TCONS_00001002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001002
Unique NameTCONS_00001002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1466

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001002 ID=TCONS_00001002|Name=TCONS_00001002|organism=Clytia hemisphaerica|type=transcript|length=1466bp
CACACGGAGCCATAAGGAGTGATTTTCATACACAAATCACATTGCAAAAC
ATTTTATCATGAACTGAACTGACTGACTGATCATACATccacatacagac
atacatcaCTTTCCCCTAATCTTTTTTACACTTTACCTGATTGTGTACAC
ATACAAAGTAGCTAATATTACAAACGAATATGGTTCGATAAATTTTTAAA
TCAGACATGCAGTTGGCAGTAGAGCAAGAtcaaataaagagaaaaataaa
gacTTTAAACTGACAGACGGAAGAATAATAAAAATATAGAAGCATGTCTA
CGCCGTTAAAGAAAAGAGTGCGTCCCTCCACTGCCTCTGGTCTTATCCAA
AGCTCAAGAATTCCTCACATTTTGGATGATATACGACCTAACACGGCTAT
TGGAGCAAAAGAACCAGTCCTTGGGCTTGAACCTACCTATATTACAGCTG
ATTTACGTATTGGTCATAAACTTTTGAACAGTAAATACACAGGAAAGCAA
GTCCATGGTGGTGTTGATGATAGGAACCTGAAGAGTGAACATGGCAGAAG
AAATACTATTGGGCCTGTTGATTTTATTTCCAATGATAAAACACTACGAC
CCTTCACTGCTCCTATATCTGAAAACTCTGCCAAGATTGAAGAACGGATC
ACTTTGGATCATTTGAACAAAATCAAACAAGCTTTTGATGAAGCTGACGC
AGACAGCAGTGGAACTTTAGATTTGGAAgaattcaaaaatgttttcagaT
ATTTTCTTGGCTTGAAAGGAGCCCGATTGAATCTTTTAGAGTGAACACCA
GATGACAGCACTGTTCATGAAGATTGATTCTTCATCTGATGGTGAAATCA
ACTGGAATGAATTTTGCACCTATATGCAACTAGAGTATGCCGAAAAAGAA
GAATCTTATTTCAGATCTAAAGAAaCAGCATTTTACCTACCAGCAACGAT
CGTGGCATCACCACATAGAGATACCATTCTCTCTATAACGCACACAAGTG
ACAACAACTTCCTCTGTGTTAGTCAGGATGGGTACGTTTCATTTTGGTCA
TCCAGCATGCAGTTCAAGCGTAGTAAACAGATCGAAAGTGGTGGTCGTAA
AAGTAAATGGATCATTGATATGATTCTGATGCCACAGTACAACAAATTCA
TCACTGCTACTGGtgACCGAGAGATTCAGTTTCACGAGTTGTCGACCTTT
GAAGGATATTGTCAAATCAACAGTCTGGAAACCGTCCCTTTAAAACTCGC
TTATTGTTTAACAGGATCCGATGAATGTATATTGGTTTATGGCGATTCCG
AGGGATGTGTTAGTATTCTGATCATCAAGAACGTTGGTGAAACCTTAAGG
TTATGGAAGAAGATGCCCAAAGTGGAGGGGATAGCGAGTATTGGTATTGA
CAGCGTCATCaatgaagaaaatgtcaaatacATCAGATGGAAAGTTCATA
ACGACTGGGTACAAGA
Run BLAST on NCBI

transcript from alignment at sc0000007:566480..582402+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001002 ID=TCONS_00001002|Name=TCONS_00001002|organism=Clytia hemisphaerica|type=transcript|length=15923bp|location=Sequence derived from alignment at sc0000007:566480..582402+ (Clytia hemisphaerica)
CACACGGAGCCATAAGGAGTGATTTTCATACACAAATCACATTGCAAAAC
ATTTTATCATGAACTGAACTGACTGACTGATCATACATccacatacagac
atacatcaCTTTCCCCTAATCTTTTTTACACTTTACCTGATTGTGTACAC
ATACAAAGTAGCTAATATTACAAACGAATATGGTTCGATAAATTTTTAAA
TCAGACATGCAGTTGGCAGTAGAGCAAGAtcaaataaagagaaaaataaa
gacTTTAAACTGACAGACGGAAGAATAATAAAAATATGTAAGTATAGTCT
AAGTAGTGTCTCTATTTTTAGTGTTGATGGCTGCTAAATTTTGGTATGGA
TAAGCAGCTATTTTCTTTGAGCTAATTCTGAGAGAAGTAGAAGTagatct
tctatcctgatttttttactttctcaCAAGTCAAGTGTTTCTAAATGTTT
TCTAGTATATAAgtattatttttctgaaatttgcccgtaccaGTGGGTGA
AATAGGTCTCCGACCCcagctcgaaccaccaaatgcgcatgcaagcaacc
ttggttttcAAACCCAACGCCTAACCGCGTGCGCCAACAACAACAAGTCA
CGTTCTGAAGGTGCATCAGAAAGCTTTCATTCACACAAATACTTATACTA
GTCTCGCTGCTGAGGTCGATCaatgtttcatttcgtgacacacatcttag
aactaacttttttggtggaaactcgcgaattagtatacgtagattccaaa
atcaaaaagtttccactaTATTAttgtgcaagtaacgagtaattggcgat
tttttgcgtttccaggcaaaattgcaaggcctggaaattcatgatttttc
aggggtcttcaaattaaaaaaagacctatatcacatgataaagctcttca
aactgagcaaaaaagtgtattacaccaaagtcctgCAACTTCtctaaatc
aaaatttattggcctatttgtcataaaaaactgatggaacaggggggggg
ggcacgcagttactacaagacagtatgacacttactaccgtggtggtact
gtattcagaagttatgaaaacagttactacacagtgtagtaactgctgtt
tgggagtggtgccaaacactaaagctagcacttttggtgtagtaagtgct
taaattttaattctttttaaagaactttcaaaatttttcacaaaaaatga
atttttttgtgaaaaaattctttgctgaaaaaaatatttttgttataaat
ggacgaaaaaaaatttgaaatttttctcagacccaactttgaaattatcc
tttcccaaattatcattaaaatgttctcaacagctgttaaccaagtaaat
taaaagaaaatctagcacaaaaatggctttaggttgaaaaataattgcaa
tttagggtaatttcgaggatgtttttgatgatatcactcaaaaacagggg
tggtacctggaaatcttttctgaaaacagttactatcaaggtgtagtaac
tgcaaagggtggtggtcctgaaaaaaagtgttgaaaaagcacttactaNa
ctaccaaggtgtagtaactgcaaagggtggtggtcctgaaaaaaagtgtt
gaaaaagcacttactacacatcatgtcttgtagtaactgcgtgccccccc
ccctggatggaaaacagggaatttccccacaatctgcattaatttatgca
aaatctAACACCTTTTTGAGCACagataggcccataacttttgatctaga
gaagttgggactttggtgtaatacacttttttgctcagtttgaagagctc
taaaTACAATGCCCGTACCAGTGGGTGAAATAGGTCTCCGACCCcagctc
gaaccaccaaatgcgcatgcaagcaaccttggttttcgAACCCAACGCCT
AACCGCGTGCACCAACAACAACAAGGTACATCAGAAAGCTTTCATTCACA
CAAATACTTATACTAGTCTCGCTGCTGAGGTcgataaatgtttcatttcg
tgacacacatcttagaactaacttttttggtggaaactcgcgaattagta
tacGTAGATTCCAAAACCAAAAAGTTTCCACTATATTAttgtgcaagtaa
cgagtaattggcgattttttgcgtttccaggcaaaattgcaaggcctgga
aattcatgatttttcgggggtcttcaaattaaaaaaagacctatatcaca
tgatagagctcttcaaactgagcaaaaaagtgtattacaccaaagtcctg
CAACTTCTCTAAATCAAAATTCATTGGCCTATTTGtcgtaaaaaactgat
ggaaaacagggaatttccccacaatctgcattaatttatgcaaaatcaAA
CACCTTTTTGagcacaaataggcccataacttttgatctagagaagttgg
gactttggtgtaatacacttttttgctcagtagagctctatcatgtgatg
taggtctttttttaatttgaagaccccccaaaaatcatgaatttccaggc
cttgcaattttgactggaaacgcaaaaaatcgccaattacttgttacttg
cacgataatatcgtggaaactttttgattttagaatcTACATaatatact
aattcgcgagtttccaccaaaaaaagttagttctaagatgtgtgtcaaga
aaattgttttctagccactttttgttatctcagcagcgggactatacAGC
GTGTACAGCTATTGAAAGTACTTCGATTTGTGAAACGTCTTTTCGTcaca
tagaaaaaaagaaaatagcaaaagaacaaaaaggaattacccatagccac
CATTTTGCAACCATGCGGAATGGCGATtttacggaaatgggaatcctcat
atcAAATAAAGCATCTGGCATCTGCTGAAAATTTTGTTCTTCCCcataaa
tgcaaaaatgaaaaatgaagaagcttttgttttctgatcgtctttttaat
ctgccatgaagtgaTATAAAATTCCTTAAAGAAAGACACGTTCTCCTACG
AAGAGGCTTCAAATAGATAATGTTGTTAAAAAGTATGTCATTTTATCTTA
ACAATTTCGTAAACCATGGAGctctgacttttagttttatgacttgttct
cactcATTTGGTTTcctttataaaaagaaagtcgttattgtgaactttga
aaatgcttaaaatcaAGAACATCCCTGTTTAGAAAACCAACTTTTCTTTT
ATAGAATataccttacaatctagttttcatatttatagaaactagattgc
tgatgtgtggaaaggaatttcggcatgactgatccttttgttttgttaat
aacatgtcacaataactttcactaatagcgcgccctttttaaaatTAGCC
GCATGGAAATTGATAGTATTATCATATTAGGAACAGGTTTATTTTTGCCA
TTATACTATTATAAGTCAAAATGGTAATGTCATTAGCAAAATAAAGATCT
ATCAGAGAAAGGTCTATGCATTTTTTAAGCAAGAAGTTTTTTTACTCATT
GAATATGGCAGGCTGGCCATGCCAACAATTTTTCCTGCTCAACAAAATTT
CGACCACTCATTTCTCGTATACCCAGGACTCCTGAAGCGTTTTCAGAATT
ATAAAAAAGTCAATGTCACTGAACTTTACTAGCTAGCATCAATACCTATT
GGACATATCAAATACCTATTTCGTAGTTTACCTATTTCCATGTCTGTGAG
CTACTTTGGAAGGTATCTAAAAGTtgggttatttaaaaaaaaatggtaCT
CCAATTGGTGCACCAATTGGGGTACTTGTTGGGGTACCACTTTCTGTCCT
TAATTTTGTTAAATGACACTTAATTTCATTATAATATGGTGCTACAATCT
TTCATCGATTATTTAATAAAGTTACAAAACTTTTGTCACAATTGCCGTTT
ACCGACACAAAGTGAAAATATACTGCTTTTTAATTAAATCAGCCGCTACC
TTGCTTTTCTCCTTTCCTACTtcaaaaatttacagaccagaataagtAAG
ACCAGAATAAATTCAGTAACCAAACCAAACAGTATTCCAATCCAGTAACC
AACATCATAATATAGCTTAAAATCAGCAGAATTATAAGGTACTGGCTAGT
AACATCTTGTtaatatcttttctttttacatgTCAGAATGCTGACAAAAA
ATGACACTTTcttgcaaaaatatttaaaaaatattgaaatatgatAATCG
TAAGTCCTccaaaaagatttattatactgAAAGTGATGCTCATAGTACAA
AAGGATACAAATTGACAGTCATTTTAGCCTTGGAAAATCTGTAGAAATGC
TTTTAGAGCAAGAAAAGCagtgacattttcttttgtcatttttatcacTA
AATTGACACTTTCTACCagaaattttgatgacatcataaaATACAATAGT
TTAAGGTTGCCTTGATTAAGAATTACATATATACTCAATATGATGCAGGA
AATACAAttggatatgaattgacagtagGAAGTAGTCTTTGATTCTCTCA
AACACTTGTTTTAAAGCAAACGAGCATAAACACATATTATATTATTTGTA
TTACATGTTAATAATTATATCACTctacatttatttttaaaagcgtATTT
TACTCTTTTTCACACGATTTAATTCTGTTCAGTAAATTAAACGGGTACCC
CAATGAGTACCCCAATCGGTGCACAAATTGGTGCACCAATTGGGGTACca
tgctttttaaaataaccCCTAAAAGTTACTTAGAAAAGATGAATTGGCTT
TAAGCCAATATAAGTATAACCTGGTATAACAGAAGTTATGTTATCTAGAT
TGTGTTAAAAATTTATGCCTAATGGACAAAATGCACTGTATTTTGTAAAA
GAGGCTGCACTCAAGGGGCACTTTTGTCCCTGTTTGTTCTTCAATATATT
GAGAAAAATATCTTACCCAATATAGTACATCAAATACCTTTTtttaaagg
gaagaaattttgatggGAACTTTATTTGCTTGGcagatttggtcaaaatt
cgccaaattaagttcccgccaaattaaattcccgccaaatttaaattgct
ctatttattccccaaacgtgtgctatttcaggcttttaacaggtttttct
ttttttaatggcgttttttggaaaaaaatatttttcatccgccaaattaa
attctcaccaaatttaatttttcaagttaactgCCAATGAAATTAagttc
cctctgaaaaaacttcttcggccatccgccaaattaaattccagccaaaa
tttcttcctttaaggtttATAGCGTCACCTGTGCAGAGTGTCTTAGCTGG
AACCAGCATTCCTAGCGCCATTCTGCTTTAAAGGCGGGGGTACGGAATCA
GATATACACTTTCAAACTTCTTGTTTAACGATTTAGTTTCAATAAATTTG
GGGTAGTTAATGTTTGTCTTCCCAGCTGCATCAATGAACTTTTAGATAGA
TTgagttaaatttttcaaaagcctttaaacacCTGGCAAAAGTAATCATA
ATTGAGATCTTAATTCCTAAACTCaaatctttaaagattttttctttgcc
CAGCTGAGGTTAGTTGAGGGGTATATTAACACATATGGTATAACCCTCTC
CTATTGAGAAACTTTAAAAGCTTTTCAGTTATATTATTATGGTATTATTC
ATGAAACTTAAATTTTATTGCTATCTTTGCATACTTTGGCAATTGAAGAA
CAAATACTTTCACATctatactgaagttgagcccagtgctttaGCATGTT
ACAGTATACTATCtgaatttcatattttatgTCTGTCACGCTAAAATGGT
AGGCCAGCTACGATTTTGAATGGTTTGTCAGGGGGTTGATTTGAGTATGA
AAGGGAATTTGTTCTGTCTTCCTACAAAAATCTTGTTATCTTTCGAGAAA
GCAGAGCATAATACGTCaacatttttattatttgtttaaattttcaCTAC
CTTCCGATAAAACTCCGTCCAAAATGAGGTTTGACGTTCAAATCAAAGAA
GCCTCTACAGTGACTTTCTAATGAAAATACTTTAAATCgttgcaaatttt
caaatttgaaaaaggcgtGACACTTTCTAGATTCTACAAAATAGCcacca
aaacatatttttttagatTCAATACACATGTAAAAAACAGAGGTCTTCTG
CGCGAGAAGTTGATATAAACAGTTGTTTTGTAAGTTGTGAGATGTCTAtg
attcttttgaaatttaaatatttattatttgtttttctgGCATCCTCAAA
ATCTACGCATGTGCTTTTTAAATAAAGTAATAGATGCAAAAATGGTCTTT
TGTAAAGGGATTTGGGTGCACAAGCTAAACCAGCGTTTGCAAAGACATGA
ACCTTTTAGTTTTCACTATATAAAGATATGTTTTTACTTTACTGTGTTTT
AACACAAACACAATCTTCAGCTAATTCAGTGTACAGTAGATATTTCAATA
TTCACTTTACAGNTTTTGAATGGTTTGTCAGGGGGTTGATTTGAGTATGA
AAGGGAATTTGTTCTGTCTTCCTACAAAAATCTTGTTATCTTTCGAGAAA
GCAGAGCATAATACGTCaacatttttattatttgtttaaattttcaCTAC
CTTCCGATAAAACTCCGTCCAAAATGAGGTTTGACGTTCAAATCAAAGAA
GCCTCTACAGTGACTTTCTAATGAAAATACTTTAAATCgttgcaaatttt
caaatttaaaaaggcgTGACACTTTCTACAAAATAGCcaccaaaacatat
ttttttagatTCAATACACAGGTAAAAAACAGAGGTCTTCTGCGTGAGAA
GTTGATATAAACAGTTGTTCCGTAAGTTGTGATATGTCTAtgattctttt
gaaatttaaatatttattatttgtttttctgTCAAACCTCAAAATCTACG
CATGTGCTTTTTAAATAAAGTAATAGATGCAAAAATGGTCTTTTGTAAAG
GGATTTGGGTGCGCAAGCTAAACCAGCGTTTGCAAAGACATGAACCTTTT
AGTTTTAACAATATAAAGATATGTTTTTACTTTACTGTGTTTTCACACAA
ACACAATCTTCAGCTAATTCAGTGTACAGTAGATATTTCAATATTCACTT
TACATTGACTGAAGATTGTAAAAGCTTGACACATTGTAATAATTGAtgga
attttcaataaatactGTTTTTAAACTGTTTAGTCCCTTCAATATACTGT
TCAACCTTTTCTTTAAATGTCCAGCTTTCCAAATTTTAGATGAGGTGCGA
AAAACTGATGTAATTTAATTGTTAATTATGatttaatattttacttttcT
AGAGAAGCATGTCTACGCCGTTAAAGAAAAGAGTGCGTCCCTCCACTGCC
TCTGGTCTTATCCAAAGCTCAAGAATTCCTCACATTTTGGATGATATACG
ACCTAACACGGCTATTGGAGCAAAAGAACCAGTCCTTGGGCTTGAACCTA
CCTATATTACAGCTGATTTACGTATTGGTCATAAACTTTTGAACAGTAAA
TACACAGGAAAGCAAGTCCATGGTGGTGTTGATGATAGGAACCTGAAGAG
TGAACATGGCAGAAGAAATACTATTGGGCCTGTTGATTTTATTTCCAATG
ATAAAACACTACGACCCTTCACTGCTCCTATATCTGAAAACTCTGCCAAG
GTTTGTTAATTAGATTTATAGTGTATAAATCTTTCTCCTAGAGAAGATTA
ATAAGGCTTCACAGAACTGTTATTCAAAAAGTTCATATCTAAAGATACAT
CACAGTCGTACTCTGTGAGCACTGTACACAGTTGATCATTGAAAGTATTT
ACTATCACTCTTTAGTTGACAACTCCAAAGCAATAAAACCATTTTACTTT
CATGCAAAGCCATGGCTTTTTTCCCTTCAAGATTGAAATATAAACTCACT
CAAATTAATATTATTAATCACATTCAGTGTAGcttcattttcaagaaaaa
ctacACTAAAAAGATCTTTCTGAAGAGAAGTTTCTTTAAAATTCTTCCGA
ATTATGTTTGGCATAAGGGTTAGTTAGAAAATACAGATTTATACGATCTC
TATTTTAAGCATTTTGTTAATATATTCCTCATCAATCTTTAATACAAATC
TTCCAATGGAGTGGCTACTGATTCCACCACAAAGTAGAAGATAATTTCGT
CCAAAATTGTTATTTTATTGTCAAAGAGAGATTTATATAAAGATTATGAA
AATCTAGATTATGAAAATCttggaaatgtttttttctcattcCAAGTGAG
GTGTTCGAAGAGGGAACATGGCTTCCTCGCGTTCAAGGCTAGATCTTGAT
AAACCCTGGCAGTTAAACTACTACGAGTTTTTCTACAGAGTGGCCAAGAA
TGTAATCTATTTGTTTTTTCATATCCTAACAAATTCTCACTCTCTAACTT
AGGTGTTATTTCTCACATTGTTTTCGTTTCTAATTAATATCTTTTCCCGA
AAACaaatttaacctttttcatcattttcttccTTCTAGATTGAAGAACG
GATCACTTTGGATCATTTGAACAAAATCAAACAAGCTTTTGATGTATGGA
TACAGATggataatttattttttgaatcatTATGAGCCTTTCATAATCTC
gctttttttaaacgactttgCTGTGGCGCTAGCCAAAAATTTAACAAGCT
TTTATATTTTAGCTGCCAGTTATAGTTCTTGAagtccaataatttttttc
ttctttatttcagGAAGCTGACGCAGACAGCAGTGGAACTTTAGATTTGG
AAgaattcaaaaatgttttcagaTATTTTCTTGGCTTGAAAGGAGCCGTA
AGTTTGAGATTACTGAAGTACaaatttttataacttttaGATATCTTATT
AAATAGTTAACCTATCCTGTAAATTTACATTATTTCTTACTTTTTCACCT
CAAGTATGATTTCCGTTCCTTGTGCTACGTTATAAGGAATAGCTTCCAGC
GATTGAATCTTTTAGAGTGAACACCAGATGACAGCACTGTTCATGAAGAT
TGATTCTTCATCTGATGGTGAAATCAACTGGAATGAATTTTGCACCTATA
TGCAACTAGAGTATGCCGAAAAAGAAGAATCTTATTTCAGATCTAAAGAA
GTAAGAAATTCTTATCACATCATTGTCTACATACCCTATTCTTAACGACT
ATCTGAAGGCTTGTTTGAACACCTTTTACTTACTTATGATTCTGCCATTT
GCAACTTGTTTCAGAAGTTCTTTGTTTCTCTTCACAAATGCGAAGAGGGA
GCTATATTTGTTTCTTCTTTACAACATTTTCTCTCATTCCTTTGTATTCA
CAgaaatttttaatcatttttttttctttcaacagaCAGCATTTTACCTA
CCAGCAACGATCGTGGCATCACCACATAGAGATACCATTCTCTCTATAAC
GCACACAAGTGACAACAACTTCCTCTGTGTTAGTCAGGTGAGTGCTGTAC
TAGTAAAACCAATCAGATGTCCTATATTGAGTAGTGTATGAATGAActta
ttaaaaaattaaagattaACTTAAAATGAACCTTCTTTACCTCTTCTAGG
ATGGGTACGTTTCATTTTGGTCATCCAGCATGCAGTTCAAGCGTAGTAAA
CAGGTCTATACTATAATTGAATTGTTTTCATTCAACTATTGTCATcgaaa
ttttgagtaaaatcaTAATTGTTTATGTGTAGATAGAACTACTAAGATGC
ATAGTTCAGACACCTTCCGAAAAATGAAGGAGGGGGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACA
CCtttagaaaaaatgaagaagggggaatcagaaaattttcctggaaaagg
aggggggatagcaaggaaggGGGAATAGTTTAGGAAGGGGGTTACATATA
TATTGTTTCATATTATTTTCAAggactgttatgaaatttggtcttcatga
aaAGAAGTTTTCTGTTAGGGTAGTctaagtcaaaaagaagaaagaagttt
attatttcgctttctctatCTAAAGATATATTTACATATATTTattagct
atttttgtccaaaatccttggggataggcatttttaaagtttgggggatg
ccaagaaggggggataCCAAGAATGGGGgaatcatttaagaaggggggtc
agacccctttccgcactatgagaTGCAAAAAGAATTGCGCTATTTTTTGA
CCTAATAGTAATACTGTTGTTTAGCGACTGTAGTGCAGGTAGAGCGTTTG
GTtatggtgcgcaaggttgtggttTCAAATCCCGGCCAGTCATACCAAAA
ACTTCGTACTTAGTAAAAAAAATGGTAGTTGATGCCTCTCTACTTGACGC
TAAGCAATTAAAGAGAAGGATTGAGgataagtggagcaatccagggagaa
agagtggagcaatccagggagaaagagtggagCAATCTCCTACCTTAGGG
AAGATAGTTATTAAGAAAGGAGCCTTCAGTTCGCCTCTGACTGTGGTCGC
ACATtatttctcatattgtttttctccttcttCGGTTCAGATCGAAAGTG
GTGGTCGTAAAAGTAAATGGATCATTGATATGATTCTGATGCCACAGTAC
AACAAATTCATCACTGCTACTGGGTAAGCCTTCCCAAGACCTTTGAAGTA
TTCTTCTGCTATATGGTGCCTATTAAACTGGGGGAGGTATAGTATAAATC
AAGCGGttttgagcaaaataagggaattttattttgacaGTTAAAAGTAT
TAGCAAAGATTAGGGGTTATTTCAAGGGgttaaaaaatcaacaaactaTG
GGCTtttttataaagtgtattcgGGATTGTTTACATACATTTCTGTAatc
atattttttctttctttagtgACCGAGAGATTCAGTTTCACGAGTTGTCG
ACCTTTGAAGGATATTGTCAAATCAACAGTCTGGAAACCGTCCCTTTAAA
ACTCGCTTATTGGTAAGAAGAATATGAAAATacctttgatttgttttttt
ccaTCATTTGATTTTCTGTTATTCTTAGTCGTACAGTTGTCGCTCCAAGA
AATTTGAACCAAATTCATTCAAATACTTCGAGTGATTGACGGGTCTTTCT
GGCTTTTGAGTGGTCTATTTCTATAAACAGCCGAATTGAAAACTCATTTT
TACCACGCTACTTTTTCACGTGGTCGTCATCTcatcaaataatattttct
caTTTCATTTAGTTTAACAGGATCCGATGAATGTATATTGGTTTATGGCG
ATTCCGAGGTATAAAGTCATCGCTTGCTGTTTTTCTCTTAGAAATTTTCC
CCTATTTTTGTCATGATTATTATGAAATTTCTTCAATACCTTTATTCCGC
TTCAAAATGCCTGATAATGTGACTgattaaaattgaatatctgtTCTTTC
TTCAGGGATGTGTTAGTATTCTGATCATCAAGAACGTTGGTGAAACCTTA
AGgtaattctttttttctcttgaaaacttTGCTCTCGCCAGCCTGTATGA
GAGAAATATAAAAAGGTTGAAGAAATTTATCATCCGAGTGAGGCCAATAT
TTAGAAgttctgcgaccgcagtcggaggtgaCCCGAAGCCTCCTCTtaca
tcaaattttcaaaagatttataGTAAATCATATCACATTTGAAGCACTTG
CGTCTTACCCGTCTACTTTTTTTGAGTAAATAGGACGATTGTAAAACTTC
GACTAAGAGCCTTAAAAGCTAATTTTCTTACCGAAAATTTGTATTGAATT
CGGGCTAATCTAATGAGACTTTTTtacagtttttaaaaatttattcttaa
cCGTTTGTTCATCTTCCTACTTTTGTATATATATCTTGAAGAAATTATTG
GTTGTTGCTATAAATTGTTGACTAGTGATATATTAGGCTTAAAAGTTAGG
CCAAAAGGACAAACTTAGGCTAGTCTGTAAAATGCACATACCTTACAAAA
GCCTCTTGTTTACATGTCAAGTGGTGCGATacaaaatttaaacaaaaaag
atCTACAAGTAGCAAAAGATAGAGGAGGTTCTTAGTTTTTGAGGCGTCAA
TATTCGATTACTTAATCAGATATGGTCCAAATTTTATCTACAGAAAGTAT
CAAAAATCATTGATGAAGGGGGTGATGAGAAAATGGTTAAGATTATAGAT
TTAAAAGATCTTTGTAAAAACCTTATTGGTCTAGATTCTTGTGTCTGATG
GTCTAATCTTGGAAGGAGAGTCAAAgtcgaataaaaaatatacaaaagca
TGATAGATAAAAAAATGATTATGCTAAATATGTTTCTCTCTAAAATAATT
ATGAAGGTTGACGTAatacattttacattttttgttttaaccTTGTAGGT
TATGGAAGAAGATGCCCAAAGTGGAGGGGATAGCGAGTATTGGTATTGAC
AGGTATTTTCAACCCTAATTCTCACATTTTGAGTattgataaaaattgaa
gaagcttTCGGTAAAAATACCATACTATACTATTAAAATCGCTTACCTTG
TCTGAGGGAAAACTAACGTGTCAAAAATATGTAGCTGTAGGTATTAATCT
GTTTCTTTAAGCGATTTACAAGCCTAATTCCTCCCCGTAATTTGTTCACA
TTCAAGACAAAGAAATCCATCTTCACCGAACTTGCAATTCAAACATGTCT
TTCCGCATTTTTGAAGCCACCAGTCTGATTTGTAGGGGCTTCTTGAGCAG
GAGctgtattttcttcaaaaatctttcgaaaGATCACCGAAACCCGATTT
GTAACTTCTCCACTTTCGACGAAAGTTAATGGCCCCATCAACACATCTTT
GAACAACTGACCATCCACCACAGAGAAGGGACATTCTGCAATGAATTGGT
TGTTACTTTGATGGTTCTTCAGGCTCTTCAATCCCATAGATTCCATCCGT
TTTCCAACCTTTCTTGTCGATGTCTTTGCAATCTGTTGCATTCTTCATCA
AGGAGATAAATTTGACTTTCGTTTCGAAATTAATTTCACATTCTCTTTTC
TCGAAGTAACGAGCTTCCGTTGATAGTTTGATTCTATGTTCAATCGACTG
ATGCTTTTTAAATGGCATGTGTTTGTCTGCTCAAGAAAACTGCTGATTTG
CACTCACAAAGTTCTTTTGACATTTTGTGAAACATTTTGAAGGTGATGGA
ACATTGATCGAACGaaataataagcagatattcaataggtaaaagttggt
tattgagatttattaacccgaggtgatgtaatattcaacgaggcgaagcc
gagttgaatatacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcaccgagggtta
ataaatccaataaccaacgaaaacctattgaatatatgttttattatata
cctaaggcaaaaacaaaacattaattatGTTAATAGTCGAACGTTTCact
taaaacactcccataatcgaacgttcgaatgttttccttttttaatgatt
ttctcaATTACTTTgaatcataaaatttgttcatgaaattgacaatagat
ttattttaatgaatttctttgatacaacaagagcaacaaaaaaaataaaa
ctttgaaagcaaaatttgaaaaaaaaattctaccgtggtataatagccat
ggtatatcaagaattattcaatggctgtttttgcctacaggtatataata
atcaAAGTTAACGAAAGTTTTGTTAGCAGAAGAAAGATTAGCTGAAACTT
TTGAATAaacacaattaaaaaaattaggttGTCATGTCGTTATATTTGCC
TCATATTTGCCCTTTAGAGTAGAGCGTGATATGCGCAatatggatgatct
gttatgagatagCCAAATCCGTGacttgatgtttttattttccacGTTTA
TTTTATAGCGTCATCaatgaagaaaatgtcaaatacATCAGGTACATACA
ATTTATCTCAACGAtaagtaaatgttttttttttattagaacatcttGAT
TTGAGCCGAGCCTGCATTTACGAAAGCTCCTTATAAATTCAGATAGTTTC
AAGCAAATTAGGGAAATCTCTCTAATCATCAAAGCCTTGggacgttctta
actttttgagttttaaacctaaaaattttcttataatatgttcttatttt
cgccattttttgagcatttttgtccatttttctaagaaatcgggtgctTT
AGAGCAAAGCGCATTTAAATGTTATTAACGTTATACATCTGATTTATATT
GCGTCTACCATGAAACTTTCAAAGTGACGCGTATTTGAAACATATGTTTT
TTACATGAAATGgtgtaatctttttttttttctacagatGGAAAGTTCAT
AACGACTGGGTACAAGAGGTATGTATTTTATAGTCTTGCTCTCAATTTCA
TAACATTACTTTATTTGTTGACTTTTACTGACGGCttcgtcaaaatttca
aaaagtttccaaacAAATCGCAAAAATTGCAATTTAATGGGCGGGGAGGA
AATATTCGATCAAGCAACATAGCGTATAGCTGTTAGAGAGTGTCAGAGCA
GAccaaaaataagcaaaaatggcTAATTTTTCTCGTAAGCAAGAGCTTGT
TCCTaattctgtttttatttttattttagatccGTTATTATCATTCCATA
CGAAGTGTGATATCATGCTCCACTGATGGCAACCACTCCCTTGTTATCGG
TATGTTCTCCATATTTCACTTTCAACTTCAAGGGAAGAATAATTGCAAAC
CAAACTCTTGGTCCCTTGAGCATTCGCGTGCTGAAAATACTTTTCTATTT
CGAATTTCTCTAAACTGAATCGTTCTCTATTTCTCAGTAAAGGAATTAAG
TGGCATATCCTTGGGTCTGTAATAAAATCAAACCTTTTTTATCTTCAACA
TTCTCCATCTAGAACAAATTTTTCGGTACGTTGCAATAGAGAGATTTGAG
ATAGAGAGATTCTAGCTGGTGGTATTTCTAGTATAGAAACTCCACACTGT
TCTATCTTAAGCTTTGGTCTTCCATCTTATCATTTCAGGACAAACGCTTG
GTAGCACTCATGTATCTAACCagaaagaaatgaagaaagNCAGATGGAAA
GTTCATAACGACTGGGTACAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000581XLOC_000581Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001002-exon-sc0000007-1491911889:566480..566766TCONS_00001002-exon-sc0000007-1491911889:566480..566766Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:566480..566766TCONS_00001002-exon-sc0000007-1510915933:566480..566766Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:566480..566766TCONS_00001002-exon-sc0000007-1575043694:566480..566766Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:573782..574129TCONS_00001002-exon-sc0000007-1491911889:573782..574129Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:573782..574129TCONS_00001002-exon-sc0000007-1510915933:573782..574129Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:573782..574129TCONS_00001002-exon-sc0000007-1575043694:573782..574129Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:574969..575022TCONS_00001002-exon-sc0000007-1491911889:574969..575022Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:574969..575022TCONS_00001002-exon-sc0000007-1510915933:574969..575022Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:574969..575022TCONS_00001002-exon-sc0000007-1575043694:574969..575022Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:575193..575276TCONS_00001002-exon-sc0000007-1491911889:575193..575276Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:575193..575276TCONS_00001002-exon-sc0000007-1510915933:575193..575276Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:575193..575276TCONS_00001002-exon-sc0000007-1575043694:575193..575276Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:575429..575579TCONS_00001002-exon-sc0000007-1491911889:575429..575579Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:575429..575579TCONS_00001002-exon-sc0000007-1510915933:575429..575579Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:575429..575579TCONS_00001002-exon-sc0000007-1575043694:575429..575579Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:575815..575916TCONS_00001002-exon-sc0000007-1491911889:575815..575916Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:575815..575916TCONS_00001002-exon-sc0000007-1510915933:575815..575916Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:575815..575916TCONS_00001002-exon-sc0000007-1575043694:575815..575916Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:576029..576082TCONS_00001002-exon-sc0000007-1491911889:576029..576082Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:576029..576082TCONS_00001002-exon-sc0000007-1510915933:576029..576082Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:576029..576082TCONS_00001002-exon-sc0000007-1575043694:576029..576082Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:577420..577502TCONS_00001002-exon-sc0000007-1491911889:577420..577502Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:577420..577502TCONS_00001002-exon-sc0000007-1510915933:577420..577502Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:577420..577502TCONS_00001002-exon-sc0000007-1575043694:577420..577502Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:577749..577841TCONS_00001002-exon-sc0000007-1491911889:577749..577841Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:577749..577841TCONS_00001002-exon-sc0000007-1510915933:577749..577841Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:577749..577841TCONS_00001002-exon-sc0000007-1575043694:577749..577841Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:578092..578137TCONS_00001002-exon-sc0000007-1491911889:578092..578137Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:578092..578137TCONS_00001002-exon-sc0000007-1510915933:578092..578137Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:578092..578137TCONS_00001002-exon-sc0000007-1575043694:578092..578137Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:578285..578331TCONS_00001002-exon-sc0000007-1491911889:578285..578331Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:578285..578331TCONS_00001002-exon-sc0000007-1510915933:578285..578331Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:578285..578331TCONS_00001002-exon-sc0000007-1575043694:578285..578331Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:579228..579281TCONS_00001002-exon-sc0000007-1491911889:579228..579281Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:579228..579281TCONS_00001002-exon-sc0000007-1510915933:579228..579281Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:579228..579281TCONS_00001002-exon-sc0000007-1575043694:579228..579281Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:581188..581220TCONS_00001002-exon-sc0000007-1491911889:581188..581220Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:581188..581220TCONS_00001002-exon-sc0000007-1510915933:581188..581220Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:581188..581220TCONS_00001002-exon-sc0000007-1575043694:581188..581220Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1491911889:582373..582402TCONS_00001002-exon-sc0000007-1491911889:582373..582402Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1510915933:582373..582402TCONS_00001002-exon-sc0000007-1510915933:582373..582402Clytia hemisphaericaexon
TCONS_00001002-exon-sc0000007-1575043694:582373..582402TCONS_00001002-exon-sc0000007-1575043694:582373..582402Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:566480..582402 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0342417	0	0	0	0.955812	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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