TCONS_00001103-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001103-protein
Unique NameTCONS_00001103-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length706

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001103-protein ID=TCONS_00001103-protein|Name=TCONS_00001103-protein|organism=Clytia hemisphaerica|type=polypeptide|length=706bp
MAGDFVFIFGLFAVVVFSPFNDGRQLSPSVSVQPTTENWLELPVKSLANI
VSSPSLTKSANTVVGNKKSFVRKESLILSNPKPSNEKVDHLLSFAHQNKP
ENGQALASENEYKNSIDSVNYVEDQQERMNEDRLLEQQDMLSYMPTEGSS
HKMKNSSFNDVVSGTGRSSFLHYAKLSSPHKNHVVNKTYFTPVTQREKGL
KRFEELFLKNGAQYDGVNIYKETPKDAEEFENLDTAPILTDGTKRDDSNS
QMEAEMEALQLKMEKLKKKMNKSKNGRQSWVNKAFGKLSHGHKIDSSDMK
NLMYKLKTQVMSEDDSIDGADVEKTESSFDEEKSTSEAPVDDKLKILLAE
QEKIPPPPSSKEKRPPKDDEELITVKPTAKPGDELPPPADIKPPKPPSIE
KRPKPGDEQPPQTLVDTLPPVTSGSTMFFSYDDGTPNGPSSWQRLNGRWT
CEGRKQSPININTNTVIQDQIAKNIIIKQFPPHVPLSGIIKNNGHAPTFS
LTEGVAVRLSGGTLLNDFYMKQIHFHFGCTEKTGSEHFIDGVQFPLEMHL
VFWDNSTYSTFSQAAKGDNGIAVVAILFQREDITGSQPEDLTPLHQITGL
LKNIRAEGEGLVITEDFGVQFDQLVPSIKDRQKADRVFIYSGSLSTPGCY
ESVTWMVYANTPHVTNKQLQEFRQLRSTKVNREGTMCDNYRPLQKTFGRK
IYSNII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000620XLOC_000620Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001103TCONS_00001103Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001148Carbonic_anhydrase_a
IPR018338Carbonic_anhydrase_a-class_CS
Vocabulary: Molecular Function
TermDefinition
GO:0004089carbonate dehydratase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006730one-carbon metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006730 one-carbon metabolic process
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..427
NoneNo IPR availableCDDcd00326alpha_CAcoord: 453..702
e-value: 3.76917E-60
score: 202.128
IPR001148Alpha carbonic anhydraseSMARTSM01057Carb_anhydrase_2acoord: 429..705
e-value: 2.8E-66
score: 236.2
IPR001148Alpha carbonic anhydraseGENE3D3.10.200.10coord: 422..704
e-value: 1.1E-66
score: 224.6
IPR001148Alpha carbonic anhydrasePFAMPF00194Carb_anhydrasecoord: 430..704
e-value: 5.6E-64
score: 216.0
IPR001148Alpha carbonic anhydrasePROSITEPS51144ALPHA_CA_2coord: 427..705
score: 57.624
IPR001148Alpha carbonic anhydraseSUPERFAMILY51069Carbonic anhydrasecoord: 429..703
IPR018338Carbonic anhydrase, alpha-class, conserved sitePROSITEPS00162ALPHA_CA_1coord: 535..551

Blast
[Close]
BLAST of TCONS_00001103-protein vs. Swiss-Prot (Human)
Match: CAH13 (Carbonic anhydrase 13 OS=Homo sapiens GN=CA13 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.097e-33
Identity = 89/274 (32.48%), Postives = 137/274 (50.00%), Query Frame = 0 
Query:  437 NGPSSWQRLNGRWTCEGRKQSPININTNTVIQDQIAKNIIIKQFPPHVPLSGIIKNNGHA--PTFSLTEGVAVRLSGGTLLNDFYMKQIHFHFGCTEKTGSEHFIDGVQFPLEMHLVFWDNSTYSTFSQAAKGDNGIAVVAILFQREDITGSQPEDLTPLHQITGLLKNIRAEGEGLVITEDFGVQFD--QLVPSIKDRQKADRVFIYSGSLSTPGCYESVTWMVYANTPHVTNKQLQEFRQLRSTKVNREGT-MCDNYRPLQKTFGRKIYSNI 705
            NGP  W+        +G +QSPI I T  V  D   + + IK  P     + II N+GH+    F  TE  +V L GG L   + ++Q+H H+G  +  GSEH +DGV +  E+H+V W++  Y +F +AA   +G+AV+ +  Q         E  + L +IT  L +I+ +G+    T      FD   L+P   D       + Y GSL+ P   ESVTW+V     +++++QL +FR L  T        +  N+RP Q   GRK+ ++ 
Sbjct:   12 NGPIHWKEFFP--IADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSS---AKIISNSGHSFNVDFDDTENKSV-LRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAAELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIG-------EPNSQLQKITDTLDSIKEKGKQTRFT-----NFDLLSLLPPSWD------YWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSNHRPPQPLKGRKVRASF 261
The following BLAST results are available for this feature:
BLAST of TCONS_00001103-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAH137.097e-3332.48Carbonic anhydrase 13 OS=Homo sapiens GN=CA13 PE=1... [more]
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