TCONS_00001056 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001056
Unique NameTCONS_00001056
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1248

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001056 ID=TCONS_00001056|Name=TCONS_00001056|organism=Clytia hemisphaerica|type=transcript|length=1248bp
CTCACGCGTGTCTATATcgtatcaaaaaaaattatttttcaattctcTTA
TGAATCGAACCTTCTTCAATAAGATTTTCGACCTTCTTTGTTCTTCCTTT
ATGGCTCGTAGTAAAGGAGGTGGATTTTATGCTGTTAAGCGTGGCAGGAA
TATTGGAATTTACATGACATGGGCAGAATGTGAAAGTCAAGTAAAGGGTT
TTCATGGCGCAAGGTTTCATCCAGCAATTCTTCACTTGGTGTTAGAAGAA
CACAGACTTTTAAAGCAAAGTCACAAAACACTGcctTTCCAGGATCTGTT
ACAGCTCTATCTAAAAGAACCAAATTGATAGAAGCTAGAAGTTTGTCAAC
ACAAGCCTCGTCCAGCTCCACATCCTCCAAGCCCGTTGTTTATACAGATG
GTTGCTGCCGTGGTAACGGTAGAAGTGGAGCCATCGGTGGAATCGGTGTT
TATTGGGGACCAGATCATCCTAGgaatATAAGTGAACCGTTACTAGTAGA
CGAGCCAACTAACCAGAAAGCTGAACTGGAGGCCGCCATCAGAGCGATTG
ATTGTGCGATAGGAATGGGTCTGGATGATCTTGAATTACGAACAGATAGT
ACATACACCATCAAATCAATGACGGAATGGATTCCACGTTGGGAGCGGAA
CGGATGGAAAACTTCCAAAGGAACTGATGTTCTGAACAAAGAACAAATGA
TCCGGTTGAACGATTTATGTAAACGGATTGATATAAAATGGACGCACGTT
CGCGGACACAAAGGTATCCATGGCAACGAAGAAGCAGATCGATTGGCCAA
TGAAGGAGCAATGAAAACTTGAAAACGAAGCGTGGTTGTAAAACGGCGAC
TAACGAACGTGGGATTTTCCTTAGTGTCACTCATGGTGTAATGTTGGAAA
TTCTGTCaaattccaaataaataaatgaagaaGGACTCGCCTACTTTCAG
TTATGTTACCTGACAGCTTCAAATGACAATGTTAAAGacaatttaaacag
tattactTGTAAAAGGACATTACAGTGTGCCCGAAAGAAAATGGGACGGA
TTTTATAAATTTAGTatctttatttatttaaattttgttcGACTTACCTA
CCTAGAAACACTGTAGTTTTTGTTAATGTTTACCATTTGCAATACGGTGT
TTTGTCCTCGTTGTGGACAATTGTATATCATCCACAAATGCTCTGCtgag
aaagaaaaacttttaaataacaATAATATAGGAACTTTAGCATCATCG
Run BLAST on NCBI

transcript from alignment at sc0000007:1106757..1116755+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001056 ID=TCONS_00001056|Name=TCONS_00001056|organism=Clytia hemisphaerica|type=transcript|length=9999bp|location=Sequence derived from alignment at sc0000007:1106757..1116755+ (Clytia hemisphaerica)
CTCACGCGTGTCTATATcgtatcaaaaaaaattatttttcaattctcTTA
TGAATCGAACCTTCTTCAATAAGATTTTCGACCTTCTTTGTTCTTCCTTT
ATGGCTCGTAGTAAAGGAGGTGGATTTTATGCTGTTAAGCGTGGCAGGAA
TATTGGAATTTACATGACATGGTAAGGAATTTTCTATTGGTTATCCTACT
ACAGTCTTAGATTAAGAAGGAGGTAGGCTACGtccatatcttccttcgtt
ttttcaaaaactcctactctttgagagtaaggcctaaaagcctggagctg
tctattgtgtagaatAAGAAGGAGGGAGATCAGAGATAAATAAGTGTTTG
Gttaataccgtgagatcgggtaacttgcatcagtggaggaggctaacatg
catagggccattccagaatttgtctatAACAGAGGGCGGCgaacgacaca
ggatttccgagggcaaaagttttcaccaaaattcaaaatttctaaggcga
gagaagaaaatgtatgaatttcctaggcaattgaattagaaaaggcaaaa
aagagtggaatttccgatgcattttgcaaaagtatatggatttttatcgg
aatttctgaccaccactggaaaagaaaagttatttccaaggctagaaaaa
atttaaaaatgcacgtcgtccgacggggggtaacaaaaattttctggaat
ggcccataatagccctcaaatgaatgacctgtctgttcattaaaatacaa
aagttaacatcaaaacaaaaatattagaGCAGAGccgcgagcggagctgc
gtaccgtaagttggtctaatgtcgacatccgtcttctaataggatgatag
gaacaatagaaactgaggaaggtcggaatagctgattgacttttttgact
agcGAGCGCGATGAGAGGAAAAATCTTtagtctatcagtgatttcgacct
tcttattattcctatctataaagaaggatgtcgaaattagaagacggatg
tcgacattagaccaacttacggtagttcatttgttttaaaattttgctgc
tttgattggtcagtcatttgatccGGCTATGCATGTTTCTCTCCACTGAT
TCAAGTTACCTTACTTCACGGTAAGATTGTCTGATTTTGTATGTGAAGTT
TGGCtattcaatatatttttcaaccaTAACAGGtatataccgtaagttgg
tctaatatcgacatccctcgtctaatttcgacaccattctttagagacag
gaataatatgaaagcttgaatcactgattgaaaaaggattattcctcccT
GActactaagcaaagaaaaacagtttcaacctttctatcaatttcagctg
ataaaaagggtgtcagaattagaggaggggtgtcgacattagaccaagtt
acggtagccTATTGACCTTACTTTTTCTCATCAATAACCCTCTGGAGATT
AAGAACAGTCAGGGAactccctcaattgcggtatacttCAATTACAGTAT
ACTGCAATAATTGCAGTAGTTTTCATTTGTGgttagcctacaaaggctta
ggcagccatcgaaaaattgttctgctCCCGCGCGCGTCATCGTATTGGTT
GTAAAAAATACATGTGGGCGGGCAGGCGGTTGGTCAGAAAGATTTCAggg
tttttgaaaaacttcttcTGATCAGTCTTTTTTGTGTGATTTCTTCCTAC
TTCTCTGCATTGGAAAGTCAATGGAAAATATGATGCAGGTCGGTTGACAT
GAacactcgggtaacttaatgcatgtcccagaattgcattaatttttccg
ccccagttccagtccctaaaccataacaaactatacattttcgcaagcgt
atttggatgtagaataccgtattcggtgtaacttaaattccttctcagta
taattagagatatgttaaaaaaacctgattatgacgtcatgattaatgac
gtcataaatacaaaaagttgaatatctcgagaaatataaatcaaaacttt
atgaaatttggaccagtgataaagtacattgagatgtttcaaaaactTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTGaaagtatttcccaaaattaat
gacgtcagcaaaaattgcaagaattcgaatttttgcgataaaatgctgac
atcagcaaattttcaaattttttaaaaataattctcctcctcttgatgag
ttctatcattggtcaaaatttcataaagctttgagtattagttcttgaga
tattcaatttttaaaaattatgacgtcataaatagtgacgtcataatcat
gttttcttaaaaaaactcaaattctgttgagaaagaatttaagttacacc
aaatacggtattctacatccaaatacgcttccaaaaatgtatagtttgtt
atggtttagggactggaactggggcggaaaaattaatgcaattctgggac
atgcattaagttacccgagcagaaaaatattttaatggcCGCCTTATGAC
GGGTACATATAGTGCTGagtcgacaaagataaacaaagatcaACTGTAAA
AAAACTTATAAGAAGAAAGCTTgtctttttaaaaagaatctgATCTGAGT
ACTTGCTACAAAAAATAAGAGGGTGATGGAagcaataaaattataaaaaa
ataagaaatacagAGGCCCCATAGTGCCATTCAAATTCACATTCATTATT
CTAAAAATAGGAAACCAACAAATTGACTatgaaattaaaaaaggcaagCC
AGGTTTTCGGaggcaaaaatccaaaattttgtgGCTTGAACTTAGCTCGA
TCATCAATGTTGGGCTAAGATAATGTTTTGCTAtttccagacggtactaa
tcgataaattcgattatcgaagtaatcgaacgaccacttatcgattaaca
atcaaatgtcaagtaccaaaatttcaaaaaaattgtgagtattcgatcaa
tttcttaacaacccttcgaACACTCGATAACCGTTTGAAGACTTTAtatg
ttattgattactttcgataactttgacaactttgataaccaattactatg
atatatctttaagaaaaaccaaaaaaaatgacctaaattttcgccctggg
tttcctcaagtaactcatattgcgcgttctgattggtcggagaaaacgaa
agtggttttcgcGCATGAATCGAGTGTTTTAATTAGCCGAAATAaacttg
gtttcagattattATGACACGGTGCTactggaaacatatttgataaaatc
gaaggCTGGAAGGTACTCAATACaatcgaaggtattcaatatgattgaAG
GTTATCAAAAAGTAatcgaaatgattgaacaaatcgaaaaatggtcgaag
aaaatgccataacctggagtcgagtgagtattcgatcaccgataaaatcg
ataggtggtcactgactaccttcgattattatcgatcattattgattact
tcgatcacaatcgaacgttcgattagtaccgtctgttTATTTTGGCCCAA
ACATGACCCCGAAATGTTCAGGGTATGTTTGGGCAAAATTGTAGGTTGTG
AGTCAtcttatattattttttgaacttttgattatttttcctATTTCTAT
AAATTAATCCAAAGGCTACATATGTACATTTTCCTAGatactaaaaaata
aaataaaaaatagcacTAGCCGGTACCAGGCGttgcacgccggttaagct
gtagctgaacgcactaaaagtcctttgggtgttgaagctggcttaaaaaa
acgatcaaataaaaaatagaaatctctAGAACAtttaactctaaccttcc
ccgcgtgtcttatcttttaaccatatttggatcgtgtcccccgtgacata
attttttgtttaggtcaaaagttatcagaaagagcatcgtttactgtacc
agtgtcgtttgaaacgactcagcaggtagttatttttctcgcttcgctcg
cgttaaatatgccgtccagtttaaatgacaatttttcaggaaaaagtggg
aaggtcaGAAAGAATATTGCAACTCTTTGTTTTTATCAGATcgaaaaaaa
agaagacaattctaagttgcttttttaaacccttgtcataacttttcgaa
tttaaacataaaaaatgacgtacacactttttaacagtaacaacgacttg
aatatttttataagaagaaagaagttaactaattttttcttatgctttat
atcaccctttgaagttttgaatgctgttgttgtccacaaactttttgatt
tttggcccagctagctttagcgtactgggcctttcattagcattctgccc
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGATTG
tgaaggatttgattggctgttagaacatgattgacagaataaaaaacaat
tgaaatcgtctttattggttaaaaacataaaaggagaaaatttaattaac
tattaaaactataagaacataacagATGTAGtgtgttttaagaaaaacaa
tgtaacaaaccgtaacaaaccttcttctctttaggaagatgttcttttaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCAAgggacta
aaagtcataattttaaaacacaaacaaagcgaaaacgaaagtggtgacac
acagacacacaaagcaccgctattaatatatagaatcTAAAAACACTGAT
AAAAAACAACATAActaattatatatattttaagaTTATCCAGAGACATC
TTGGACAATCTTGCCTGAGGGTAACACCAATGATTCATGTTCACATACTT
GACTGACTTTAGGCTCAAAATATTTGTATATTGCTGTTTGGATGACATCA
GGTAGAATGGCTACCTGATGTCATCCAAACAGCAATatacaaatattttg
agattcgtTGTTGtagcatttttttttctttcactgtcaattttttgttt
tgccatTGAAATAAGGaggatttgaaaaattatcaaagatGCTTATGAAT
GCTGAGAAAGCACTTTATCGTTTATTTCACTCTCAGGCAAAAGAATGCGC
tccaaaacttctaaagggatttatgaaaaaatatgaaaaactggtgcttt
ttaatgaaatttaaacaTATATATTCGAAAACTATgaaaaattacctaaa
ttttgagccatagatgaaaaaatttgacctGACCCAACCTGaaccaacct
tgaaaactaatttgaagaacaGCTTCCAAAGAAAAAGATCAATGAGAGAA
CACCCATTTATATGTGtgggaattttttttactttacgtGTAATTAAAGC
CTAACAAATCAAAGCGCTATCTTGGGAatcaaaatgacaaattttggttg
gttgattttggctgctgcacaaatattttgtttcaagctttcaagtttta
attatatATAACTGTCTTTGGAACTTGATTGAGGTAACTCTCTTCTTTGA
TGCTGCAAATaaatcctgtagatgactgatgttgtttttattgatagctt
gatttcctagtttGACTAACTGACAAGTAGTCATTATCTTTTGTTGGCAA
AGGAAGGTCGACGTTTGAAAATACTTTATCATGCAGACTGAAGACACTTC
TCCTATGGACAAAAAACATGTTGTAAGAGACATTGTAAGGCTACATATCG
GTGTCAGACACAAAGAACTTACTTAAAAATAATAGAGATGCTCAAAATTG
AGACACAGGTAAATTCCAAAAGAAATAACCATCATTGCTCTGAAAATGAT
CATAAAATAAATTGGgggttgaaaaaaattaaaagatgtTAAATCTCTCT
AATGTAGCTAAACATAAATCTTGCAATCCAAGCCACAATAATCTTCCAAC
GTGAATATCACTGAGTCAATAAACACAACaatttatttagatattatatg
AACTTTTTAAAACACTTTAAACTTTAGAGTTAAGGAAAAATCACCTACAA
TTAAAATAATTCTTTCCTTTTTTAGGGCAGAATGTGAAAGTCAAGTAAAG
GGTTTTCATGGCGCAAGGTACAAAAAGTTTGGCTCAGAACAAGAAGCACA
AAGTTTCATAGATGAGGTGACGAATTAAACTAAAACCTCTTTTTATCAGG
GAGGCtcttgatattttttaaattataacTGACTACTTGATAATTGAGTT
GCTATTAGTGGGGTTACAGGTTTTGAACTTGTTTTGAAGGTTGTGGAGAG
GAACAAGGGGTTATTTAAAGCTCAAAGGAATTCTTTATTTTaaatagatt
taaaaagatatGTCATATTAAAATACTCCTTTTCAAAGGTTTCATCCAGC
AATTCTTCACTTGGTGTTAGAAGAACACAGACTTTTAAAGCAAAGTCACA
AAACACTGGTAAGAATTTTCTCCTCCATACATCTGTTGATAGTTCTGTTG
GTATGCTCAAGAGAAACATTGTAGCAAAGGTTTGGCATGctatcttctca
aaaatattagAAAGTTATAtcttgatgggttaaaatcaaccttcttccca
aatATAATTTTCGCTGTcgaagaattcttattcagttGCTCTTCATAACT
TTCTGTTTACGATAGCGGCTTCCtgtcactttcaaaacttttcaaagtct
tcCAAAGTCACACTCGAATGTCCAGCCACGATGGCCAGCCACGATGGCTA
AATAGATCTTATTTATAATTCTTCTAAGCCATTTacttaattgtggttaa
aaattgcaataCAATGTTATCTTCTTTCTCCTTTCTTTCATAGAATGAAA
ATCGTATCATTATTTCGGCAGCTATCTTTTTTCCTTTAGAGTTTTTTATA
TGTATAGTGATTCGCTGGATTGGGACATGCAGCGTGCAACACTGCGCATA
CGGCTATAGATAATGcttctttcaaattcaatttgtGTTCTACACCATTA
TATGTAATGTCTTTACAATAGTACATAATATTatgaattgaaagaaaaat
aatcacaatcaaattttattttttagcctTTCCAGGATCTGTTACAGCTC
TATCTAAAAGAACCAAATGTAGGTACTCAAAAAATTTGCATTCCCTATAA
GGATACCCTTATTAAGCTCGACcaatatatataaaaataaaaattagaaa
atatttaGATGTTGGAATATTTGAATATTTAGTTGGGATTTCTTCGTTCA
TGACTATACAATAAGTAGCtaattttaaagctattttctcCTTTCAGTGA
TAGAAGCTAGAAGTTTGTCAACACAAGCCTCGTCCAGCTCCACATCCTCC
AAGCCCGTTGTTTATACAGATGGTTGCTGCCGTGGTAACGGTAGAAGTGG
AGCCATCGGTGGAATCGGTGTTTATTGGGGACCAGATCATCCTAGGTACG
CAATAATGTGATAATATTTTGGTTGAATGTATCCAGGAGTTGATTCTTTG
CGTTTGTTTTGTTACCATATCGTGTTTTGTGTTGACATTTAAAAATAAAC
TATTTCCTTTTCTTAGGGGtttccttttttgatttttttcaggaatATAA
GTGAACCGTTACTAGTAGACGAGCCAACTAACCAGAAAGCTGAACTGGAG
GTTAGATGAGTACTGACATTATTTAATTCACGAATAGACCTTGTTCTCCA
CGTCAATGTGTAGAAATCATTATTTCAATGGATATGGCgatgtcaatatt
ttttataggggtcagtagcgtagacaggcgTGAAGGAACAATTgcttagg
agagcagatttttacgaCGAAGCACTTACCTACCActtacttgtggtata
aaaacaTAGTTACTGTGCTGTTTAAATCTCCTCTCCTAAACAAATATTCC
TTCatccctgtctacgctactagGGGTAATTAATTGTTTGATTGCATGAT
AAATTGCGTGGTGGATTTTAATCGTAGCTGTTTAGAACATGCGGATCTTC
ACACTCCCCTGTATGTATGAGAAAGGAGTTGTCAGCCCAAGTCCGCCATA
ACTTTTCAGGCTTTAAGCTTTTAGGGGGTTAACAAAGTTTAAGTTAAAAC
ATGTAGTATATCTGATATTGGTTACAGAATGTGGTATCTTCTAACATAAA
TGTCAATGCAATGAGTCGGGGGTTTTTATAGGGAGATTAGGGAGGCTTTT
CACACTATGGCTGTTATATAATATTCCATTACTTTGTATCCTTCTTTTGC
AATATCCAGGCCGCCATCAGAGCGATTGATTGTGCGATAGGAATGGGTCT
GGATGATCTTGAATTACGAACAGATAGTACATACACCATCAAATGTAAGA
AAATCTCATCATATTTATGACAGTGAAAGTCCTTATGAATTGCTTCAAAC
TCATCAAAACTCAATCTCAAATTGTTGCTGCTAAATTGTACCACGTTGAT
CTCGACATCATAAGGTAGTATGAAACACCTTAAGatattgataatttgat
aaGCTGTAGACCTTTGGTTTAACAAATGGTATAGACTTCTTCAAAAGTAC
AAAGGTTTTGTATCTCTTCTTTCCAGCAATGACGGAATGGATTCCACGTT
GGGAGCGGAACGGATGGAAAACTTCCAAAGGAACTGATGTTCTGAACAAA
GAACAAATGATCCGGTTGAACGATTTATGTAAACGGATTGATATAAAATG
GGTGAGGAGTTTTgcataaaaacaattattctacaaaaattcaaaattcc
aaAGGGGTTTAAACCTGCATTTCCAGCCACACAGGGATGGACCTcatcaa
cagggggtatacggtttttttctggNGGgtttacagcatttccagccaca
cagtgatggacctcctcaacaggggtatacgttttttttctgcaaaagcc
caagttgaaaaattgaaagaaccAGGACTCTTGGCATGATGCTTGGGTTC
AGTTGCACACCCTTtcgatttccttttttttaatcaaaaagcCCTGACCA
GGACTTATTAGGACCTCCTATTAGCTAACTTTGAAGCAGATTCACACTAT
TTTTATGGTTCGTTTGCTGACTTTAATACACCGTTCATTTAGACGCACGT
TCGCGGACACAAAGGTATCCATGGCAACGAAGAAGCAGATCGATTGGCCA
ATGAAGGAGCAATGAAAACTTGAAAACGAAGCGTGGTTGTAAAACGGCGA
CTAACGAACGTGGGATTTTCCTTAGTGTCACTCATGGTGTAATGTTGGAA
ATTCTGTCaaattccaaataaataaatgaagaaGGACTCGCCTACTTTCA
GTTATGTTACCTGACAGCTTCAAATGACAATGTTAAAGacaatttaaaca
gtattactTGTAAAAGGACATTACAGTGTGCCCGAAAGAAAATGGGACGG
ATTTTATAAATTTAGTatctttatttatttaaattttgttcGACTTACCT
ACCTAGAAACACTGTAGTTTTTGTTAATGTTTACCATTTGCAATACGGTG
TTTTGTCCTCGTTGTGGACAATTGTATATCATCCACAAATGCTCTGCtga
gaaagaaaaacttttaaataacaATAATATAGGAACTTTAGCATCATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000598XLOC_000598Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001056-exon-sc0000007-1491911889:1106757..1106927TCONS_00001056-exon-sc0000007-1491911889:1106757..1106927Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1106757..1106927TCONS_00001056-exon-sc0000007-1510915933:1106757..1106927Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1106757..1106927TCONS_00001056-exon-sc0000007-1575043694:1106757..1106927Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1113232..1113273TCONS_00001056-exon-sc0000007-1491911889:1113232..1113273Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1113232..1113273TCONS_00001056-exon-sc0000007-1510915933:1113232..1113273Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1113232..1113273TCONS_00001056-exon-sc0000007-1575043694:1113232..1113273Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1113545..1113614TCONS_00001056-exon-sc0000007-1491911889:1113545..1113614Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1113545..1113614TCONS_00001056-exon-sc0000007-1510915933:1113545..1113614Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1113545..1113614TCONS_00001056-exon-sc0000007-1575043694:1113545..1113614Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1114233..1114274TCONS_00001056-exon-sc0000007-1491911889:1114233..1114274Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1114233..1114274TCONS_00001056-exon-sc0000007-1510915933:1114233..1114274Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1114233..1114274TCONS_00001056-exon-sc0000007-1575043694:1114233..1114274Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1114454..1114601TCONS_00001056-exon-sc0000007-1491911889:1114454..1114601Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1114454..1114601TCONS_00001056-exon-sc0000007-1510915933:1114454..1114601Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1114454..1114601TCONS_00001056-exon-sc0000007-1575043694:1114454..1114601Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1114749..1114806TCONS_00001056-exon-sc0000007-1491911889:1114749..1114806Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1114749..1114806TCONS_00001056-exon-sc0000007-1510915933:1114749..1114806Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1114749..1114806TCONS_00001056-exon-sc0000007-1575043694:1114749..1114806Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1115416..1115500TCONS_00001056-exon-sc0000007-1491911889:1115416..1115500Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1115416..1115500TCONS_00001056-exon-sc0000007-1510915933:1115416..1115500Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1115416..1115500TCONS_00001056-exon-sc0000007-1575043694:1115416..1115500Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1115733..1115857TCONS_00001056-exon-sc0000007-1491911889:1115733..1115857Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1115733..1115857TCONS_00001056-exon-sc0000007-1510915933:1115733..1115857Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1115733..1115857TCONS_00001056-exon-sc0000007-1575043694:1115733..1115857Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1491911889:1116249..1116755TCONS_00001056-exon-sc0000007-1491911889:1116249..1116755Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1510915933:1116249..1116755TCONS_00001056-exon-sc0000007-1510915933:1116249..1116755Clytia hemisphaericaexon
TCONS_00001056-exon-sc0000007-1575043694:1116249..1116755TCONS_00001056-exon-sc0000007-1575043694:1116249..1116755Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1106757..1116755 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.83923	5.52339	16.0585	10.5026	0	2.3628e-06	2.39325e-08	0	0.441096	1.96976	0	0	0	0	0	0.737149	0	0	0	0.38803	3.77452e-08	0	6.94001	0	3.63914	1.54266	0	0.595	1.12447	2.50882
Blast
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BLAST of TCONS_00001056 vs. Swiss-Prot (Human)
Match: RNH1 (Ribonuclease H1 OS=Homo sapiens GN=RNASEH1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 9.382e-39
Identity = 76/142 (53.52%), Postives = 94/142 (66.20%), Query Frame = 1 
Query:  385 VVYTDGCCXXXXXXXXXXXXXVYWGPDHPRNISEPLLVDEPTNQKAELEAAIRAIDCAIGMGLDDLELRTDSTYTIKSMTEWIPRWERNGWKTSKGTDVLNKEQMIRLNDLCKRIDIKWTHVRGHKGIHGNEEADRLANEGA 810
            VVYTDGCC  NGR     GIGVYWGP HP N+    L    TNQ+AE+ AA +AI+ A    ++ L L TDS +TI  +T W+  W++NGWKTS G +V+NKE  + L  L + +DI+W HV GH G  GNEEADRLA EGA
Sbjct:  141 VVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVG-IRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWMHVPGHSGFIGNEEADRLAREGA 281
The following BLAST results are available for this feature:
BLAST of TCONS_00001056 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNH19.382e-3953.52Ribonuclease H1 OS=Homo sapiens GN=RNASEH1 PE=1 SV... [more]
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