCCAAAAAGAATTTATACGA
GAAAATATGCTTCTCTCGTAGAAAGTATCGGACAAATTTCAACAAATAAA
TGTTTTAGTTGTCCCTTGAAACTACGGGATAACACCTTTTTATTCAAGCT
GATTCTAGCGTCTGAAACAATTAGTGTCTTTGAATAACTGATGTTGGGAT
ATCGTATTGTGTTATGAACGAAGTAAAGGTCGCATTCCGAATTAGCAGGG
ATTGTTTCTGATGACAGTTCATCTTGTTCGGTGAAGCTGAAAAACTGGAA
TACGGGAGTCTATAAGATTTTCTTCTTCTTAAAATAGCATGAATAGAATG
GAATTTCCGTAAAAAAGATCATTTGATTAAATTCGGATGATTCAATTTAA
AACTCGCCATTATTTCGCTAGTCTTGGAAATTCTTAAGATTTTGATTCTT
TCTAAGTCATTGATGTTCTTGGTGATCTCGTACCTTCTTGTACCCTTCCT
GGTGTGAACAGGGCCTTAATAGATTCACGGAAACTTTTCATCAGAGCTAT
GAAGATGTATGGGTTGACAGCACTGTTCGAAACAGACAACAAATATCGTG
TGTGGTATAAATCGTACTTTAACTTGCAACTACATTGCTTGCAGTAATAC
ATAACGTTCAAGAAAGCGAGTCCCGGAATATAAGAGATCATAAACACAGC
TAGAATAATGAAAAATACGCGCGTTACTCTCTTTTCCTTGATGTAACGCT
GAGCGATTGTTTTACGGTTTGCTGTCAAGGAATCTTCCAAGCGCTTCTTG
AACTCTTCTTCGTTGCTTTTCATGAAGCGATGGACTCCGAAATACACAAA
GGCTATAACAAAAAATCCAATCGCGATTGCACCATAATAAAAACCAGCAA
AGCCATATCTACGGTTGCCGATGAACGTTACCAAGCAACCGACACCGATG
GACAAGACCCAAATAATGATGGATATGACAATACAACGAACCCAGGATAG
CTTGATTCGATATTTCAATGGATGTGTGATTCCCACATAACGATCAATTG
CTAACGCGCATGTGCTGAGAATCACACTAGCCGCTGATGTTATGGTAGTG
CTTTCTTCCAACGGGCTAAAAGTGATATTCAAACCTTTGAGGGAAGTGTA
CATGTAGTAAGCGGTTAGAGGCATGGGCACGGCACCTGCGATGAAGTCAC
ATACTGATAGGTTGACCAAGAAATAATTAAAGGGCGTGTGAAGCTTTTTC
AAAGGATCGCATACCACTACAAGAATGATGAGAAAGTTGCCAACGATTGC
CAGCACTGATAATGCGATGAATGAAATGAAAAGTGCGATCGCTGCGTCTG
AACCTGTGTCTGCATTTGAACAGTCGCTTGTCATGGTATGGTATACTTCA
GAGGTTTTTAGCGAACTGGAAGAAATTCTCACTTTCTTCTCTTGTGATAT
GCATATTTTTTTAACTTTCTTAAAATCGTGTCATGGTATGGGCTGTTTGT
GTTTTTTCAGATCTCATGATGCTAGTCAGTGTTTATTTAAGGATTTTTTG
ACAGCATGATGTAACTTGACAACAAGCGTGTCCTATGAAGAGGCAATTCT
GAATGAAAACCGCATTCAGCGAAATTCCTGGATATCTCGAAGTTAGGAGA
AGCCACTCGGTTGTTTGGGCGTATGGTTGACAGGACCTGACAATTGTGGC
AAACCTCTTGTCAGAAAAATGAAATATCATTGAAACGGTGATTTACCGAA
CAATGAATGATGAGATTTTTCTTTCTATGAAAGAAAACCCTAACGATCTG
CATCGTGCAATTAAAAAACTGTCTGGTTTAGTCCACCACAAGTTATTATT
TAAAGGGGTACTTAATTTAGATGACGTCATTTGATCATTTTATATCTTGT
AAACATTTTAATATTTTAATTCATGTAACGTTTTCCCCGGCGTCCCTGGT
GTTTAATTTTATCGGCAGTGAGAGGGAGGGTGGTGCTAGGTTTTAACACT
TTGATATGACGAGTACTTTCGTGTTCTAGGTTTTTCGGGTTTATTCCATT
CAAATATAACGATACAATATTTTTTTGTTTAGGTTTACTTCAATCCGGTG
GCCAAATTAAAACTTTTGACGGAAGAAGACCTCGCCTCCATCTTCGGAAA
TATTCAAGTTTTGCTACCGTTACACGAGGGTAAGACTCTTTTAATTTTTC
AGCTTACAAACTCTTTAAAACGTAATTTTGCTTTCGCAGGTTGCTCGAGG
TCGTATTTGAGGAGTTTTACCAACATAGCGGTCTCTACCACGTGATTGCA
TGTCGGATCTTTGTGAGCAGTTTGCCTCCATTCTATGATTATTCATCTGT
TGAATTCTTCAACATCATTTGCAGTTCTTTTCATTGCTTCTTTTCGACTT
CTTTTTGTCGGTGACAATGATGTCAAAGTGATCAAGTCTTGTTGTATGCT
TTACTTTCATTCAAACTTGCTCCGTAGTCACAGAGCTTTCCAATGAATCG
ATTACGTTTTTGTTTTTGCTGTGTCATCGTCAAAATAATCAAACAGAGAA
ACCAAAAAGAATCTGAAAAAGAGTCTTTCCCACCGCGTCCGCAAAGATGA
ACAGTTTTGGTAAACTGATTCCATTTTAAGAACACTAAATAGTTCAAACT
TAATGTTAATATATCAAGACATTTACTTTTGTACTGACACACTGAGTCTA
TGTATGCGTTCCCCAAATAATTGGAATGTTCAAACGTGTTCGCCCTTCGT
CTCTGTCTTGTTCTATAGAAATAGATTCTCTTGTTAATCGCCAGCTTGTA
ACAGTGAGGCTTTTTGTAGCCTGTAATACGATACACTTATGTCACGCAGT
CGTGGTGGTGAGCCGACTGAAAAAAGAACTTTCTCAATCTTTACTCCAAA
TGTTTTAAGCTTAATAGGGTGAAATATGTAAACATGTAACGAGTGACGAG
TTCATCTCAACCCGAGAGCTTTTTCTTTTCGCTCGCTATGGGTCGTTTAT
TCATCATTCGCTGTCCCTCTTTTCGGTTTTCTTTCAATAATATTCTCGCA
TACATAAGCTCTTATGAAAGTGTCAAAAATAACTTTATCAGATTCCACAC
ATATCACCACCACTCAGCATTTCAACCGCGGTTCCTTGACCACTATCATT
CCTATCTTTTCATCAAAATATCATGTTTATTTATTTGGGTGTTTACCATT
TTGATCACAAAGATCCATGCATTTTTCTCTAGTGTATCATGAATTAAACG
TATCATAAAGTCTCTCTCTTTGAAATGAGTCATTTTTGCTGCTTTTTGAC
GAAATGTTTTCATAATATGGTCAAAGAAAACAAGAAATGCAAAACCAACA
CCTTGCACTCACCGCCGTCACTTTCAAAGTCAACAAATACTCACAAGTCA
CAACGACGACCCTTTGACGTCATCGTTCAGCCTCAATGCCAAACATAGCA
ACAAATATCCAAACTCTATCTAATGCAAGCATCATCTTTTGGCATTTGCC
CAAATATCTCTATTCGTCATACTCCAATTTAGATACTTGATAAGTTTTTT
TGGATAAAAATCTTTATAATTCTACCTAACATGTCTTTCCTTTCTTATCC
ACTGTTATTGACAATTTCGTCAAGAATTCTTCACTCTGTATTGTTATAGA
TTTGGTGAAACGTTTGGAAGAAGTACGGACGGAGAACGGAAGCATCGAAG
AGATCGGACGAATTTTGACGGAATGGATTCCCACGTTGCGCCCTTACATT
CCGTATTGCGCCAATCAACTACAAATGAAAAACATGCTCCTCCACAAGAC
CAAAGAAAATAAACACTTTTCAGATTTCTTACAAGTAAGCATGACCTTTT
TTCCTTCATTTTTCTTCTCCCGTTTTTTTTCTTCTTTCTTTTCTCCCANC
TTTTTCCTTCATTTTTTCTTCTCCCGTTTTTTTTCTTCTTTCTTTTCTCC
CAAAACTTTGACGACGACCTCAAATTGTGTATTTATTTCAAAACCTGACC
TTTTACGACATCAAGTATGAAAAAACGTGCGGTTGATTCGTATTGTATAA
GGTGTGGTTATTCAATAGACGTGGTTTTGAAGGATAGCAAATAGAGATGG
TTAGTGATAAGATAAGGGATAGGTAATCATATCTTGGTAGACCCTGATTA
ACAAATCATTCGTTGAAAATGTGATGTTAAGCGCCAACGGATTATCGTAC
AATTGAATCAACAAGCCAACGTCTCTTTTGATAATCCTATCTTTCCAACT
GAATAAGCTTTATCAAAATGACTATTAGACTCATCTATGCTCCTATCATT
ACCCTAATCACCAGTTTTTCCTTCCCTTTCTTCATAGAGATGTTTGGAAT
CGCCATTCAGCCGTAAACTAGACCTTTGGTCTTTCTTAGGTAATCATTAT
ATTACTCAAACCCACCTTTCGCCCAATCATCAAACAAATTTACACGCTTT
TTTTTTATAAGAATGGTGTTTTTTCATTTCATCATGGATATTCTTAACTT
TTTGACGAAAATCATCCAAAAATATTCTTACGGTATTCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCATGATG
GTGATATTCTTACCATATTCTTAATTTTTTGGCCATTTTCATCATGGACA
TTCTTATAAAGTGTATTCTTATAAAAAAAAAAGCGTGTACTGTCTTTGCA
CTAGCCTTTTCATTGTAATTTGCTAAGTACTCATTTGACCTGTCTTCCTT
TGCTTGACTTTCACGTTTCATAATCTCTCTTCTCTCCTTTGTATTCATCA
GATTCACCTAGAAGCAAACTGGTGAAATATCCGCTACTTATCTCCAACAT
GCATAAATATGTAAGCTTTTTGTCACTTTTTCTTTCTTTACGCTTATGGG
AGATGACGCATCGTAAAATGACATGTATATGTCTGATGTGTTTAGTGCCC
AAGTGTCAATCCTCTTAACAATGCAAAAAGTGCTTTTCATCATTACTTTT
TAAACCTTCTTTTGTTTTGGTTTTGTTTGTAGACGCCGAAAGAACATCCA
GATAATATCATCTTATACCAAGCAGTAAGTGATGTTTTGTCTAACAAATC
ATACATTTTACTACCCTGTCTCCCCTCTGATAACAGCTGTTTATTTGTCC
CTTTTTTGAAGCTGTAAAATTGATGTGTTTTTTGGTGATGTATCCTTTCA
CTATCACATCATCAGTCTGTCATAGTGTAAATATGATGACATGTGGAGTC
CTTTATTGATAATAAACGGGAATCTCAGGGGTTTCCACCGATTGAGCGTT
TTCTCTACATTTCCTTCTTGTTTTCTTTGCGCTGACTAAATTGGAAAAAT
AACGGCTCATAGTTTTGATATTCTAAATCTCTGACAAGAATCTCAATTAT
GTTGAAGTTCTATAAATAAGTTAAGACACCCCTTCTTCTCTTATATTTGG
TTCGATTAAGGAGATTATTTCAAATTTTTTTCTTCGTCAGATTCAAGAAT
TGGAGGTTATAATAAAAGAGGCAGATAAAGCCACAGGAAAATCGAAGGTA
AAGTTCCTCTTTATCTCTCACTGACCCTTGTAAACAACTCAAACTACTTG
AACCATGTGATTAAAACTCTCCACCGTTTCTTACTTTTAGAGTTCATTCT
ACAAAGACCGCATGTATTTTCTGGACGAAGGAGACCACAGAGAAGCATTA
TCTCAAGCACAAGTCCTTCTTTGTCACGGTTCTCTCAAAAACAAGAATGG
AGGGGTGAGTGGTTAATCCTCGTCCCTGACAACCTCTCTGTAATAAGTCA
GATTTTTCAATCGATCTCTTGCTGTCCATGATGACTTATCACGCGTTATC
AATTAGCTAATTAAGATATATCGAACACAAAATGAGAGCTAATTCTGAAC
CAATATATTTCTTTTTTCAGAAAATCGAAGCGTTTCTCTTTGATACAGTA
TTTCTAATCACGCGGCCCGCTTCACGAAATGGTATGGAAATGTATCAAGT
ATTATCTCAGGTAATTTAGCATTCTCTTTACACGCTTGATTTGCGATGTA
TTAGCACGAGATGATTGAATGGCGCCATCGCTTGTTTACTAGCCTGCACC
AGTCCTTTATAAACATGTTTAGCCCCCAAACTGTGCATTCTTTACAAGAG
AATTTGATTGTAATGAGAATGATTGAGAAGCATCTCTTTGAATGAACTGC
TTGTACGCCAGTGAGAGATAAAAATCACCCATCTTTCTTTCACATTCTTG
ATGGTCTTTATGAAGAGAAATAAAGGTTATAATACTCTTCGAAGTTCATT
CATGATTAACATTTATTTTCGTTGAAAAGCTCACCCTTAATCTTTTTGAG
CTCGGTAAGAAAGAAGTTGATTCGACTGAAAATGTTATTCATTTCTAAGA
CGTCTTAGCTTGCTCTATACTAGCATCATTGTCCAGTGGCACGGTCTATT
CAATCAAAATTCAAACCCTCTTTTGAGAAGCTAATAATTTGTTAAGCTTG
TTAAATCTCTCTATGATGCCTTCACCCAAAATAATTCAAGCTTGTAATTT
TGTACACAATCAAATTTGATGAAATTACTTGCTTTAAAAACTCAATTAAC
AACTCCACTTAATTTAACAAAATTTTGAGCAGCTGGCTCGAAAACCTTTT
TGTCAATTATATCCTAAATGCATTCCTTTTTTCTTTGATCACTTTAGCCT
CTACTCACGAATGACATGGAATATGCCAATGTCAGTGATGGTGAACTCAG
GCTAGGTGGTTCATTTCGATCCAGTCTAACGAAGGGGCCGACAGGTAAGA
AATGAAGTGCGGTTTTTGATGCCTTCTACCGGAAACTGTAACGGTCTTCT
CAATATTTCCGGCGTATTTTTGTATTTTTGTTGTTTGATTGACATTCGAA
AACAAACGTCGTTACAGTGTTGAAAGTTGAGGAGAAAATAATTATGAGAT
TAAAGTCGATCATTAATTCCTTGCAATCTTCTACTCTAAGCATCGATTTA
ACGAAGGAAAAGGGGATTGATCTTGTGAAAGATAATATATTTGCACTGCA
CTGATGTTGTTGGAAGGTTCAATCATTATTGACTCTTACTCTGTTTCAGC
TAAATTTGCATTTCGTGTGAATCCAAAAGAATTAACACGAGGTAAATCCA
TTATATTGCAAGCTAACGACCAACATGACAAAAAACAATGGTTGAACGCT
CTAAGCAAAGTAGCCTCAATGCCAAGCAAAGGTGATCCAAGCTAGATGAG
TAGAGTTGAGAACAGGTGGTGAAATGTGAGGGATGTCTTCGACAAGACAG
TGATGATCTGCTCGATCAATTCGAGCGAATGGCACCCTAAAGGATGCGAT
CGATATCGATTCGTCGACACTGATGAAAATAGACGTCTAACGTCAAGTTA
ATTGCAACTTTGTTCGGGTTCGGGCTTGCTGTCGTACCAATGTAACCGAT
TAAATTAAAAAGACAATTTTTTTTAGAAAACCGTTTTTTAGAAAACCGTT
AAAAAATGTTTTAAAAACTTGGAAAATAATTTTTGATACCAATGCATAAA
ATGGACAATTTTTTTATATGATGACACGTACTCGTATGCTTGTATTTATG
TTGTTTTTTTTTTCGTTCAGTGTGTTGTGTGATTGAGATGAAGACAATTT
TTATCCTGTTTGTCTTTCGCAAGGACTCGCCTATCGGATATATCATAAAA
CCTGTGTGGTTTTGTAGAGTTCTATTTCGCACTTTATGTCGGCTGTTGAA
AGATCATAAGAAAAATATTTGACGACAACCTATACATCATCCGTTTTTCG
ATTCTCGCCCTCCCTTGGGTTTGTTATGATGTATCAAAGTTCGACCTCTC
AAAATAAAGCTTTTCTTTCACCTTTTATTTTTGTATTCGTAATTTTTGTT
AATATTTTTCCCGAATTTTTTCATTACTGTATTTGTTTAAAATTGTCAGA
GAATATTTTTGTACTTTTTTTCCTTCTATTGAAAGAAAATACACTATCCA
GAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001119-exon-sc0000007-1575043694:450919..450956TCONS_00001119-exon-sc0000007-1575043694:450919..450956Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:449064..449183TCONS_00001119-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:448035..448103TCONS_00001119-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:447406..447468TCONS_00001119-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:445228..445324TCONS_00001119-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:443573..443757TCONS_00001119-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:443018..443069TCONS_00001119-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:442397..442455TCONS_00001119-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:442183..442224TCONS_00001119-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:441710..441766TCONS_00001119-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:441503..441616TCONS_00001119-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:441247..441336TCONS_00001119-exon-sc0000007-1575043694:441247..441336Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:440463..440559TCONS_00001119-exon-sc0000007-1575043694:440463..440559Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1575043694:439248..440157TCONS_00001119-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:450919..450956TCONS_00001119-exon-sc0000007-1510915933:450919..450956Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:449064..449183TCONS_00001119-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:448035..448103TCONS_00001119-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:447406..447468TCONS_00001119-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:445228..445324TCONS_00001119-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:443573..443757TCONS_00001119-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:443018..443069TCONS_00001119-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:442397..442455TCONS_00001119-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:442183..442224TCONS_00001119-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:441710..441766TCONS_00001119-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:441503..441616TCONS_00001119-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:441247..441336TCONS_00001119-exon-sc0000007-1510915933:441247..441336Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:440463..440559TCONS_00001119-exon-sc0000007-1510915933:440463..440559Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1510915933:439248..440157TCONS_00001119-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:450919..450956TCONS_00001119-exon-sc0000007-1491911889:450919..450956Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:449064..449183TCONS_00001119-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:448035..448103TCONS_00001119-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:447406..447468TCONS_00001119-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:445228..445324TCONS_00001119-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:443573..443757TCONS_00001119-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:443018..443069TCONS_00001119-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:442397..442455TCONS_00001119-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:442183..442224TCONS_00001119-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:441710..441766TCONS_00001119-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:441503..441616TCONS_00001119-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:441247..441336TCONS_00001119-exon-sc0000007-1491911889:441247..441336Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:440463..440559TCONS_00001119-exon-sc0000007-1491911889:440463..440559Clytia hemisphaericaexon
TCONS_00001119-exon-sc0000007-1491911889:439248..440157TCONS_00001119-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..450956 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.90083	8.39913	2.82051	1.66486	49.0655	36.5539	17.0548	24.4458	6.10561	1.07539	4.08233	1.2425	3.2262	1.1359	2.29133	9.5847e-09	7.50861	6.88786	6.28886	6.46844	6.08335	4.26729	13.5342	7.30144	4.69587	3.62028	0.709287	2.53886	15.5372	16.249
Blast
[Close]
BLAST of TCONS_00001119 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 4.771e-106
Identity = 162/376 (43.09%), Postives = 245/376 (65.16%), Query Frame = 3 
Query:   99 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQPLLTNDMEYANVSDGELRLGGSFRSSLTKGPTAKFAFRVNPKELTRGKSIILQANDQHDKKQWLNAL-SKVASMPSKGDP 1223
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  QP+   ++   ++ DG++R+GGSFR + +    AK  FR+   + +  +S  LQAND   K+QW N + + +A   S G P
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQQWFNCIRAAIAPFQSAGSP 509
The following BLAST results are available for this feature:
BLAST of TCONS_00001119 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG84.771e-10643.09Neuroepithelial cell-transforming gene 1 protein O... [more]
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