TCONS_00001103 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001103
Unique NameTCONS_00001103
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2965

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001103 ID=TCONS_00001103|Name=TCONS_00001103|organism=Clytia hemisphaerica|type=transcript|length=2965bp
GATCTCCTTCTTCAAACAATGCTCAACGAAGTGTAAACCCATCTTCTGCA
CAATTCAATTAGTCTTCTCTTTGTACTTTGTACTGCATATTCTTCTTTGA
GACACAAACAAATCTGATATCCGGATTTTCAACtgattgtttgttttgtt
tgctGTCTGCCTATCTATGACGTCACAGATAATGTGATGGCTGgcgattt
tgtatttatcttcgGTCTATTTGCTGTTGTTGTTTTCTCGCCATTTAACG
ATGGCCGGCAATTATCGCCTTCAGTAAGTGTACAGCCTACTACGGAAAAT
TGGTTGGAATTGCCAGTTAAAAGTTTGGCGAACATTGTTTCATCACCTTC
ACTaacaaaaagtgcaaatactGTTGTTGGGAATAAAAAATCGTTCGTTC
GAAAGGAGTCCCTGATTCTCAGTAATCCGAAGCCAAGCAATGAGAAAGTC
GATCATTTGTTGTCATTTGctcatcaaaacaaacctgagaATGGTCAGGC
GTTAGCCTCAGAAAACGAATATAAAAATTCAATAGACAGTGTGAATTATG
TTGAAGACCAACAAGAGAGGATGAACGAGGATAGACTACTTGAGCAACAG
GATATGCTCTCATACATGCCCACTGAGGGTTCTTCgcacaaaatgaaaaa
ttcttcttttaatgATGTCGTTTCTGGTACTGGGAGAAGCTCATTTCTTC
ATTATGCGAAACTCTCATCACCTCATAAAAACCATGTAGTGAACAAGACT
TATTTCACTCCTGTGACCCAGCGAGAAAAAGGTCTAAAGAGATTTGAAGA
ATTGTTTTTGAAGAATGGAGCACAGTACGATGGAGTGAACATTTATAAAG
AAACGCCGAAAGACGCGGAAGAGTTTGAGAATCTCGATACTGCTCCCATA
TTAACCGATGGAACGAAAAGAGATGATAGTAACAGTCAGATGGAAGCCGA
AATGGAAGCTCTCCAGCTCAAAATGGAAaagttgaagaagaaaatgaaca
aaTCGAAAAACGGTCGTCAAAGTTGGGTCAATAAAGCATTTGGTAAATTA
AGCCATGGCCATAAAATCGATTCAAGTGACATGAAAAATTTGATGTACAA
ATTGAAGACGCAAGTCATGTCAGAAGACGATTCTATTGATGGAGCGGATG
TCGAGAAAACAGAATCCTCTTTCGATGAAGAAAAATCCACTTCGGAAGCA
CCAGTTGACGacaaactgaaaattcttcTGGCTGAGCAAGAGAAGATTCC
GCCACCGCCATCCAGCAAAGAAAAACGCCCACCCAAAGATGATGAGGAAC
TAATCACCGTCAAACCAACTGCAAAACCAGGAGATGAGTTACCACCACCA
GCTGATATCAAGCCACCCAAACCGCCCAGTATTGAGAAAAGACCGAAACC
AGGCGATGAACAACCACCCCAAACGCTGGTGGACACTCTTCCACCGGTCA
CCAGTGGCTCCACCATGTTCTTCTCGTATGATGATGGCACCCCTAATGGT
CCATCATCATGGCAAAGGTTGAATGGTCGTTGGACATGTGAAGGACGAAA
GCAATCACCAATCAACATCAATACAAACACTGTCATTCAAGATCAAATCG
CTAAAAACATCATCATCAAACAGTTCCCTCCGCATGTCCCCCTGTCCGGT
ATCATCAAAAACAACGGACACGCCCCAACTTTTTCTTTAACCGAGGGCGT
TGCTGTGCGGTTATCGGGCGGAACATTGTTAAATGATTTTTACATGAAGC
AGATTCACTTTCATTTTGGATGCACTGAGAAAACAGGATCGGAACATTTC
ATCGACGGTGTACAATTCCCGCTCGAGATGCATTTGGTGTTTTGGGATAA
TTCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAGACAATGGAATCG
CCGTTGTTGCCATTCTCTTTCAACGAGAAGACATAACAGGAAGTCAACCG
GAAGATTTGACGCCCCTTCATCAAATTACAGGATTGTTGAAAAACATCAG
AGCAGAAGGTGAAGGGTTGGTGATAACGGAAGACTTTGGTGTACAATTCG
ATCAATTGGTTCCTTCCATCAAAGACAGGCAAAAAGCAGACCGAGTGTTT
ATATACAGTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGTG
GATGGTTTACGCCAACACTCCCCACGTAACAAATAAACAGTTGCAAGAAT
TTCGGCAGTTGCGATCGACCAAAGTGAATCGAGAAGGGACGATGTGTGAT
AACTACCGTCCGCTACAAAAGACGTTCGGACGGAAAATTTATTCCAATAT
CATATAAACAATTGATAATTACAATAcaataaacataaacaaatgaTTAG
AAAAAACTGGCAACAAATATAATACCAAATTGGAAAATGAAACGTCGTGT
GTGGAGTAAAGAATTATTAATATGTTGACAATACTGTGAAAGCATAACCC
ATAAAATTTGGAACGTTGGGCGAAGAAATTTGCTGAAAAATTCATCAACG
TATCAACTGCTAAACCGTGTTactattttcatgatttttcattGGTCCGA
GCATCTTAAAATAGATTTCACAGAGTTTTTTGTGTACCGGGCAGCCagaa
tctaacatttttgtAAATCTTCGATGCATATTCTGTAGTTTACGATAATA
TTccatatacgttttgaaaatttccgatCTTATTTCAAGTTTGTACATAA
ATAATACATTTtagtttttaatatttcgtATTTTCCTAGAaatgtataaa
aataaattggTAATAACTTTAAGCCACTTATCTCATCAAAGTCCCAGCCT
TTGTTTCAATACTCCAATCTGAAACAAGAAGAACCGTTtcctttttgtta
aaaaaaatacctaatttcatTTCCCTAAACCAAGATTCAGTTTGCCAAAG
CTAAGATAGCTGAATTTCCTTAAATTTATCATATACTTTACGGGAAgcaa
attttggcgggaaga
Run BLAST on NCBI

protein sequence of TCONS_00001103-protein

>TCONS_00001103-protein ID=TCONS_00001103-protein|Name=TCONS_00001103-protein|organism=Clytia hemisphaerica|type=polypeptide|length=706bp
MAGDFVFIFGLFAVVVFSPFNDGRQLSPSVSVQPTTENWLELPVKSLANI
VSSPSLTKSANTVVGNKKSFVRKESLILSNPKPSNEKVDHLLSFAHQNKP
ENGQALASENEYKNSIDSVNYVEDQQERMNEDRLLEQQDMLSYMPTEGSS
HKMKNSSFNDVVSGTGRSSFLHYAKLSSPHKNHVVNKTYFTPVTQREKGL
KRFEELFLKNGAQYDGVNIYKETPKDAEEFENLDTAPILTDGTKRDDSNS
QMEAEMEALQLKMEKLKKKMNKSKNGRQSWVNKAFGKLSHGHKIDSSDMK
NLMYKLKTQVMSEDDSIDGADVEKTESSFDEEKSTSEAPVDDKLKILLAE
QEKIPPPPSSKEKRPPKDDEELITVKPTAKPGDELPPPADIKPPKPPSIE
KRPKPGDEQPPQTLVDTLPPVTSGSTMFFSYDDGTPNGPSSWQRLNGRWT
CEGRKQSPININTNTVIQDQIAKNIIIKQFPPHVPLSGIIKNNGHAPTFS
LTEGVAVRLSGGTLLNDFYMKQIHFHFGCTEKTGSEHFIDGVQFPLEMHL
VFWDNSTYSTFSQAAKGDNGIAVVAILFQREDITGSQPEDLTPLHQITGL
LKNIRAEGEGLVITEDFGVQFDQLVPSIKDRQKADRVFIYSGSLSTPGCY
ESVTWMVYANTPHVTNKQLQEFRQLRSTKVNREGTMCDNYRPLQKTFGRK
IYSNII
Run BLAST on NCBI

transcript from alignment at sc0000007:257676..261909-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001103 ID=TCONS_00001103|Name=TCONS_00001103|organism=Clytia hemisphaerica|type=transcript|length=4234bp|location=Sequence derived from alignment at sc0000007:257676..261909- (Clytia hemisphaerica)
GATCTCCTTCTTCAAACAATGCTCAACGAAGTGTAAACCCATCTTCTGCA
CAATTCAATTAGTCTTCTCTTTGTACTTTGTACTGCATATTCTTCTTTGA
GACACAAACAAATCTGATATCCGGATTTTCAACTGATTGTTTGTTTTGTT
TGCTGTCTGCCTATCTATGACGTCACAGATAATGTGATGGCTGGCGATTT
TGTATTTATCTTCGGTCTATTTGCTGTTGTTGTTTTCTCGCCATTTAACG
ATGGCCGGCAATTATCGCCTTCAGTAAGTGTACAGCCTACTACGGAAAAT
TGGTTGGAATTGCCAGTTAAAAGTTTGGCGAACATTGTTTCATCACCTTC
ACTAACAAAAAGTGCAAATACTGTTGTTGGGAATAAAAAATCGTTCGTTC
GAAAGGAGTCCCTGATTCTCAGTAATCCGAAGCCAAGCAATGAGAAAGTC
GATCATTTGTTGTCATTTGCTCATCAAAACAAACCTGAGAATGGTCAGGC
GTTAGCCTCAGAAAACGAATATAAAAATTCAATAGACAGTGTGAATTATG
TTGAAGACCAACAAGAGAGGATGAACGAGGATAGACTACTTGAGCAACAG
GATATGCTCTCATACATGCCCACTGAGGGTTCTTCGCACAAAATGAAAAA
TTCTTCTTTTAATGATGTCGTTTCTGGTACTGGGAGAAGCTCATTTCTTC
ATTATGCGAAACTCTCATCACCTCATAAAAACCATGTAGTGAACAAGACT
TATTTCACTCCTGTGACCCAGCGAGAAAAAGGTCTAAAGAGATTTGAAGA
ATTGTTTTTGAAGAATGGAGCACAGTACGATGGAGTGAACATTTATAAAG
AAACGCCGAAAGACGCGGAAGAGTTTGAGAATCTCGATACTGCTCCCATA
TTAACCGATGGAACGAAAAGAGATGATAGTAACAGTCAGATGGAAGCCGA
AATGGAAGCTCTCCAGCTCAAAATGGAAAAGTTGAAGAAGAAAATGAACA
AATCGAAAAACGGTCGTCAAAGTTGGGTCAATAAAGCATTTGGTAAATTA
AGCCATGGCCATAAAATCGATTCAAGTGACATGAAAAATTTGATGTACAA
ATTGAAGACGCAAGTCATGTCAGAAGACGATTCTATTGATGGAGCGGATG
TCGAGAAAACAGAATCCTCTTTCGATGAAGAAAAATCCACTTCGGAAGCA
CCAGTTGACGACAAACTGAAAATTCTTCTGGCTGAGCAAGAGAAGATTCC
GCCACCGCCATCCAGCAAAGAAAAACGCCCACCCAAAGATGATGAGGAAC
TAATCACCGTCAAACCAACTGCAAAACCAGGAGATGAGTTACCACCACCA
GCTGATATCAAGCCACCCAAACCGCCCAGTATTGAGAAAAGACCGAAACC
AGGCGATGAACAACCACCCCAAACGCTGGTGGACACTCTTCCACCGGTCA
CCAGTGGCTCCACCATGTTCTTCTCGTATGATGATGGCACCCCTAATGGT
ATGACGATACCTAAAACCTTTTTAGAGACTCGATTCTGGAACTAAAAAGT
CGACTTTTTAGTAACTACAGATTACAGTCCAACCTGTTTCCACCATTTCT
CTTTCGAGGAGATGATACTGTTATGGGCTCCCTGATAAGCTCTTTACTAA
CGTATTTTAATGATCTCTTATACGTTTCAGGTCCATCATCATGGCAAAGG
TTGAATGGTCGTTGGACATGTGAAGGACGAAAGCAATCACCAATCAACAT
CAATACAAACACTGTCATTCAAGATCAAATCGCTAAAAACATCATCATCA
AACAGTTCCCTCCGCATGTCCCCCTGTCCGGTATCATCAAAAACAACGGA
CACGCCCCAACTTTTTCTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGG
CGGAACATTGTTAAATGATTTTTACATGAAGCAGATTCACTTTCATTTTG
GATGCACTGAGAAAACAGGATCGGAACATTTCATCGACGGTGTACAATTC
CCGCTCGAGGTTTGTCTTTCTTTGACCATTTTGGGATATCATGGGTGATT
AAAGAACTCTTGCTTGATTTGTCTCTCTTTCCTTTAACGCTTAACGCCCT
AGAATCTTCACAAAAATAAAAAGCATTGTACAATGCACTTTCGAATCTAC
GAAATTGGGCAATACACCCCTGTCTTAGTGACCTGGTGAGAATATTTTGA
AGGAGCTGGATGCCCATTGAAATGCAAATCTTGATGTTTTGAATGAAAAT
CTGAAATTTTCATGTGTGATTGTTTCCCACCAGGATGATTGTTCCCGCCT
ACTCTAATCACAAGTATCATCTTACCTATAATAAAAGTCTTCTGTTTTTC
AGATGCATTTGGTGTTTTGGGATAATTCCACTTACTCGACATTTTCACAA
GCAGCCAAAGGAGACAATGGAATCGCCGTTGTTGCCATTCTCTTTCAAGT
AAGGGAGTATTATATTTATAAACGTTTTCTTGATATAACAACACATTTCA
AACCTGACAGTTCCAAAAGGGATGATTTCTCCTTATAGGGAGGGCTTTCC
TTACTAAATAAACAAGGATGGATCATCACATCAAAATATAAACCATCGAT
GTATCTTTTACTTAGCGAGAAGACATAACAGGAAGTCAACCGGAAGATTT
GACGCCCCTTCATCAAATTACAGGATTGTTGAAAAACATCAGAGCAGAAG
GTCAGTGTTTTGAAGAATCAATTGTTTTTGTGCGTTCTAGGTGGTGAAAT
GTTCAATACAAGGTTGNAAGGTCAGTGTTTTGAAGAATCAATTGTTTTTG
TGCGTTCTAGGTGGTGAAATGTTCAATACAAGGTTGTGGGTTGACCCGAC
CGGGTCAAACCGAAGATTCTCAAATTGTACTTGATGCCTCTCTGCTTGAT
GCTCAGCAATTAAGAGAAAGATCAAGGATAAGTGGAGCAATCCAGGGAGA
AAGAGTTGCGCCCTCCCCTACCTTCGGGTAAATAGCTATCGAAAAAGGAG
CCTTCGGGTCGCCAACGACTGCGGCCGAGAACTTACTCTGATGTAATGTT
CATCCTGAAAACTGTTGCATGTATATTTATAACTTGTCTTATAGGTGAAG
GGTTGGTGATAACGGAAGACTTTGGTGTACAATTCGATCAATTGGTTCCT
TCCATCAAAGACAGGCAAAAAGCAGACCGAGTGTTTATATACAGTGGTTC
GTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGTGGATGGTTTACGCCA
ACACTCCCCACGTAACAAATAAACAGGTATGGAAAGTTAACAACTGATAA
CCAATTATTTTTTCAAAAAGCTTCCTTGGGAAAATGCGTAACTTTGCTCA
AAGAAACAAAATTCTAATTAAATAATTCTCAGGCCAAAGGAAATCAGTGC
AAGTTTAGTTTTGAAAATTAATTCGCAATTTACAGTTTGGACTTATTTCA
TTCTTTCAGTTGCAAGAATTTCGGCAGTTGCGATCGACCAAAGTGAATCG
AGAAGGGACGATGTGTGATAACTACCGTCCGCTACAAAAGACGTTCGGAC
GGAAAATTTATTCCAATATCATATAAACAATTGATAATTACAATACAATA
AACATAAACAAATGATTAGAAAAAACTGGCAACAAATATAATACCAAATT
GGAAAATGAAACGTCGTGTGTGGAGTAAAGAATTATTAATATGTTGACAA
TACTGTGAAAGCATAACCCATAAAATTTGGAACGTTGGGCGAAGAAATTT
GCTGAAAAATTCATCAACGTATCAACTGCTAAACCGTGTTACTATTTTCA
TGATTTTTCATTGGTCCGAGCATCTTAAAATAGATTTCACAGAGTTTTTT
GTGTACCGGGCAGCCAGAATCTAACATTTTTGTAAATCTTCGATGCATAT
TCTGTAGTTTACGATAATATTCCATATACGTTTTGAAAATTTCCGATCTT
ATTTCAAGTTTGTACATAAATAATACATTTTAGTTTTTAATATTTCGTAT
TTTCCTAGAAATGTATAAAAATAAATTGGTAATAACTTTAAGCCACTTAT
CTCATCAAAGTCCCAGCCTTTGTTTCAATACTCCAATCTGAAACAAGAAG
AACCGTTTCCTTTTTGTTAAAAAAAATACCTAATTTCATTTCCCTAAACC
AAGATTCAGTTTGCCAAAGCTAAGATAGCTGAATTTCCTTAAATTTATCA
TATACTTTACGGGAAGCAAATTTTGGCGGGAAGA

Coding sequence (CDS) from alignment at sc0000007:257676..261909-

>TCONS_00001103 ID=TCONS_00001103|Name=TCONS_00001103|organism=Clytia hemisphaerica|type=CDS|length=12726bp|location=Sequence derived from alignment at sc0000007:257676..261909- (Clytia hemisphaerica)
TTGCAAGAATTTCGGCAGTTGCGATCGACCAAAGTGAATCGAGAAGGGAC
GATGTGTGATAACTACCGTCCGCTACAAAAGACGTTCGGACGGAAAATTT
ATTCCAATATCATATAAGTGAAGGGTTGGTGATAACGGAAGACTTTGGTG
TACAATTCGATCAATTGGTTCCTTCCATCAAAGACAGGCAAAAAGCAGAC
CGAGTGTTTATATACAGTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTC
AGTCACGTGGATGGTTTACGCCAACACTCCCCACGTAACAAATAAACAGC
GAGAAGACATAACAGGAAGTCAACCGGAAGATTTGACGCCCCTTCATCAA
ATTACAGGATTGTTGAAAAACATCAGAGCAGAAGATGCATTTGGTGTTTT
GGGATAATTCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAGACAAT
GGAATCGCCGTTGTTGCCATTCTCTTTCAAGTCCATCATCATGGCAAAGG
TTGAATGGTCGTTGGACATGTGAAGGACGAAAGCAATCACCAATCAACAT
CAATACAAACACTGTCATTCAAGATCAAATCGCTAAAAACATCATCATCA
AACAGTTCCCTCCGCATGTCCCCCTGTCCGGTATCATCAAAAACAACGGA
CACGCCCCAACTTTTTCTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGG
CGGAACATTGTTAAATGATTTTTACATGAAGCAGATTCACTTTCATTTTG
GATGCACTGAGAAAACAGGATCGGAACATTTCATCGACGGTGTACAATTC
CCGCTCGAGATGGCTGGCGATTTTGTATTTATCTTCGGTCTATTTGCTGT
TGTTGTTTTCTCGCCATTTAACGATGGCCGGCAATTATCGCCTTCAGTAA
GTGTACAGCCTACTACGGAAAATTGGTTGGAATTGCCAGTTAAAAGTTTG
GCGAACATTGTTTCATCACCTTCACTAACAAAAAGTGCAAATACTGTTGT
TGGGAATAAAAAATCGTTCGTTCGAAAGGAGTCCCTGATTCTCAGTAATC
CGAAGCCAAGCAATGAGAAAGTCGATCATTTGTTGTCATTTGCTCATCAA
AACAAACCTGAGAATGGTCAGGCGTTAGCCTCAGAAAACGAATATAAAAA
TTCAATAGACAGTGTGAATTATGTTGAAGACCAACAAGAGAGGATGAACG
AGGATAGACTACTTGAGCAACAGGATATGCTCTCATACATGCCCACTGAG
GGTTCTTCGCACAAAATGAAAAATTCTTCTTTTAATGATGTCGTTTCTGG
TACTGGGAGAAGCTCATTTCTTCATTATGCGAAACTCTCATCACCTCATA
AAAACCATGTAGTGAACAAGACTTATTTCACTCCTGTGACCCAGCGAGAA
AAAGGTCTAAAGAGATTTGAAGAATTGTTTTTGAAGAATGGAGCACAGTA
CGATGGAGTGAACATTTATAAAGAAACGCCGAAAGACGCGGAAGAGTTTG
AGAATCTCGATACTGCTCCCATATTAACCGATGGAACGAAAAGAGATGAT
AGTAACAGTCAGATGGAAGCCGAAATGGAAGCTCTCCAGCTCAAAATGGA
AAAGTTGAAGAAGAAAATGAACAAATCGAAAAACGGTCGTCAAAGTTGGG
TCAATAAAGCATTTGGTAAATTAAGCCATGGCCATAAAATCGATTCAAGT
GACATGAAAAATTTGATGTACAAATTGAAGACGCAAGTCATGTCAGAAGA
CGATTCTATTGATGGAGCGGATGTCGAGAAAACAGAATCCTCTTTCGATG
AAGAAAAATCCACTTCGGAAGCACCAGTTGACGACAAACTGAAAATTCTT
CTGGCTGAGCAAGAGAAGATTCCGCCACCGCCATCCAGCAAAGAAAAACG
CCCACCCAAAGATGATGAGGAACTAATCACCGTCAAACCAACTGCAAAAC
CAGGAGATGAGTTACCACCACCAGCTGATATCAAGCCACCCAAACCGCCC
AGTATTGAGAAAAGACCGAAACCAGGCGATGAACAACCACCCCAAACGCT
GGTGGACACTCTTCCACCGGTCACCAGTGGCTCCACCATGTTCTTCTCGT
ATGATGATGGCACCCCTAATGTTGCAAGAATTTCGGCAGTTGCGATCGAC
CAAAGTGAATCGAGAAGGGACGATGTGTGATAACTACCGTCCGCTACAAA
AGACGTTCGGACGGAAAATTTATTCCAATATCATATAAGTGAAGGGTTGG
TGATAACGGAAGACTTTGGTGTACAATTCGATCAATTGGTTCCTTCCATC
AAAGACAGGCAAAAAGCAGACCGAGTGTTTATATACAGTGGTTCGTTGTC
CACCCCGGGTTGCTACGAGTCAGTCACGTGGATGGTTTACGCCAACACTC
CCCACGTAACAAATAAACAGCGAGAAGACATAACAGGAAGTCAACCGGAA
GATTTGACGCCCCTTCATCAAATTACAGGATTGTTGAAAAACATCAGAGC
AGAAGATGCATTTGGTGTTTTGGGATAATTCCACTTACTCGACATTTTCA
CAAGCAGCCAAAGGAGACAATGGAATCGCCGTTGTTGCCATTCTCTTTCA
AGTCCATCATCATGGCAAAGGTTGAATGGTCGTTGGACATGTGAAGGACG
AAAGCAATCACCAATCAACATCAATACAAACACTGTCATTCAAGATCAAA
TCGCTAAAAACATCATCATCAAACAGTTCCCTCCGCATGTCCCCCTGTCC
GGTATCATCAAAAACAACGGACACGCCCCAACTTTTTCTTTAACCGAGGG
CGTTGCTGTGCGGTTATCGGGCGGAACATTGTTAAATGATTTTTACATGA
AGCAGATTCACTTTCATTTTGGATGCACTGAGAAAACAGGATCGGAACAT
TTCATCGACGGTGTACAATTCCCGCTCGAGATGGCTGGCGATTTTGTATT
TATCTTCGGTCTATTTGCTGTTGTTGTTTTCTCGCCATTTAACGATGGCC
GGCAATTATCGCCTTCAGTAAGTGTACAGCCTACTACGGAAAATTGGTTG
GAATTGCCAGTTAAAAGTTTGGCGAACATTGTTTCATCACCTTCACTAAC
AAAAAGTGCAAATACTGTTGTTGGGAATAAAAAATCGTTCGTTCGAAAGG
AGTCCCTGATTCTCAGTAATCCGAAGCCAAGCAATGAGAAAGTCGATCAT
TTGTTGTCATTTGCTCATCAAAACAAACCTGAGAATGGTCAGGCGTTAGC
CTCAGAAAACGAATATAAAAATTCAATAGACAGTGTGAATTATGTTGAAG
ACCAACAAGAGAGGATGAACGAGGATAGACTACTTGAGCAACAGGATATG
CTCTCATACATGCCCACTGAGGGTTCTTCGCACAAAATGAAAAATTCTTC
TTTTAATGATGTCGTTTCTGGTACTGGGAGAAGCTCATTTCTTCATTATG
CGAAACTCTCATCACCTCATAAAAACCATGTAGTGAACAAGACTTATTTC
ACTCCTGTGACCCAGCGAGAAAAAGGTCTAAAGAGATTTGAAGAATTGTT
TTTGAAGAATGGAGCACAGTACGATGGAGTGAACATTTATAAAGAAACGC
CGAAAGACGCGGAAGAGTTTGAGAATCTCGATACTGCTCCCATATTAACC
GATGGAACGAAAAGAGATGATAGTAACAGTCAGATGGAAGCCGAAATGGA
AGCTCTCCAGCTCAAAATGGAAAAGTTGAAGAAGAAAATGAACAAATCGA
AAAACGGTCGTCAAAGTTGGGTCAATAAAGCATTTGGTAAATTAAGCCAT
GGCCATAAAATCGATTCAAGTGACATGAAAAATTTGATGTACAAATTGAA
GACGCAAGTCATGTCAGAAGACGATTCTATTGATGGAGCGGATGTCGAGA
AAACAGAATCCTCTTTCGATGAAGAAAAATCCACTTCGGAAGCACCAGTT
GACGACAAACTGAAAATTCTTCTGGCTGAGCAAGAGAAGATTCCGCCACC
GCCATCCAGCAAAGAAAAACGCCCACCCAAAGATGATGAGGAACTAATCA
CCGTCAAACCAACTGCAAAACCAGGAGATGAGTTACCACCACCAGCTGAT
ATCAAGCCACCCAAACCGCCCAGTATTGAGAAAAGACCGAAACCAGGCGA
TGAACAACCACCCCAAACGCTGGTGGACACTCTTCCACCGGTCACCAGTG
GCTCCACCATGTTCTTCTCGTATGATGATGGCACCCCTAATGTTGCAAGA
ATTTCGGCAGTTGCGATCGACCAAAGTGAATCGAGAAGGGACGATGTGTG
ATAACTACCGTCCGCTACAAAAGACGTTCGGACGGAAAATTTATTCCAAT
ATCATATAAGTGAAGGGTTGGTGATAACGGAAGACTTTGGTGTACAATTC
GATCAATTGGTTCCTTCCATCAAAGACAGGCAAAAAGCAGACCGAGTGTT
TATATACAGTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGT
GGATGGTTTACGCCAACACTCCCCACGTAACAAATAAACAGCGAGAAGAC
ATAACAGGAAGTCAACCGGAAGATTTGACGCCCCTTCATCAAATTACAGG
ATTGTTGAAAAACATCAGAGCAGAAGATGCATTTGGTGTTTTGGGATAAT
TCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAGACAATGGAATCGC
CGTTGTTGCCATTCTCTTTCAAGTCCATCATCATGGCAAAGGTTGAATGG
TCGTTGGACATGTGAAGGACGAAAGCAATCACCAATCAACATCAATACAA
ACACTGTCATTCAAGATCAAATCGCTAAAAACATCATCATCAAACAGTTC
CCTCCGCATGTCCCCCTGTCCGGTATCATCAAAAACAACGGACACGCCCC
AACTTTTTCTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGGCGGAACAT
TGTTAAATGATTTTTACATGAAGCAGATTCACTTTCATTTTGGATGCACT
GAGAAAACAGGATCGGAACATTTCATCGACGGTGTACAATTCCCGCTCGA
GATGGCTGGCGATTTTGTATTTATCTTCGGTCTATTTGCTGTTGTTGTTT
TCTCGCCATTTAACGATGGCCGGCAATTATCGCCTTCAGTAAGTGTACAG
CCTACTACGGAAAATTGGTTGGAATTGCCAGTTAAAAGTTTGGCGAACAT
TGTTTCATCACCTTCACTAACAAAAAGTGCAAATACTGTTGTTGGGAATA
AAAAATCGTTCGTTCGAAAGGAGTCCCTGATTCTCAGTAATCCGAAGCCA
AGCAATGAGAAAGTCGATCATTTGTTGTCATTTGCTCATCAAAACAAACC
TGAGAATGGTCAGGCGTTAGCCTCAGAAAACGAATATAAAAATTCAATAG
ACAGTGTGAATTATGTTGAAGACCAACAAGAGAGGATGAACGAGGATAGA
CTACTTGAGCAACAGGATATGCTCTCATACATGCCCACTGAGGGTTCTTC
GCACAAAATGAAAAATTCTTCTTTTAATGATGTCGTTTCTGGTACTGGGA
GAAGCTCATTTCTTCATTATGCGAAACTCTCATCACCTCATAAAAACCAT
GTAGTGAACAAGACTTATTTCACTCCTGTGACCCAGCGAGAAAAAGGTCT
AAAGAGATTTGAAGAATTGTTTTTGAAGAATGGAGCACAGTACGATGGAG
TGAACATTTATAAAGAAACGCCGAAAGACGCGGAAGAGTTTGAGAATCTC
GATACTGCTCCCATATTAACCGATGGAACGAAAAGAGATGATAGTAACAG
TCAGATGGAAGCCGAAATGGAAGCTCTCCAGCTCAAAATGGAAAAGTTGA
AGAAGAAAATGAACAAATCGAAAAACGGTCGTCAAAGTTGGGTCAATAAA
GCATTTGGTAAATTAAGCCATGGCCATAAAATCGATTCAAGTGACATGAA
AAATTTGATGTACAAATTGAAGACGCAAGTCATGTCAGAAGACGATTCTA
TTGATGGAGCGGATGTCGAGAAAACAGAATCCTCTTTCGATGAAGAAAAA
TCCACTTCGGAAGCACCAGTTGACGACAAACTGAAAATTCTTCTGGCTGA
GCAAGAGAAGATTCCGCCACCGCCATCCAGCAAAGAAAAACGCCCACCCA
AAGATGATGAGGAACTAATCACCGTCAAACCAACTGCAAAACCAGGAGAT
GAGTTACCACCACCAGCTGATATCAAGCCACCCAAACCGCCCAGTATTGA
GAAAAGACCGAAACCAGGCGATGAACAACCACCCCAAACGCTGGTGGACA
CTCTTCCACCGGTCACCAGTGGCTCCACCATGTTCTTCTCGTATGATGAT
GGCACCCCTAATGTTGCAAGAATTTCGGCAGTTGCGATCGACCAAAGTGA
ATCGAGAAGGGACGATGTGTGATAACTACCGTCCGCTACAAAAGACGTTC
GGACGGAAAATTTATTCCAATATCATATAAGTGAAGGGTTGGTGATAACG
GAAGACTTTGGTGTACAATTCGATCAATTGGTTCCTTCCATCAAAGACAG
GCAAAAAGCAGACCGAGTGTTTATATACAGTGGTTCGTTGTCCACCCCGG
GTTGCTACGAGTCAGTCACGTGGATGGTTTACGCCAACACTCCCCACGTA
ACAAATAAACAGCGAGAAGACATAACAGGAAGTCAACCGGAAGATTTGAC
GCCCCTTCATCAAATTACAGGATTGTTGAAAAACATCAGAGCAGAAGATG
CATTTGGTGTTTTGGGATAATTCCACTTACTCGACATTTTCACAAGCAGC
CAAAGGAGACAATGGAATCGCCGTTGTTGCCATTCTCTTTCAAGTCCATC
ATCATGGCAAAGGTTGAATGGTCGTTGGACATGTGAAGGACGAAAGCAAT
CACCAATCAACATCAATACAAACACTGTCATTCAAGATCAAATCGCTAAA
AACATCATCATCAAACAGTTCCCTCCGCATGTCCCCCTGTCCGGTATCAT
CAAAAACAACGGACACGCCCCAACTTTTTCTTTAACCGAGGGCGTTGCTG
TGCGGTTATCGGGCGGAACATTGTTAAATGATTTTTACATGAAGCAGATT
CACTTTCATTTTGGATGCACTGAGAAAACAGGATCGGAACATTTCATCGA
CGGTGTACAATTCCCGCTCGAGATGGCTGGCGATTTTGTATTTATCTTCG
GTCTATTTGCTGTTGTTGTTTTCTCGCCATTTAACGATGGCCGGCAATTA
TCGCCTTCAGTAAGTGTACAGCCTACTACGGAAAATTGGTTGGAATTGCC
AGTTAAAAGTTTGGCGAACATTGTTTCATCACCTTCACTAACAAAAAGTG
CAAATACTGTTGTTGGGAATAAAAAATCGTTCGTTCGAAAGGAGTCCCTG
ATTCTCAGTAATCCGAAGCCAAGCAATGAGAAAGTCGATCATTTGTTGTC
ATTTGCTCATCAAAACAAACCTGAGAATGGTCAGGCGTTAGCCTCAGAAA
ACGAATATAAAAATTCAATAGACAGTGTGAATTATGTTGAAGACCAACAA
GAGAGGATGAACGAGGATAGACTACTTGAGCAACAGGATATGCTCTCATA
CATGCCCACTGAGGGTTCTTCGCACAAAATGAAAAATTCTTCTTTTAATG
ATGTCGTTTCTGGTACTGGGAGAAGCTCATTTCTTCATTATGCGAAACTC
TCATCACCTCATAAAAACCATGTAGTGAACAAGACTTATTTCACTCCTGT
GACCCAGCGAGAAAAAGGTCTAAAGAGATTTGAAGAATTGTTTTTGAAGA
ATGGAGCACAGTACGATGGAGTGAACATTTATAAAGAAACGCCGAAAGAC
GCGGAAGAGTTTGAGAATCTCGATACTGCTCCCATATTAACCGATGGAAC
GAAAAGAGATGATAGTAACAGTCAGATGGAAGCCGAAATGGAAGCTCTCC
AGCTCAAAATGGAAAAGTTGAAGAAGAAAATGAACAAATCGAAAAACGGT
CGTCAAAGTTGGGTCAATAAAGCATTTGGTAAATTAAGCCATGGCCATAA
AATCGATTCAAGTGACATGAAAAATTTGATGTACAAATTGAAGACGCAAG
TCATGTCAGAAGACGATTCTATTGATGGAGCGGATGTCGAGAAAACAGAA
TCCTCTTTCGATGAAGAAAAATCCACTTCGGAAGCACCAGTTGACGACAA
ACTGAAAATTCTTCTGGCTGAGCAAGAGAAGATTCCGCCACCGCCATCCA
GCAAAGAAAAACGCCCACCCAAAGATGATGAGGAACTAATCACCGTCAAA
CCAACTGCAAAACCAGGAGATGAGTTACCACCACCAGCTGATATCAAGCC
ACCCAAACCGCCCAGTATTGAGAAAAGACCGAAACCAGGCGATGAACAAC
CACCCCAAACGCTGGTGGACACTCTTCCACCGGTCACCAGTGGCTCCACC
ATGTTCTTCTCGTATGATGATGGCACCCCTAATGTTGCAAGAATTTCGGC
AGTTGCGATCGACCAAAGTGAATCGAGAAGGGACGATGTGTGATAACTAC
CGTCCGCTACAAAAGACGTTCGGACGGAAAATTTATTCCAATATCATATA
AGTGAAGGGTTGGTGATAACGGAAGACTTTGGTGTACAATTCGATCAATT
GGTTCCTTCCATCAAAGACAGGCAAAAAGCAGACCGAGTGTTTATATACA
GTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGTGGATGGTT
TACGCCAACACTCCCCACGTAACAAATAAACAGCGAGAAGACATAACAGG
AAGTCAACCGGAAGATTTGACGCCCCTTCATCAAATTACAGGATTGTTGA
AAAACATCAGAGCAGAAGATGCATTTGGTGTTTTGGGATAATTCCACTTA
CTCGACATTTTCACAAGCAGCCAAAGGAGACAATGGAATCGCCGTTGTTG
CCATTCTCTTTCAAGTCCATCATCATGGCAAAGGTTGAATGGTCGTTGGA
CATGTGAAGGACGAAAGCAATCACCAATCAACATCAATACAAACACTGTC
ATTCAAGATCAAATCGCTAAAAACATCATCATCAAACAGTTCCCTCCGCA
TGTCCCCCTGTCCGGTATCATCAAAAACAACGGACACGCCCCAACTTTTT
CTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGGCGGAACATTGTTAAAT
GATTTTTACATGAAGCAGATTCACTTTCATTTTGGATGCACTGAGAAAAC
AGGATCGGAACATTTCATCGACGGTGTACAATTCCCGCTCGAGATGGCTG
GCGATTTTGTATTTATCTTCGGTCTATTTGCTGTTGTTGTTTTCTCGCCA
TTTAACGATGGCCGGCAATTATCGCCTTCAGTAAGTGTACAGCCTACTAC
GGAAAATTGGTTGGAATTGCCAGTTAAAAGTTTGGCGAACATTGTTTCAT
CACCTTCACTAACAAAAAGTGCAAATACTGTTGTTGGGAATAAAAAATCG
TTCGTTCGAAAGGAGTCCCTGATTCTCAGTAATCCGAAGCCAAGCAATGA
GAAAGTCGATCATTTGTTGTCATTTGCTCATCAAAACAAACCTGAGAATG
GTCAGGCGTTAGCCTCAGAAAACGAATATAAAAATTCAATAGACAGTGTG
AATTATGTTGAAGACCAACAAGAGAGGATGAACGAGGATAGACTACTTGA
GCAACAGGATATGCTCTCATACATGCCCACTGAGGGTTCTTCGCACAAAA
TGAAAAATTCTTCTTTTAATGATGTCGTTTCTGGTACTGGGAGAAGCTCA
TTTCTTCATTATGCGAAACTCTCATCACCTCATAAAAACCATGTAGTGAA
CAAGACTTATTTCACTCCTGTGACCCAGCGAGAAAAAGGTCTAAAGAGAT
TTGAAGAATTGTTTTTGAAGAATGGAGCACAGTACGATGGAGTGAACATT
TATAAAGAAACGCCGAAAGACGCGGAAGAGTTTGAGAATCTCGATACTGC
TCCCATATTAACCGATGGAACGAAAAGAGATGATAGTAACAGTCAGATGG
AAGCCGAAATGGAAGCTCTCCAGCTCAAAATGGAAAAGTTGAAGAAGAAA
ATGAACAAATCGAAAAACGGTCGTCAAAGTTGGGTCAATAAAGCATTTGG
TAAATTAAGCCATGGCCATAAAATCGATTCAAGTGACATGAAAAATTTGA
TGTACAAATTGAAGACGCAAGTCATGTCAGAAGACGATTCTATTGATGGA
GCGGATGTCGAGAAAACAGAATCCTCTTTCGATGAAGAAAAATCCACTTC
GGAAGCACCAGTTGACGACAAACTGAAAATTCTTCTGGCTGAGCAAGAGA
AGATTCCGCCACCGCCATCCAGCAAAGAAAAACGCCCACCCAAAGATGAT
GAGGAACTAATCACCGTCAAACCAACTGCAAAACCAGGAGATGAGTTACC
ACCACCAGCTGATATCAAGCCACCCAAACCGCCCAGTATTGAGAAAAGAC
CGAAACCAGGCGATGAACAACCACCCCAAACGCTGGTGGACACTCTTCCA
CCGGTCACCAGTGGCTCCACCATGTTCTTCTCGTATGATGATGGCACCCC
TAATGTTGCAAGAATTTCGGCAGTTGCGATCGACCAAAGTGAATCGAGAA
GGGACGATGTGTGATAACTACCGTCCGCTACAAAAGACGTTCGGACGGAA
AATTTATTCCAATATCATATAAGTGAAGGGTTGGTGATAACGGAAGACTT
TGGTGTACAATTCGATCAATTGGTTCCTTCCATCAAAGACAGGCAAAAAG
CAGACCGAGTGTTTATATACAGTGGTTCGTTGTCCACCCCGGGTTGCTAC
GAGTCAGTCACGTGGATGGTTTACGCCAACACTCCCCACGTAACAAATAA
ACAGCGAGAAGACATAACAGGAAGTCAACCGGAAGATTTGACGCCCCTTC
ATCAAATTACAGGATTGTTGAAAAACATCAGAGCAGAAGATGCATTTGGT
GTTTTGGGATAATTCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAG
ACAATGGAATCGCCGTTGTTGCCATTCTCTTTCAAGTCCATCATCATGGC
AAAGGTTGAATGGTCGTTGGACATGTGAAGGACGAAAGCAATCACCAATC
AACATCAATACAAACACTGTCATTCAAGATCAAATCGCTAAAAACATCAT
CATCAAACAGTTCCCTCCGCATGTCCCCCTGTCCGGTATCATCAAAAACA
ACGGACACGCCCCAACTTTTTCTTTAACCGAGGGCGTTGCTGTGCGGTTA
TCGGGCGGAACATTGTTAAATGATTTTTACATGAAGCAGATTCACTTTCA
TTTTGGATGCACTGAGAAAACAGGATCGGAACATTTCATCGACGGTGTAC
AATTCCCGCTCGAGATGGCTGGCGATTTTGTATTTATCTTCGGTCTATTT
GCTGTTGTTGTTTTCTCGCCATTTAACGATGGCCGGCAATTATCGCCTTC
AGTAAGTGTACAGCCTACTACGGAAAATTGGTTGGAATTGCCAGTTAAAA
GTTTGGCGAACATTGTTTCATCACCTTCACTAACAAAAAGTGCAAATACT
GTTGTTGGGAATAAAAAATCGTTCGTTCGAAAGGAGTCCCTGATTCTCAG
TAATCCGAAGCCAAGCAATGAGAAAGTCGATCATTTGTTGTCATTTGCTC
ATCAAAACAAACCTGAGAATGGTCAGGCGTTAGCCTCAGAAAACGAATAT
AAAAATTCAATAGACAGTGTGAATTATGTTGAAGACCAACAAGAGAGGAT
GAACGAGGATAGACTACTTGAGCAACAGGATATGCTCTCATACATGCCCA
CTGAGGGTTCTTCGCACAAAATGAAAAATTCTTCTTTTAATGATGTCGTT
TCTGGTACTGGGAGAAGCTCATTTCTTCATTATGCGAAACTCTCATCACC
TCATAAAAACCATGTAGTGAACAAGACTTATTTCACTCCTGTGACCCAGC
GAGAAAAAGGTCTAAAGAGATTTGAAGAATTGTTTTTGAAGAATGGAGCA
CAGTACGATGGAGTGAACATTTATAAAGAAACGCCGAAAGACGCGGAAGA
GTTTGAGAATCTCGATACTGCTCCCATATTAACCGATGGAACGAAAAGAG
ATGATAGTAACAGTCAGATGGAAGCCGAAATGGAAGCTCTCCAGCTCAAA
ATGGAAAAGTTGAAGAAGAAAATGAACAAATCGAAAAACGGTCGTCAAAG
TTGGGTCAATAAAGCATTTGGTAAATTAAGCCATGGCCATAAAATCGATT
CAAGTGACATGAAAAATTTGATGTACAAATTGAAGACGCAAGTCATGTCA
GAAGACGATTCTATTGATGGAGCGGATGTCGAGAAAACAGAATCCTCTTT
CGATGAAGAAAAATCCACTTCGGAAGCACCAGTTGACGACAAACTGAAAA
TTCTTCTGGCTGAGCAAGAGAAGATTCCGCCACCGCCATCCAGCAAAGAA
AAACGCCCACCCAAAGATGATGAGGAACTAATCACCGTCAAACCAACTGC
AAAACCAGGAGATGAGTTACCACCACCAGCTGATATCAAGCCACCCAAAC
CGCCCAGTATTGAGAAAAGACCGAAACCAGGCGATGAACAACCACCCCAA
ACGCTGGTGGACACTCTTCCACCGGTCACCAGTGGCTCCACCATGTTCTT
CTCGTATGATGATGGCACCCCTAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000620XLOC_000620Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001103-proteinTCONS_00001103-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001103-exon-sc0000007-1575043694:260412..261909TCONS_00001103-exon-sc0000007-1575043694:260412..261909Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1575043694:259901..260229TCONS_00001103-exon-sc0000007-1575043694:259901..260229Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1575043694:259462..259557TCONS_00001103-exon-sc0000007-1575043694:259462..259557Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1575043694:259210..259294TCONS_00001103-exon-sc0000007-1575043694:259210..259294Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1575043694:258634..258815TCONS_00001103-exon-sc0000007-1575043694:258634..258815Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1575043694:257676..258450TCONS_00001103-exon-sc0000007-1575043694:257676..258450Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1510915933:260412..261909TCONS_00001103-exon-sc0000007-1510915933:260412..261909Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1510915933:259901..260229TCONS_00001103-exon-sc0000007-1510915933:259901..260229Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1510915933:259462..259557TCONS_00001103-exon-sc0000007-1510915933:259462..259557Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1510915933:259210..259294TCONS_00001103-exon-sc0000007-1510915933:259210..259294Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1510915933:258634..258815TCONS_00001103-exon-sc0000007-1510915933:258634..258815Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1510915933:257676..258450TCONS_00001103-exon-sc0000007-1510915933:257676..258450Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1491911889:260412..261909TCONS_00001103-exon-sc0000007-1491911889:260412..261909Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1491911889:259901..260229TCONS_00001103-exon-sc0000007-1491911889:259901..260229Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1491911889:259462..259557TCONS_00001103-exon-sc0000007-1491911889:259462..259557Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1491911889:259210..259294TCONS_00001103-exon-sc0000007-1491911889:259210..259294Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1491911889:258634..258815TCONS_00001103-exon-sc0000007-1491911889:258634..258815Clytia hemisphaericaexon
TCONS_00001103-exon-sc0000007-1491911889:257676..258450TCONS_00001103-exon-sc0000007-1491911889:257676..258450Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:257676..261909 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.107718	0.0260713	0.0152391	0.0296639	0.410756	0.246646	1.1387	1.16399	0.34898	0.196076	0.325844	1.45769	5.43297	4.40274	3.47658	9.25663	1.92945	2.6231	0.114104	0.0738798	1.89409	1.14161	1.12309	1.20466	2.05247	2.83524	0.335281	0.139725	0.0750406	0.10783
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001148Carbonic_anhydrase_a
IPR018338Carbonic_anhydrase_a-class_CS
Vocabulary: Molecular Function
TermDefinition
GO:0004089carbonate dehydratase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006730one-carbon metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006730 one-carbon metabolic process
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00001103 vs. Swiss-Prot (Human)
Match: CAH13 (Carbonic anhydrase 13 OS=Homo sapiens GN=CA13 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.879e-32
Identity = 89/269 (33.09%), Postives = 134/269 (49.81%), Query Frame = 1 
Query: 1495 NGPSSWQRLNGRWTCEGRKQSPININTNTVIQDQIAKNIIIKQFPPHVPLSGIIKNNGHAPT--FSLTEGVAVRLSGGTLLNDFYMKQIHFHFGCTEKTGSEHFIDGVQFPLEMHLVFWDNSTYSTFSQAAKGDNGIAVVAILFQREDITGSQPEDLTPLHQITGLLKNIRAEGEGLVITEDFGVQFD--QLVPSIKDRQKADRVFIYSGSLSTPGCYESVTWMVYANTPHVTNKQLQEFRQLRSTKVNREGT-MCDNYRPLQKTFGRK 2286
            NGP  W+        +G +QSPI I T  V  D   + + IK  P     + II N+GH+    F  TE  +V L GG L   + ++Q+H H+G  +  GSEH +DGV +  E+H+V W++  Y +F +AA   +G+AV+ +  Q         E  + L +IT  L +I+ +G+    T      FD   L+P   D       + Y GSL+ P   ESVTW+V     +++++QL +FR L  T        +  N+RP Q   GRK
Sbjct:   12 NGPIHWKEFFP--IADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSS---AKIISNSGHSFNVDFDDTENKSV-LRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAAELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIG-------EPNSQLQKITDTLDSIKEKGKQTRFT-----NFDLLSLLPPSWD------YWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSNHRPPQPLKGRK 256
The following BLAST results are available for this feature:
BLAST of TCONS_00001103 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAH139.879e-3233.09Carbonic anhydrase 13 OS=Homo sapiens GN=CA13 PE=1... [more]
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