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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001040 ID=TCONS_00001040|Name=TCONS_00001040|organism=Clytia hemisphaerica|type=transcript|length=270bp
GTTTGATTAAAAAACGGTTACTAATGCTTCCACTGATGTCAATGGCTCTG
GTAACTTGACGTGCAGCGTGAAATCAAACGAGTGTTGGTCGAAAGCGAAA
CATCTCCCAGACCGAGTCACGTGTCAAATCGGACATGCTACGTGTAGAGC
CAAGTGCAAATATGAGtGTGGTTTGGCTTATGATGCTTGCATCGAAGGAT
TTATACCCTGTTtctcaaaatattcaatttgtTCTAaacaatgtgaaaaa
taaatgatAATAAAGTTGAC Run BLAST on NCBI transcript from alignment at sc0000007:961159..963290+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001040 ID=TCONS_00001040|Name=TCONS_00001040|organism=Clytia hemisphaerica|type=transcript|length=2132bp|location=Sequence derived from alignment at sc0000007:961159..963290+ (Clytia hemisphaerica)
GTTTGATTAAAAAACGGTTACTAATGGTATAATTTACTTTTGTAGATATT
GATACCTCAATTTTCGTTTGGAGTTTAGATTAAAATCCATAAGATTTAAT
CAGTTTGCCAGCTGTATCTATgtttaaatttgatttgaaatgaatcattg
aaaataaacataaaacaGCAATAAATCGTCTTCATACACCGATTTTCTCT
CTGgttaaattctaaaaactttatcaCAGTTCAGCAACCATGTATTCGTT
GAAAGTCTGCATCTTTTTGGCTTTTGTTACCCTCGTCATTTCTCAAGGTT
AGGATGATATATGCTCGTTGTATGGTAGTGTTAGGGTATATCTGTTGTGT
GTTCCTTTTTGGTTGAAATGGTGGACTGTTGATGAAAATTTCGATGAGCA
TGTTTCATTTTCTCGTTTTAGCTTCCACTGATGTCAATGGCTCTGGTAAC
TTGACGGTGAGTTTTGAAGAGAAATTGTGCTTGCAAAGTGAAACTTCCGT
CGATTAATGTTGGAATGAGTAATAATCAAATCGTTGAAGTTTATGATGAT
TATTACGGATATGTAGAAGAGAGTTTTCAGTTTGCTGAGCCCCCTTGAGC
CGAACTCACACACTTAAACCCTTACTTTATATCATTCATTGCTATTTTTT
CTTGACACTTTAGTGCAGCGTGAAATCAAACGAGTGTTGGTCGAAAGCGA
AACATCTCCCAGACCGAGTCACGTGTCAAATCGGACATGCTACGTGTAGA
GCCAAGTGCAAATATGAGGTAAAAGTTAACACATCTCTAAATACAAGATT
TTTATGCGTCCATTTGACAGTCATAACTCAAAAAAATTCGGCTTTGGGCA
AATTTTCAATCGCAACCTCGCCTGGCCGGCAAATTTTTGACAAAGAACGC
AATCGATACTATCTCGCACATTTTTCCAAAGTTTCAAAACACGTATTTGT
TAAATTGGTACTCAAAATGAAAAGTGAAACATTTGTGTTATGGTGTGttg
tgcgcagatatgtaatttttgcgcagattatgtaatttctgcgcagatat
gtaatttctgcgcagatatgtaattattttgcgcagatatgtaatttctg
cgcaaatatgtaattattttgcgcaactatgtaatttcgaactgcgcaga
tatgtaattaaacttctgcgcagatatgtaaaacacgatctttaaaatca
atggtacCCCCTTGATAGCTTTTACCATTAAAACCAAACTCCGAAAGCTA
ATAATTATTGGTTtaggagttatgaattgtgttcttataaagttgatgtt
tgtgtttgtgtttatgtttgctttgaaagaaccgatcaccgaaagctaat
atctattggtttgagagttatgaattgtgttcttataaagttgatgtttg
tgtttgtgtttatgtttgctttgaaagaaccgatcaccgaaagctaatat
ctattggtttgagagttatgaattgtgttcttataaagttgatgcttata
agaaaaataaatatttccagCTTAAGCACCatcctatgtttgctttgaaa
gaaccgatcaccgaaagctaatatctattggtttgagagttatgaattgt
attcttataaagttaatgcttataagaaaaataaatttttccaagcacta
tcctatgtttgctttgatagaaccaaacgccgaaagccaatatcactttg
ataaaaagatattgacttgtttcttataaagatgatgcttataataaaaa
caacaatcgcCAAATGTTTGCCTTAGTCCAAGAACAATGTTCaagatatt
acttcttgtatgtgaaaaattaatgttaaAATTGAGTCAGTTTTtcaatc
tgcgcagaaatttaattacatatctgcgcagctcaaaattacatagttgc
gcaaaataattacatatttgcgcagaaattacatatcttcGCAAAATAAt
cacatatctgcgcagaaattacatatctgcgcataaTATTGTGTATTCTA
AAAGTacatttattttcttgtttttcagtGTGGTTTGGCTTATGATGCTT
GCATCGAAGGATTTATACCCTGTTtctcaaaatattcaatttgtTCTAaa
caatgtgaaaaataaatgatAATAAAGTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001040-exon-sc0000007-1491911889:961159..961184 | TCONS_00001040-exon-sc0000007-1491911889:961159..961184 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1510915933:961159..961184 | TCONS_00001040-exon-sc0000007-1510915933:961159..961184 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1575043694:961159..961184 | TCONS_00001040-exon-sc0000007-1575043694:961159..961184 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1491911889:961580..961614 | TCONS_00001040-exon-sc0000007-1491911889:961580..961614 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1510915933:961580..961614 | TCONS_00001040-exon-sc0000007-1510915933:961580..961614 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1575043694:961580..961614 | TCONS_00001040-exon-sc0000007-1575043694:961580..961614 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1491911889:961822..961926 | TCONS_00001040-exon-sc0000007-1491911889:961822..961926 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1510915933:961822..961926 | TCONS_00001040-exon-sc0000007-1510915933:961822..961926 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1575043694:961822..961926 | TCONS_00001040-exon-sc0000007-1575043694:961822..961926 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1491911889:963187..963290 | TCONS_00001040-exon-sc0000007-1491911889:963187..963290 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1510915933:963187..963290 | TCONS_00001040-exon-sc0000007-1510915933:963187..963290 | Clytia hemisphaerica | exon |
| TCONS_00001040-exon-sc0000007-1575043694:963187..963290 | TCONS_00001040-exon-sc0000007-1575043694:963187..963290 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:961159..963290 + |
Blast
The following BLAST results are available for this feature:
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