TCONS_00001050 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001050
Unique NameTCONS_00001050
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001050 ID=TCONS_00001050|Name=TCONS_00001050|organism=Clytia hemisphaerica|type=transcript|length=100bp
CTTTTGTGTAGACAATGGACGGTTGAGGATAGATAAAGGGTGAGCACTAA
AAGGCTCTGTGGCGAGAAAAGATGCATTGCAAATTGTATTATAttcctga
Run BLAST on NCBI

transcript from alignment at sc0000007:1008321..1008478+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001050 ID=TCONS_00001050|Name=TCONS_00001050|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at sc0000007:1008321..1008478+ (Clytia hemisphaerica)
CTTTTGTGTAGACAATGGACGGTTGAGGATAGATAAAGGGTGAGCACTAA
AAGGCTCTGTGGCGAGAAAAGATGCATTGCAAATTGTNAGATAAAGGGTG
AGCACTAAAAGGCTCTGTGGCGAGAAAAGATGCATTGCAAATTGTATTAT
Attcctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000595XLOC_000595Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001050-exon-sc0000007-1491911889:1008321..1008373TCONS_00001050-exon-sc0000007-1491911889:1008321..1008373Clytia hemisphaericaexon
TCONS_00001050-exon-sc0000007-1510915933:1008321..1008373TCONS_00001050-exon-sc0000007-1510915933:1008321..1008373Clytia hemisphaericaexon
TCONS_00001050-exon-sc0000007-1575043694:1008321..1008373TCONS_00001050-exon-sc0000007-1575043694:1008321..1008373Clytia hemisphaericaexon
TCONS_00001050-exon-sc0000007-1491911889:1008432..1008478TCONS_00001050-exon-sc0000007-1491911889:1008432..1008478Clytia hemisphaericaexon
TCONS_00001050-exon-sc0000007-1510915933:1008432..1008478TCONS_00001050-exon-sc0000007-1510915933:1008432..1008478Clytia hemisphaericaexon
TCONS_00001050-exon-sc0000007-1575043694:1008432..1008478TCONS_00001050-exon-sc0000007-1575043694:1008432..1008478Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1008321..1008478 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001050 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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