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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000913 ID=TCONS_00000913|Name=TCONS_00000913|organism=Clytia hemisphaerica|type=transcript|length=1373bp
ATGAATCgcaatttacaaatttgataaaataaagAATGTACATAAATGCG
GCTTCAAATAcactttgttttctttcttatGTTCCTTAGCTGGAAGTGTA
ACTGGCGCAATCGACTGTAGTTCTAGAATGCcgaaaaaaatgttattttg
tttCATAGAATGTCTCATAGTAGTTAATTTGCTATCTgcagcgaaaataa
aaaatgctgatAGTTGTACCACTTATCCTTGTGTGATATTCGAGGAGAAT
TTCGATACATTGGATCATAAGACATGGACCCATTGGATATCTGCCGCAGC
TACTGGTAACAAAGAATTCCAGTATTATGCTAACAATCGATCCAATAGTT
ATGTCAAAGAGGGACGTTTGAATCTGAAAGCCACTTTAACTAATAATACA
TTTGATGATGAATTTCTAACTGGCGGCGCTTTGGATTTATGGCCGGGTAA
CAAATGCACCTCAAATCGTGGAAACAAAGGATGTTATTATAAAGGGAGTA
AAGAAATCATTGTAAAACCCATCCAATCTGCTGCAATCAGTACCGAGGGT
GTGTTTTCTTTTAAATATGGTGAATTAGAAGTGTCAGCAAAAATGCCGAA
AGGTGATTGGCTATGGCCTGCTGTCTGGTTGATGCCAGAGCTTGAGGAAT
ATGGGAACTGGCCAGCTTCTGGTGAAATTGATCTGATCGAATCCAGAGGA
AACACTCATCTGACTGATGATGACGCAAAAACCGACGTTGGCAACAAACG
AATCATGCAATCGTTACACTGGGGTCCTTATTTCCCCTTAAATGGACAAC
CGTATACCCTTGCCAAAACAAACAAGAAAACAGGATCATTTGCAGATGCC
TTTCATAAATACAGGATGACTTGGACACCTGATAGTATTATATTCTTTAT
CGATTCACATTGTACTTTAAATGTATCGAGATCAGATACTAGTTTCTGGG
AATTGGCAAAGTTTCCAAGCTATTTAGATAACCCATGGCAAGGTGGTACA
AAATTAGCACCTTTCGATAAGaactttcatattattatcaatttagCTGT
TGGTGGGACTAATAACTATTTTCACCCTACCTATAAGCCAACACCACCTT
GGAAATCAAATGACGAGAAAGCTCAGACTGAATTCTGGGATGCCAGATCA
CAATGGTTACCCACGTGGGATGACCCAGTCTTTCAAATAGATTATGTTAA
AGTAACAAAGACGGTAAAAAACCCATAGTTTTTGAACATTGTAAAgtctt
aagagccattttctgtaagaaTCAGACAGGTCGAGGAAGTGATATCCGca
gattttgccaatttttggatattttgctcaaatacatgaaaataacatcc
tgtgaaaatttttttgaaaaatc Run BLAST on NCBI protein sequence of TCONS_00000913-protein >TCONS_00000913-protein ID=TCONS_00000913-protein|Name=TCONS_00000913-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MPKKMLFCFIECLIVVNLLSAAKIKNADSCTTYPCVIFEENFDTLDHKTW
THWISAAATGNKEFQYYANNRSNSYVKEGRLNLKATLTNNTFDDEFLTGG
ALDLWPGNKCTSNRGNKGCYYKGSKEIIVKPIQSAAISTEGVFSFKYGEL
EVSAKMPKGDWLWPAVWLMPELEEYGNWPASGEIDLIESRGNTHLTDDDA
KTDVGNKRIMQSLHWGPYFPLNGQPYTLAKTNKKTGSFADAFHKYRMTWT
PDSIIFFIDSHCTLNVSRSDTSFWELAKFPSYLDNPWQGGTKLAPFDKNF
HIIINLAVGGTNNYFHPTYKPTPPWKSNDEKAQTEFWDARSQWLPTWDDP
VFQIDYVKVTKTVKNP Run BLAST on NCBI transcript from alignment at sc0000005:523279..524651 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000913 ID=TCONS_00000913|Name=TCONS_00000913|organism=Clytia hemisphaerica|type=transcript|length=1373bp|location=Sequence derived from alignment at sc0000005:523279..524651 (Clytia hemisphaerica)
gatttttcaaaaaaattttcacaggatgttattttcatgtatttgagcaa
aatatccaaaaattggcaaaatctgCGGATATCACTTCCTCGACCTGTCT
GAttcttacagaaaatggctcttaagacTTTACAATGTTCAAAAACTATG
GGTTTTTTACCGTCTTTGTTACTTTAACATAATCTATTTGAAAGACTGGG
TCATCCCACGTGGGTAACCATTGTGATCTGGCATCCCAGAATTCAGTCTG
AGCTTTCTCGTCATTTGATTTCCAAGGTGGTGTTGGCTTATAGGTAGGGT
GAAAATAGTTATTAGTCCCACCAACAGctaaattgataataatatgaaag
ttCTTATCGAAAGGTGCTAATTTTGTACCACCTTGCCATGGGTTATCTAA
ATAGCTTGGAAACTTTGCCAATTCCCAGAAACTAGTATCTGATCTCGATA
CATTTAAAGTACAATGTGAATCGATAAAGAATATAATACTATCAGGTGTC
CAAGTCATCCTGTATTTATGAAAGGCATCTGCAAATGATCCTGTTTTCTT
GTTTGTTTTGGCAAGGGTATACGGTTGTCCATTTAAGGGGAAATAAGGAC
CCCAGTGTAACGATTGCATGATTCGTTTGTTGCCAACGTCGGTTTTTGCG
TCATCATCAGTCAGATGAGTGTTTCCTCTGGATTCGATCAGATCAATTTC
ACCAGAAGCTGGCCAGTTCCCATATTCCTCAAGCTCTGGCATCAACCAGA
CAGCAGGCCATAGCCAATCACCTTTCGGCATTTTTGCTGACACTTCTAAT
TCACCATATTTAAAAGAAAACACACCCTCGGTACTGATTGCAGCAGATTG
GATGGGTTTTACAATGATTTCTTTACTCCCTTTATAATAACATCCTTTGT
TTCCACGATTTGAGGTGCATTTGTTACCCGGCCATAAATCCAAAGCGCCG
CCAGTTAGAAATTCATCATCAAATGTATTATTAGTTAAAGTGGCTTTCAG
ATTCAAACGTCCCTCTTTGACATAACTATTGGATCGATTGTTAGCATAAT
ACTGGAATTCTTTGTTACCAGTAGCTGCGGCAGATATCCAATGGGTCCAT
GTCTTATGATCCAATGTATCGAAATTCTCCTCGAATATCACACAAGGATA
AGTGGTACAACTatcagcattttttattttcgctgcAGATAGCAAATTAA
CTACTATGAGACATTCTATGaaacaaaataacatttttttcgGCATTCTA
GAACTACAGTCGATTGCGCCAGTTACACTTCCAGCTAAGGAACataagaa
agaaaacaaagtgTATTTGAAGCCGCATTTATGTACATTctttattttat
caaatttgtaaattgcGATTCAT Coding sequence (CDS) from alignment at sc0000005:523279..524651 >TCONS_00000913 ID=TCONS_00000913|Name=TCONS_00000913|organism=Clytia hemisphaerica|type=CDS|length=1101bp|location=Sequence derived from alignment at sc0000005:523279..524651 (Clytia hemisphaerica)
CTATGGGTTTTTTACCGTCTTTGTTACTTTAACATAATCTATTTGAAAGA
CTGGGTCATCCCACGTGGGTAACCATTGTGATCTGGCATCCCAGAATTCA
GTCTGAGCTTTCTCGTCATTTGATTTCCAAGGTGGTGTTGGCTTATAGGT
AGGGTGAAAATAGTTATTAGTCCCACCAACAGctaaattgataataatat
gaaagttCTTATCGAAAGGTGCTAATTTTGTACCACCTTGCCATGGGTTA
TCTAAATAGCTTGGAAACTTTGCCAATTCCCAGAAACTAGTATCTGATCT
CGATACATTTAAAGTACAATGTGAATCGATAAAGAATATAATACTATCAG
GTGTCCAAGTCATCCTGTATTTATGAAAGGCATCTGCAAATGATCCTGTT
TTCTTGTTTGTTTTGGCAAGGGTATACGGTTGTCCATTTAAGGGGAAATA
AGGACCCCAGTGTAACGATTGCATGATTCGTTTGTTGCCAACGTCGGTTT
TTGCGTCATCATCAGTCAGATGAGTGTTTCCTCTGGATTCGATCAGATCA
ATTTCACCAGAAGCTGGCCAGTTCCCATATTCCTCAAGCTCTGGCATCAA
CCAGACAGCAGGCCATAGCCAATCACCTTTCGGCATTTTTGCTGACACTT
CTAATTCACCATATTTAAAAGAAAACACACCCTCGGTACTGATTGCAGCA
GATTGGATGGGTTTTACAATGATTTCTTTACTCCCTTTATAATAACATCC
TTTGTTTCCACGATTTGAGGTGCATTTGTTACCCGGCCATAAATCCAAAG
CGCCGCCAGTTAGAAATTCATCATCAAATGTATTATTAGTTAAAGTGGCT
TTCAGATTCAAACGTCCCTCTTTGACATAACTATTGGATCGATTGTTAGC
ATAATACTGGAATTCTTTGTTACCAGTAGCTGCGGCAGATATCCAATGGG
TCCATGTCTTATGATCCAATGTATCGAAATTCTCCTCGAATATCACACAA
GGATAAGTGGTACAACTatcagcattttttattttcgctgcAGATAGCAA
ATTAACTACTATGAGACATTCTATGaaacaaaataacatttttttcgGCA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000913-exon-sc0000005-1491911889:523279..524651 | TCONS_00000913-exon-sc0000005-1491911889:523279..524651 | Clytia hemisphaerica | exon |
| TCONS_00000913-exon-sc0000005-1510915933:523279..524651 | TCONS_00000913-exon-sc0000005-1510915933:523279..524651 | Clytia hemisphaerica | exon |
| TCONS_00000913-exon-sc0000005-1575043694:523279..524651 | TCONS_00000913-exon-sc0000005-1575043694:523279..524651 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:523279..524651 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0005975 |
carbohydrate metabolic process |
| molecular_function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
Blast
The following BLAST results are available for this feature:
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