|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000956 ID=TCONS_00000956|Name=TCONS_00000956|organism=Clytia hemisphaerica|type=transcript|length=6868bpRun BLAST on NCBI transcript from alignment at sc0000007:208516..234810+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00000956 ID=TCONS_00000956|Name=TCONS_00000956|organism=Clytia hemisphaerica|type=transcript|length=26295bp|location=Sequence derived from alignment at sc0000007:208516..234810+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00000956 vs. Swiss-Prot (Human)
Match: ANKH1 (Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 396/533 (74.30%), Postives = 458/533 (85.93%), Query Frame = 3
Query: 189 DGKAFTDPEVLRRLTSSVSSALDEAAAALTRMRSQTGKPNATTSQSEQGTRSLVEACIEGDIAAVRKLLDEGRSVHEPTDEGESLLSLACSAGYYELVQVLLAMNANVEDRGSKGDCTPLIEAASNGFVDIVKLLLQHGANVNAQSSAGNTSLHKACGSGYDDVVELLIQHNADLEHQNENGHTPLMDAASNGHVKVAKLLLDAGAGINTHSSEFKESALTLACYKGHVDMVFFLLERGADQEHKTDEMHTALMEASMDGHVEVARLLLDHGAQVNMPADSFESPLTLAACGSHVELAELLIEHGANLEEVNDEGFTPLMEAAREGYLPMVALLLAHGANLYXXXXXXXXXXXXXXCCGGFLEVVAYLLDCGADIELGASTPLMEAATEGHVELVKFLIEKGANVNAITATGDAALTYAAENGHTDVVEVLIEQGANIEHESEGGRTPLMKAARAGHLCTVEYLLSQGADVNRKTSGGEHSVLSLACAGGHTAVVELLLGRGGNPTMKLKDNSSMLIEAAKGGHANVAHLLMN 1787
DGKAF DPEVLRRLTSSVS ALDEAAAALTRM+++ + + + TRSL EAC +GD+ AVRKLLDEGRSV+E T+EGESLL LACSAGYYEL QVLLAM+ANVEDRG+KGD TPL+ A+S G++DIVKLLL H A+VN+QS+ GNT+L AC G+ D+V++L+ A++E NENGHTPLM+AAS GHV+VA++LLD GAGINTHS+EFKESALTLACYKGH+DMV FLLE GADQEHKTDEMHTALMEA MDGHVEVARLLLD GAQVNMPADSFESPLTLAACG HVELA LLIE GANLEEVNDEG+TPLMEAAREG+ MVALLLA GAN+ AQTEETQETALTLACCGGF EV +L+ GADIELG STPLMEA+ EGH+ELVK+L+ GANV+A TATGD ALTYA ENGHTDV +VL++ GA++EHESEGGRTPLMKAARAGHLCTV++L+S+GA+VNR T+ +H+V+SLACAGGH AVVELLL G +PT +LKD S+MLIEAAKGGH NV L++
Sbjct: 162 DGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAEN-----SHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEASQEGHLELVKYLLASGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLD 689 HSP 2 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 330/492 (67.07%), Postives = 391/492 (79.47%), Query Frame = 3
Query: 2466 NALQTFAASHNLELVNLGEITLPPAPFQLETEAEEGIMVADSARTLQNSINGMV----REDPIGECSSLPIGECSSLPSI-ETTLPVPAQSPVTPPLSPAIDIDQSTDSNHDTALTIACAGGHDELVQLLLARGSNIEHRDKKGCTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNHGAEINSRTGSKLGISPLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTGLTPLMEAASGGYVDVGRVLIDRGADVNAIPVPSSRDTALTIAADKGHYKFAELLVVRGAVVDVRNKKGCTPLWLSAHGGHLDVCQLLAREGADVNAMDNRAVSVLVAAFRKGNIKVVKWLVKHVSQFPPDSDCKRFIQTISDKDLLKKLDECMQIINAAKKRQEAEANKNASILLEELD 3926
N+L+ S N ++V +I + L + +G+MVA A+TL ++++ ++ P G SS EC + S +TT V +QS PP+ P++DID T+SNHDTALT+ACAGGH+ELV +L+AR + IEHRDKKG TPLILAATAGH ILL+ G DIEAQS+RTKDT LSLACS GRQEVV+LLL AN EHRNVSDYTPLSLAASGGYV IIK+LLN GAEINSRTGSKLGISPLMLAAMNGHV AVKLLLD GSD+NAQIETNRNTALTLACFQGR EVV LLLDR ANVEHRAKTGLTPLMEAASGGY +VGRVL+D+GADVNA PVPSSRDTALTIAADKGHYKF ELL+ RGA +DVRNKKG TPLWL+++GGH DV QLL + GADV+A DNR ++ L++AFRKG++KVV++LVK V+QFP D +C R+I TI+DK+LLKK +C++ I AK +Q AEANKNASILL+ELD
Sbjct: 947 NSLELQKVSGNQQIVGQPQIAITGHDQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVSTRVPTGSNSSSQTTECLTPESCSQTTSNVASQS--MPPVYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEANKNASILLKELD 1436 HSP 3 Score: 209.534 bits (532), Expect = 8.610e-54 Identity = 135/363 (37.19%), Postives = 204/363 (56.20%), Query Frame = 3
Query: 2766 STDSNHDTALTIACAGGHDELVQLLLARGSNIEHRDKKGCTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNHGAEINS-------------------------RTGSKL------GISPLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTGLTPLMEAASGGYVDVGRVLIDRGADVNAIPVPSSRDTALTIAADKGHYKFAELLVVRGAVVDVRNKKGCTPLWLSAHGGHLDVCQLLAREGADVN-AMDNRAVSVLVAAFRKGNIKVVKWLVKH 3758
S + +TALT ACAGG ++V++LL G+NIE ++ G TPL+ AA+AGH +LL+HGA I S+ K++AL+LAC G ++V LL + A+ EH+ +T L A G+V + ++LL+ GA++N G+ L G +PLM AA GH V LLL +G+++NAQ E + TALTLAC G +EV L+ A++E TPLMEA+ G++++ + L+ GA+V+A ++ DTALT A + GH A++L+ GA ++ ++ G TPL +A GHL Q L +GA+VN A N +V+ A G++ VV+ L+ H
Sbjct: 300 SQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCS---TPLMEASQEGHLELVKYLLASGANVHA--TTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAH 657 HSP 4 Score: 199.904 bits (507), Expect = 7.851e-51 Identity = 141/364 (38.74%), Postives = 207/364 (56.87%), Query Frame = 3
Query: 636 NTSLHKACGSGYDDVVELLIQHNADLEHQNENGHTPLMDAASNGHVKVAKLLLDAGAGINTHSSEFKESALTLACYKGHVDMVFFLLERGADQEHKTDEMHTALMEASMDGHVEVARLLLDHGAQVNMPADSFESPLTLAACGSHVELAELLIEHGANLEEVNDE-----GFTPLMEAAREGYLPMVALLLAHGANLYXXXXXXXXXXXXXXCCGGFLEVVAYLLDCGADIELGAST---PLMEAATEGHVELVKFLIEKGANVNA--ITATGDAALTYAAENGHTDVVEVLIEQGANIEHESEGGRTPLMKAARAGHLCTVEYLLSQGADV----NRKTSGGEHSVLSLACAGGHTAVVELLL 1685
+T+L AC G++++V +LI +A +EH+++ G TPL+ AA+ GHV V ++LLD G I S K++ L+LAC G ++V LL RGA++EH R + D+ +PL+LAA G +V + ++L+ GA E+N G +PLM AA G++P V LLL G+++ AQ E + TALTLAC G EVV+ LLD A++E A T PLMEAA+ G+ E+ + L++KGA+VNA + ++ D ALT AA+ GH E+LI +GA+I+ ++ G TPL A+ GH V+ L+ GADV NRK + L A GH VV+ L+
Sbjct: 1056 DTALTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEH---------------------RNVSDY------------TPLSLAASGGYVNIIKILLNAGA---EINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKI-----TPLMSAFRKGHVKVVQYLV 1378 HSP 5 Score: 192.586 bits (488), Expect = 1.130e-48 Identity = 126/357 (35.29%), Postives = 191/357 (53.50%), Query Frame = 3
Query: 435 ESLLSLACSAGYYELVQVLLAMNANVEDRGSKGDCTPLIEAASNGFVDIVKLLLQHGANVNAQSS-AGNTSLHKACGSGYDDVVELLIQHNADLEHQNENGHTPLMDAASNGHVKVAKLLLDAGAGINTHSSEF-----------------------------------KESALTLACYKGHVDMVFFLLERGADQEHKTDEMHTALMEASMDGHVEVARLLLDHGAQVNMP--ADSFESPLTLAACGSHVELAELLIEHGANLEEVNDEGFTPLMEAAREGYLPMVALLLAHGANLYXXXXXXXXXXXXXXCCGGFLEVVAYLLDCGADIELGASTPLMEAATEGHVELVKFLIEK 1391
++ L+LAC+ G+ ELV VL+A +A +E R KG TPLI AA+ G V +V++LL G ++ AQS +T L AC G +VV+LL+ A+ EH+N + +TPL AAS G+V + K+LL+AGA IN+ + + +ALTLAC++G ++V LL+R A+ EH+ T LMEA+ G+ EV R+LLD GA VN P S ++ LT+AA H + ELLI GA+++ N +G TPL A+ G+ +V LL+ GA+ +D + ++ TPLM A +GHV++V++L+++
Sbjct: 1056 DTALTLACAGGHEELVSVLIARDAKIEHRDKKG-FTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGAD----------------------------VDAADNRKI---TPLMSAFRKGHVKVVQYLVKE 1380 HSP 6 Score: 190.274 bits (482), Expect = 6.512e-48 Identity = 119/323 (36.84%), Postives = 188/323 (58.20%), Query Frame = 3
Query: 2790 ALTIACAGGHDELVQLLLARGSNIEHRDKKGCTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNHGAEINSRTGSKLGISPLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTGLTPLMEAASGGYVDVGRVLIDRGADVNAIPVPSSRDTALTIAADKGHYKFAELLVVRGAVVDVRNKKGCTPLWLSAHGGHLDVCQLLAREGADVNAM-DNRAVSVLVAAFRKGNIKVVKWLVK 3755
+L AC+ G V+ LL G ++ ++G + L LA +AG+ +LL A++E + ++ T L A S G ++V+LLL+ +A+ ++ + T L+ A +GG+V I+KVLLN GA I ++ G +PLM AA GHV ++LLD G+ +N + +ALTLAC++G ++V LL+ A+ EH+ T LMEA G+V+V R+L+D GA VN +P S ++ LT+AA GH + A LL+ RGA ++ N +G TPL +A GH ++ LL +GA++NA + + L A G +V +L+K
Sbjct: 208 SLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDH--NENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVN-MPA-DSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIK 526 HSP 7 Score: 186.422 bits (472), Expect = 8.710e-47 Identity = 122/325 (37.54%), Postives = 194/325 (59.69%), Query Frame = 3
Query: 2784 DTALTIACAGGHDELVQLLLARGSNIEHRDKKG-CTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNHGAEINSRTGSKLGISPLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTGLTPLMEAASGGYVDVGRVLIDRGADVNAIPVPSSRDTALTIAADKGHYKFAELLVVRGAVVDVRNKKGC-TPLWLSAHGGHLDVCQLLAREGADVNAMDNRAVSVLVAAFRKGNIKVVKWLV 3752
++ L +AC+ G+ EL Q+LLA +N+E R KG TPL+ A++ G+ +LL H AD+ +QS T +TAL+ AC+ G ++V++LL AN E N + +TPL AAS G+V + +VLL+HGA IN+ + ++ S L LA GH+ V+ LL+ G+D + + +TAL AC G EV LLLD A V A + +PL AA GG+V++ +LI+RGA++ V T L AA +GH + LL+ +GA ++ + ++ T L L+ GG +V L + GAD+ + + L+ A ++G++++VK+L+
Sbjct: 239 ESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQS-ATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHS-NEFKESALTLACYKGHLDMVRFLLEAGADQEHKTD-EMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEE--VNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADI---ELGCSTPLMEASQEGHLELVKYLL 555 HSP 8 Score: 163.31 bits (412), Expect = 8.943e-40 Identity = 114/327 (34.86%), Postives = 171/327 (52.29%), Query Frame = 3
Query: 2757 IDQSTDSNHDTALTIACAGGHDELVQLLLARGSNIEHRDKKGCTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNHGAEINSRTGS----------------------------KLGIS-PLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTGLTPLMEAASGGYVDVGRVLIDRGADVNAIPVPSSRDTALTIAADKGHYKFAELLVVRGAVVDVRNKKGCTPLWLSAHGGHLDVCQLL 3650
I+ ++ ++ALT+AC GH ++V+ LL G++ EH+ + T L+ A GH +LL+ GA + +D + ++ L+LA G E+ LL+ AN E N YTPL AA G+ ++ +LL GA IN++T +LG S PLM A+ GH+ VK LL G++V+A T +TALT AC G T+V +LL A++EH ++ G TPLM+AA G++ + LI +GA+VN ++ T +++A GH ELL+ GA R K G T L +A GGH +V L
Sbjct: 364 INTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPAD-SFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEASQEGHLELVKYLLASGANVHATTATG-DTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRA-TANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYL 687 HSP 9 Score: 154.836 bits (390), Expect = 3.231e-37 Identity = 120/369 (32.52%), Postives = 177/369 (47.97%), Query Frame = 3
Query: 810 INTHSSEFKESALTLACYKGHVDMVFFLLERGADQEHKTDEMHTALMEASMDGHVEVARLLLDHGAQVNMPAD-SFESPLTLAACGSHVELAELLIEHGANLEEVNDEGFTPLMEAAREGYLPMVALLLAHGANLYXXXXXXXXXXXXXXCCGGFLEVVAYLLDCGADI------ELGASTPLMEAATEGHVELVKFLIEKGANVNA-ITATGDAALTYAAENGHTDVVEVLIEQGANIEHESEGGRTPLMKAARAGHLCTVEYLLSQGADVN-------RKTS------------------GGEH---------SVLSLACAGGHTAVVELLLGRGGNPTMKLKDNSSM--LIEAAKGGHANVAHLLM 1784
I+ H+ ++ALTLAC GH ++V L+ R A EH+ + T L+ A+ GHV V +LLD G + ++ + ++PL+LA G E+ +LL+ GAN E N +TPL AA GG++ ++ LL+ GA+I +LG S PLM AA GHV VK L++ G+++NA I + ALT A G +VV +L+++ AN+EH ++ G TPLM+AA G+ LL +GADVN R T+ G H + L LA GGH VV+LL+ G + + DN + L+ A + GH V L+
Sbjct: 1047 IDAHTESNHDTALTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAA----------------------------------SGGYVNIIKILLNAGAEINSRTGSKLGIS-PLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGAD--VDAADNRKITPLMSAFRKGHVKVVQYLV 1378 HSP 10 Score: 154.451 bits (389), Expect = 4.963e-37 Identity = 95/263 (36.12%), Postives = 143/263 (54.37%), Query Frame = 3
Query: 2784 DTALTIACAGGHDELVQLLLARGSNIEHRDKKGCTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNHGAEINSRTG-------------------------------SKLGISPLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTGLTPLMEAASGGYVDVGRVLIDRGADVNAIP 3479
++ LT+A GGH EL LL+ RG+N+E + +G TPL+ AA GH +LL GA+I AQ++ T++TAL+LAC G EV + L+ + A+ E + TPL A+ G++ ++K LL GA +++ T S+ G +PLM AA GH+ V+ L+ +G++VN N +T ++LAC G VV LLL A+ HR K G T L+EAA GG+ +V L+D +V ++P
Sbjct: 439 ESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIE---LGCSTPLMEASQEGHLELVKYLLASGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVP 698 HSP 11 Score: 147.902 bits (372), Expect = 4.662e-35 Identity = 99/297 (33.33%), Postives = 155/297 (52.19%), Query Frame = 3
Query: 321 QSEQGTRSLVEACIEGDIAAVRKLLDEGRSVHEPTDE-GESLLSLACSAGYYELVQVLLAMNANVEDRGSKGDCTPLIEAASNGFVDIVKLLLQHGANVNAQSSAG------------------------------------NTSLHKACGSGYDDVVELLIQHNADLEHQNENGHTPLMDAASNGHVKVAKLLLDAGAGINTHS-SEFKESALTLACYKGHVDMVFFLLERGADQEHKTDEMHTALMEASMDGHVEVARLLLDHGAQVNMPADSFESPLTLAACGSHVELAELLIE 1097
+ ++G L+ A G + V LLD+G + ++ ++ LSLACS G E+V +LLA AN E R + D TPL AAS G+V+I+K+LL GA +N+++ + NT+L AC G +VV LL+ A++EH+ + G TPLM+AAS G+ +V ++LLD GA +N +++ALT+A KGH L+ RGA + + + +T L AS GH +V +LL+ GA V+ + +PL A HV++ + L++
Sbjct: 1084 RDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHR-NVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQYLVK 1379 HSP 12 Score: 122.865 bits (307), Expect = 1.796e-27 Identity = 85/254 (33.46%), Postives = 123/254 (48.43%), Query Frame = 3
Query: 1044 LTLAACGSHVELAELLIEHGANLEEVNDEGFTPLMEAAREGYLPMVALLLAHGANLYXXXXXXXXXXXXXXCCGGFLEVVAYLLDCGADIELGAS----TPLMEAATEGHVELVKFLIEKGANVNAITATGDAALTYAAENGHTDVVEVLIEQGANIEHE--SEGGRTPLMKAARAGHLCTVEYLLSQGADVNRKTSGGEHSVLSLACAGGHTAVVELLLGRGGNPTMKLKDNSSMLIEAAKGGHANVAHLLMN 1787
LTLA G H EL +LI A +E + +GFTPL+ AA G++ VV LLD G DIE + TPL A + G E+V L+ +GAN + L+ AA G+ +++++L+ GA I S+ G +PLM AA GH+ V+ LL G+D+N + ++ L+LAC G VV LLL R N + K + L+EAA GG+A V +L++
Sbjct: 1059 LTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHV----------------------------------GVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLD 1278 HSP 13 Score: 100.908 bits (250), Expect = 7.332e-21 Identity = 43/101 (42.57%), Postives = 73/101 (72.28%), Query Frame = 3
Query: 4590 KKAKRVDDEWKEVTRSIPHTKSRKILIPAALISRVIGRGGCNVNAIREHTGAHIDIDTNRKKANGDCMVTIKGSQQATKQAGNLIQSLIDDPDSNVAEILP 4892
K+ ++ ++ WKEV R +S+K+ +PA+++SR++GRGGCN+ AI++ TGAHID+D + K NG+ M+TI+G ++T+ A LI +LI DP + +++P
Sbjct: 1681 KRGQKREEGWKEVVR-----RSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDK-NGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIP 1775 HSP 14 Score: 100.138 bits (248), Expect = 1.536e-20 Identity = 77/244 (31.56%), Postives = 114/244 (46.72%), Query Frame = 3
Query: 3162 NSRTGSKLGISPLMLAAMNGHVAAVKLLLDRGSDVNAQIETNRNTALTLACFQGRTEVVGLLLDRHANVEHRAKTG-LTPLMEAASGGYVDVGRVLIDRGADVNAIPVPSSRDTALTIAADKGHYKFAELLVVRGAVVDVRNKKGCTPLW----------------------------------LSAHGGHLDVCQLLAREGADVNAMDNRAVSVLVAAFRKGNIKVVKWLVKHVSQ--FPPDS 3782
NS ++ L A +G V AV+ LLD G VN E + L LAC G E+ +LL HANVE R G +TPLM A+SGGY+D+ ++L+ ADVN+ ++ +TALT A G ++L+ GA ++ N+ G TPL L+ + GHLD+ + L GAD + + L+ A G+++V + L+ +Q P DS
Sbjct: 197 NSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGE-SLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNS--QSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADS 437 HSP 15 Score: 99.7525 bits (247), Expect = 1.629e-20 Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 3
Query: 1425 DAALTYAAENGHTDVVEVLIEQGANIEHESEGGRTPLMKAARAGHLCTVEYLLSQGADVNRKTSGGEHSVLSLACAGGHTAVVELLLGRGGNPTMKLKDNSSMLIEAAKGGHANVAHLLMN 1787
D ALT A GH ++V VLI + A IEH + G TPL+ AA AGH+ VE LL +G D+ ++ + + LSLAC+GG VV+LLL RG N + + + L AA GG+ N+ +L+N
Sbjct: 1056 DTALTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLN 1176 HSP 16 Score: 94.3597 bits (233), Expect = 7.270e-19 Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 3
Query: 2766 STDSNHDTALTIACAGGHDELVQLLLARGSNIEHRDKKGCTPLILAATAGHTATCHILLEHGADIEAQSDRTKDTALSLACSSGRQEVVELLLMSNANFEHRNVSDYTPLSLAASGGYVGIIKVLLNH 3149
+T + DTALT AC GH ++ +LL G+++EH + G TPL+ AA AGH T L+ GA++ + T +SLAC+ G VVELLL A+ HR T L AA GG+ ++ LL++
Sbjct: 563 ATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDY 690 The following BLAST results are available for this feature:
BLAST of TCONS_00000956 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2024, MARIMBA.