TCONS_00000870 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000870
Unique NameTCONS_00000870
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2001

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000870 ID=TCONS_00000870|Name=TCONS_00000870|organism=Clytia hemisphaerica|type=transcript|length=2001bp
TNCACGATGAGAAACCAAGAGAAATCCCTGAGAACACGAGACAATTGAAA
CCTGTCACTTTGCAGGGCGAAGGCTGGGGATCAGTGCACTCAACCCAAAT
GGTCTTGAACAACTTGTTTTACTTGACTGTGAAATACGAAGAATATTACA
GCAAAGAGATTGAAGAATGCTGGTCCGCTTTGTGTGCTCGTTGGGAGCAA
AATGTGACGCGTATATTGGATTATTTGATTGTGATGGCTGGTGTATGCGG
CACTCCCGTCTTGATGCATGCGAAGAAAGTAGCAATTTATATTGCACGCG
CTAAAACGGAGAAAACAATTCACGTGTTGACAGAAGAACTCAGACTTACT
GAAATCGTTACCAACTTTTGGGACCGTTTGGACTGTCCACCGTACATTAA
ACCACTGAACAAATGTATAACGCCACCATCCACCGTATCGACAGGTCGTA
AGAATGAAGACTACAAGAAAAACATTACGTCACCTAAGAAACAACCATCG
CTGGACAGTGAATATCCAGAAATGAGAAGCGAGTCGCCCTCTTTTCCTCA
GCAAGCACCCTTCAATAATCGACTAAGTACTGAAAGATCGTCTATCAACT
CTGCAAGGAATTTTGCTGAATCTGtgttagaATCAGTTAAAGCCAGTCAG
ATGGCATCACAAATCGAACAAAAGAAAACGGAGACAGGCTCTTCAGAGTT
ATGGATGTTGAATTGGGTCTTGAAGGCTCATTCAATGCAAGGCGTCGGTC
TCCCATTGCCAATGCCTTACGAGTTACAATATTTTGCGCCAATAACTCAA
GCTTTCCCTTTGGCTTCTCCTCCTGCTCAATTATACAGGTGTAACTTCTC
GTTGATGCTATTGGCAGAGATTGTTTCAGACCAGCGAGATATTTCTTGGA
TATTCTATCTACCGTTGCTTCTTCACGTCGGCTTCCTAGGACTGGATCAT
GCCAAGCCATTGgttcatgaaaattgtaaacgTCTCATCATTAACCTTCT
GGTAGTGTTAGTATGTGATGGTGATCGATCAACCATTGCCAAAGCTCTGA
TGGACTTCCACACTGTCTCCAGTACGGCACTAAATCGTAGTGCAAGTTTG
AAGAACTCCAACGTGAAAACAAGTGCTGATGGTGCTGTACTGGAATCGGA
CGAACTACTCAAAGATGAAGACCGAGAGAACTTGGTTGCACAAGCAGGTG
GTCCAGAACTGGAAGAAAGGGGACTAAGTATCGATGAAAGAGCAAGAGAA
GTCATTGAATATCTCGCCAAAAGCGATTGTAAGCCATTGTGGGCATTTGA
AGACATTACTCCACGAAATGGCACAGTGAAGAGTGCGGACCAACTCGAGT
CATTCCTACAAATCATCGTTCAACTCTTTGATGATGCCCTTCCAAACGCC
CTTCTACCAGGGCGGTGGGCGCGTGAATCTTTACACTGGGCGACGTCGTG
CTCGTCACGCCATTATGCGGGCCGTTCTTTCCAGATTTTCCGTTCGTTGA
AAATTCCCTTATCGTGGCCGATGTTGTCGGATATCTTGCAGCGATTGGTT
GAATCGGTCGCCGACAGCAGTGACGACGTTCAGgGATATTTCATGGAAAT
TCTAATGACATTCTTAGCAGAAGTTGATTATGCATTCAATGACCGTCCAA
AATCGGTTCTGGAACAAATGGACACTATAGCCAGACGTACTAGTAGTTTA
CAAGATTTGAACCCGGCCGAACAGCAAGAGCAGGGACAAGACTTGGTTGC
CGAAAGTATGGACACCCTTAATGCGATCGGGAAGCCTCCTCACAACACAT
CCACTATGATATCGCAGCAACACATACGATCGCATAGTTACGACGTTGAT
CACAGTCACAGTACCAGGCTTCGTGTTCAAGGATTTGAGGGCAAGCGTAA
AGATCGAAGATATGATAGCGAAATGGCATTACAAACACATTCCGTCATGA
ACTCGCCTCTTGCATCTTCTACCACATCAAGCAAAGAATTTAGCGAATTT
C
Run BLAST on NCBI

transcript from alignment at sc0000005:1163886..1174656-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000870 ID=TCONS_00000870|Name=TCONS_00000870|organism=Clytia hemisphaerica|type=transcript|length=10771bp|location=Sequence derived from alignment at sc0000005:1163886..1174656- (Clytia hemisphaerica)
TNCACGATGAGAAACCAAGAGAAATCCCTGAGAACACGAGACAATTGAAA CCTGTCACTTTGCAGGGCGAAGGTACTTTCTCTCGGATGCGCCCATCCCA GGGCATTTCTTATTAAAACCCACAACCTGATCGTTGATTATTATAAAAAT ATTTTGCAATGTTTTTCTATTTAAGACCTTTCCCAGCTTTTCTGCTCATG ATTTTCCATATTTCAATTCCCTTTGAAAAATGTTCCATCCCCTGTTTAAA TTTTGGGTACCCGAGCGTAAAAGTCTAATAATATTAATTGTGAACTAATT AATCTGTAGTCTCAGTTTTTAGAATACATCCTAATGTTTTCTATAGTACA GTTCTCCGCCTTGATTCCAAGTCTAAAACATCGTTTGTTATGATATAGGC TGGGGATCAGTGCACTCAACCCAAATGGTCTTGAACAACTTGTTTTACTT GACTGTGAAATACGAAGAATATTACAGCAAAGAGATTGAAGAATGCTGGT CCGCTTTGTGTGCTCGTTGGGAGCAAAATGTGACGCGTATATTGGATTAT TTGATTGTGATGGCTGGTGTATGCGGCACTCCCGTCTTGATGCATGTAAG ATAATCACCGTTTTTTGAATAGTAATATAAAGATGATAAAGGCCTTTCTT TGTAATGGTTTTTGTGGTTAAGCGTGTCTGTTTTAACTTAATTTTTCCTT TATTAAAACACTAAAAACAGGGGCATAAATACGAGCCTAAATTGCAGAAT ACTTCTAAACATAGATATAGTCCCCCCCCCCCCCGCTAGGAACTAGAATT GATATTATTATGAGCGTTTTAAATTAAATATCCCCGCTCAAAAGTCCATT AAAGTTTTCACTTGTCAGAATTTTATGTGGGACTAAAACCAGTGACCAAT GTCACGCAGACTTTACTCCATTCCAATAATGATCCATTTAACTATTTTTC ACATGTTTAGGCGAAGAAAGTAGCAATTTATATTGCACGCGCTAAAACGG AGAAAACAATTCACGTGTTGACAGAAGAACTCAGAGTAAGACGATTTTCT TTTTAGATTTTCGGTGCATTATTCCTTTTCCTGATGATAGATCGTAAATT TATTTTGTTGTGTTTCTGGCTTTCAATCCAATTTCAATATGACAACCTCT TTCGCTGTCCACTATTTTCCATTCGCCATTTCTGTTGTATCGTCCATCAC AAGCGTAACATATTAACTGTTAGAATATTTGGAACTATCCGACGATAAGT CACGCCTTTACAGGATCTGAAACCGAACCAAAATGTTCGAACTTTTCGTT CCGATTAAAAGAAAATTCATGATTCGGGTATTTTCGGTTACCGCACTTTG AAAAAGGCGAAAGCAATTTATTTTGGTTAAAGGGGAAACTACTTACAGTA ATTTGAGATCTACGAACGTCTCTATTATAATATTACGCCCCTTGCTTGCT GGGAAATAGGTTAGTCCAACTGATAATCTTCTTTCACTTCTTTATTCAGC TTACTGAAATCGTTACCAACTTTTGGGACCGTTTGGACTGTCCACCGTAC ATTAAACCACTGAACAAATGTATAACGCCACCATCCACCGTATCGACAGG TCGTAAGAATGAAGACTACAAGAAAAACATTACGTCACCTAAGAAACAAC CATCGCTGGACAGTGAATATCCAGAAATGAGAAGCGAGTCGCCCTCTTTT CCTCAGCAAGCACCCTTCAATAATCGACTAAGTACTGAAAGATCGTCTAT CAACTCTGCAAGGAATTTTGCTGAATCTGGTAAGGATAAGGTTATTCTAA GAATTTTATTTGACAATTCATTCCAGAAAAGAATTTTCAAGGTGGTTAGG GAGTCAAGGGCACTCTTTAGAACCTCCTAATAAAGACTCCTTATTTTAGA TACTTTGTGTAACGTTCTCCGCCCCCGTTCGTTTGACATAGTTCAATTTT TATCGCTTTTGGATTTGCAACTACTTAGCCTTATCTATTTTTATTTAACG ATGTTTAGTTTAGGGTTATGTTTGTTTACTTTTAGTCCTTTTAGACTTCA GAGGTGTTTTTACGTAACCAAGCCTTCCCCACGGGTTAATTAGTGGTGCA GTAGCTTCAACATACAAGCTTCTAGAGTTAATTGTGCTATCGTCCCTCAA ATAACACAAACTATTTCTTTTTAGTGTTGGAATCAGTTAAAGCCAGTCAG ATGGCATCACAAATCGAANAAACTATTTCTTTTTAGTGTTAGAATCAGTT AAAGCCAGTCAGATGGCATCACAAATCGAACAAAAGAAAACGGAGACAGG CTCTTCAGAGTTATGGATGTTGAATTGGGTCTTGAAGGCTCATTCAATGC AAGGCGTCGGTCTCCCATTGCCAATGCCTTACGAGTTACAATATTTTGCG CCAATAACTCAAGCTTTCCCTTTGGCTTCTCCTCCTGCTCAATTATACAG GTAGGCATTTTATGCATGTTAATAGATCAGGCCAAACCAATAAGTTTCTC TTGCAAATTAGAAAAAACAGTTGGCTTTTGCTGCAGTTTGCTGTAGTTTT CTTCCTGCGGACTAAGCTTGATCAAAAATTTTGAAGTACAGGTCCCAATA TAATTTTGAGTATAAACACGATTTTACCATACCTTGCTTGATTCACTTTT TCCAGGTGTAACTTCTCGTTGATGCTATTGGCAGAGATTGTTTCAGACCA GCGAGATATTTCTTGGATATTCTATCTACCGTTGCTTCTTCACGTCGGCT TCCTAGGTATGGAACAATGTAAACATACCCTTTTGCAGTTAGTAGACCTC TTCCTGGGAATCTCGATCGAATTGTATTGGATATAAACGAAGACATACGA ATGAACTTTCCCCTTAGCTTTTTCCACTGAATTATATCCTAGTGAGTAAT TAATTTCTCTCTCCTCCTTAAATTGTAAACCTTTTTTGCTACACTATTTT ACATAGTTTAAACCAAGATTTTTAATGTTCTTGTCTTTTATCAATAGGAC TGGATCATGCCAAGCCATTGGTTCATGAAAATTGTAAACGTCTCATCATT AACCTTCTGGTAGTGTTAGTATGTGATGGTGATCGATCAACCATTGCCAA AGCTCTGATGGACTTCCACACTGTCTCCAGTACGGCACTAAATCGTAGTG CAAGTTTGAAGAACTCCAACGTGAAAACAAGTGCTGATGGTGCTGTACTG GAATCGGACGAACTACTCAAAGATGAAGAGTAAGAAAAAGAAACCTTTCT GTAAAACAGTAGTTCGTTCAAAAATTAAACCTATCAAAAGAAAGTTATGA AATAGTAATTCTTGGCTGACTTTTTATAAGAATCACTATGGTGATTGAAA GACCAAGTCCCGAATTTTTCAAACACAAACATTGTTTCTTTGGGGCAATT CTGTGGTGATGAAGAAGATAGACCTAAGAACCAATATGCCTAACCGTGAT CTCAACATCATTACCATGATGGCAATCCTGAATTACTTTTGGAAAGCTAA GAACAAATCATACACAGATTTGAAATATTATGTTTCAATAAACTTCATTA TAGACCTTATTCCCTTTATTCTTTTCAGCCGAGAGAACTTGGTTGCACAA GCAGGTGGTCCAGAACTGGAAGAAAGGGGACTAAGTATCGATGAAAGAGC AAGAGAAGTCATTGAATATCTCGCCAAAAGGTCAGTCTCGTTTTTAACGG CGAATTATCTTTCACGCCAAAGCAGATTTAAAGCGGTTTTAAGTGAAACA ATGAAAAATTTGAATTTCATTTGAAATGGTTTCCAAGAACTAACTAATTC TCCGACTAGGAGACCGGGAAAATGCTCAAAAAGCACTTCAATTAACTATT CTTATAAAGTAGGGTTTTTTCAATTGTCAAGTGCGAATTTCTGAAGTTGA ATAATTTATATTTTCATTTATTTTCCGTTCTCAGCGATTGTAAGCCATTG TGGGCATTTGAAGACATTACTCCACGAAATGGCACAGTGAAGAGTGCGGA CCAACTCGAGTCATTCCTACAAATCATCGTTCAACTCTTTGATGATGCCC TTCCAAACGCCCTTCTACCAGGGCGGTGGGCGCGTGAATCTTTACACTGG GCGACGTCGTGCTCGTCACGCCATTATGCGGGCCGTTCTTTCCAGATTTT CCGTTCGTTGAAAATTCCCTTATCGTGGCCGATGTTGTCGGATATCTTGC AGCGATTGGTTGAATCGGTCGCCGACAGCAGTGACGACGTTCAGGTAGGA AAAAATTGTTAACAAAAAAATAAAATTCGGATTTATTTTGAAGCCATTTT TCAAAATTTAAAATTTAAAAACAGTCAAGCGATATATTTCGGTTGTATCG CCATTCTCAAGCTTATAAAAATGTTCTAAAAGTGTTCTATCAAAAGTGGA ATTTGTTTTTTTTTCTACGACGACAACAACGACGACGACTGGGAATTGGA TTTTATTTTTTCTCCAAAATTTGAGTTTTAGTGTTCTTATAAACTGGGTT CTAAATGAAAAAGTGTGTACAGTCTATAATAGGGAAAATTTGACGTGAAA GTCAAAGGAATGCATTTTAGTAGTTTTTTACCAATAAACTGTTTGAACGG TCGATTTTTTATTGACTCGAACACTGAGGTTTTCTTTTATGAATTGTACA TCAAGAAAACATTTTTCCTGTCTTTCTTTTCCATTGACTACAGATTTATT TCCCTTCCGATATTTTGATGAGCATTTTTTTGTGTTCTTAAAACACAAGT TTAGATCCTTTTTTATGATTTTTCGTTTCAAGATCTTTGGCGGGTTGATT TAACCCTATTATTATCAAGCTATTTGGGAGTTCGTATTTTGAAAAATACC CTTTACTAAAACGGCTTAATGTTGAGTGGATAAACATTTTTCTGAAAGCA AAAAGAATTTAAAAAAAATGAGAAAATCTTTTTTAAAATGAATTTTGGAT ACTTTTTTGAAACGTCACATTGATATCTAAAACCTGTTAAAATTTGAAGT TAGTTTGATAAATGTATCAAAATTTATGCCTGCATTAAAAAGTCATAACA GTGATCTACTGGACATAAAATTTGGTGTATTTTTTTCTAACAAAAGACAG AATCTTTCAGGATGTTTATACTATTTTCAGTGATTTATCAGCTAAATAAT GCGAAAGTGCTTAAAACACTTCTATGATAAAAATAGTTTAGGGGGTCATA TTCCATTAATTTTGAATTTCTGGACGATGCAACATGTCCGAAACATTGAA ACATTTGCGAATACATTAAAAAAAAAACATTTATGAAGACACTTAAAAAC CGAGCTTAAATGCTAAAAAATTTAGGACTCCCAGGGACTCCACACGGGGC TGAAAATGAAACTGTTTGAGCATTGACTTGTTATTTCAAAAAAATATTGA TTATATTTTAAATTTCAATACGGTTAATGTATTTTGATTATCATTCGGCG ACGCAAAAAAATCTTAAGTTCATTTGAATGTTCGTTAAAGCTTTATAGCG AGTGCAAGTCACGATATTCATTTTCAGAGAGCCTTTTTGGAATTATTCCT ATTTTAAAGAAATCGACCCCATGGAAAACAACTTTTCTTTTACCTTTGAT GAGCAAGTTCCTTTGGATAAAAAAAGTGGTATTTTTCATTCGTTATGATA GCAAGAAAACTCCGCATTAATTCTCTTAATATATTGGATGGGCAGCTGAT TTTTTCACTAAGTTTTTGATTGGTTCTTTCTCGTGTCTAGGCTACGTTGT ATATTCCTTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGATATGAGCAC TGCTCTTGTTTTGAATATTGAAATTTTCCGGATAAATCGCATGCGCACTG AGGTTTTAATGAAACAATAGAAAGTTTCGAAACCTAAGCCAATCAGCTGT GTTTTAAACATTCTTTTATTTGAAATCACTATTGATAAACATCTTTTGTG AAAGTTGTCTATTATGTTTAAACCTATTAATAAGAAATTCCCGGTGGGGT TACTAGTGGCCGCCTATAGCAGTGCCTATAGACCAAGGGTAAGGTCTAAA AGCCTGGAGCTGTCTATTGTGTAGACTATCTCGTGTCATGATAATGTTTC TTATCATGGTTGAAAAGTCTTTCCCCATTTCATTTTAGATCAGTCTTTAA AGTTCTTTTATACTAGAACAGGCAGAAAATGAATAACACGGGATTTTTAA AACCTTCGGATGAAACTGCCGATCGAATCAAAGTACAAAGGGAGTCGCTT GAAGTTTACCTTGTTATTCTCTTGGTCACACTCTTGGTAACACTCCTTTT ACACGTGTTCGTCCAGTTCTGCATCCATAAGGCCCGTCTACACAATAACA ATTATTACCTAATCCGTAGTCTCTCCTTGGCTGATTCGTCGACTGTTATT CTTTCCATATTTTTGTGTCTACTTGCAATAATGAGGGTCGATTTTGAATA TAAAGGAGTAAAGATGTTTCTATCAGTTTTAATGTTTGGCTCGTTCACGA CTTCCTTACTGATTACAATAATGATCGTCTCTGATCGATGGATCGCCATG CAATACGCCTTACGATACAACACTATTGTCACCAAACAAAGGATCGCACG TTTGATATTTCTGTCAAGTTTTCTATCTGTTGCTATCCTTTTTTTTTTAT TGACACCACCTCCAATGGGTGGGTTCCAGAATAACCAAAATCTCTTTGTC AATCCATACGTTGCAATATTCTCCGCCATCTCCAGAATAATAACTTGTAT CGTCATCCTCGTCATGGCCGCACTAACTATCCGAATTCGAAATCGCAATC AAGCTCACATTCAAAACATTGTTAATTTTCACGGTAACGAAGCTGAAAGA TTGCATACGATTCAAAGACTAACCAGAAGCATAAAAGATGTCTTGAAATT AAATATATGGACTTGTGTGTTTCTTGTTCCGCTGAGTATTTTATCTATAC TGAGGGCGTTTCATAGTTTCCAAACACAAGAATTTGGTGTATTGGTCGCC TTTTTCAATTTAAATCTCATTTCGAACCCGATTGTCTATCTGACCTGTTT CACACAGATACGTAAATATTGGTACCGTGCTTTATTTGTTAGAAATACTA TAGACATCCAGGCAAATTGATGACACTAATTGACACTGCAGTTATATGAT AATTAGAGATTTTATCTAGCCAAGAACAGAGACTAGGTAATGTAATGAGG GATAGAACCATCCCTACGTGGAATAAATTGCCGTCTGAGATGGTAGCTGC TGATTTCATAAAAGGCTTCAAAGAAAAGTTGAAAGAAGCATCCAAAGAAG TTCGATACACGAAATTTGTAAAGTGAGATTGGTTTAGAGGCCACTGAGTT CCTACAACCTGTAAAACATTCTTAGTTACCATATTTAACAGTTTTAATTT AATCGTTGCTAAATCTTAATTGGCCACCCAAAACATGTTAGTTTTCCTTC AACGGCTTAAAATTTATAAAACAAAATTTGAAAGGATTTGGTTTTTGGTG ATATATATTTTTTTGAACCTGTCTCCATGCATGCCTCGCATTATTAGCCC TTTAACTGCCGTTCGTTTTTTTTAAGGTTCGACCATATTTGACAGATGTC GGCATATGCCGACAAGAGCGACCACAAAGCTTACCATCACATTTAGCTTT ATTTTCTGAAAAATATCAGAAATGTAATATATATGTTTACTTTGAGTTGA AATATGTAGAATTATGAAAAACATCTTTGAAATTTATTTTAATTATTTAA CGGCTATTTAATGAAATCTAGTTCAAAATCAAATTTTCAATAAACTTAAA AAAAACTCTGGCAAATAGGTCGAGATCTCTCTTGTCGGTATACGCCGACA GCGGCACTGAAAGGGTTAGGAAACTGAATGAAGATTTTCGAAGAAGATAT GAAGATATCAACCTTATAGGCTTTTTTACTAGGATTTTTTCCCCTTTTTA GTTTTTATTTCGAAGGGTGCCACCCCGCGCGCCCCCTTTAACAATTATTT GAGGGATTCGAACTAACATTTATGTTGGGCCCTCGCTTGTATTAATTTTA TTGAGAGTTGATGTAAACAGAGTGTGAGTAAGAAAGGATTACTTTGTTTT AGCTCATATAAATTTCACGTAAATCGGTTTCTTTTCAAGGCCATTCATAA TACAATAATGACCGGTTAGTGAGGGCTGTACTGAGAAATATTGCCCGGGG TCTAGTAACGACCGAGCTTGCGAGTTTTCATTCAGAAAAAATAATGACTT TTACATTACCTTAATTTTGATCTTAGGCGACTTGGATTCGAAATTTTCTA GGTTCTACTTTAAAATAAAAAACGACATTATACTTTGCTAACATAGTACT GTATAAGATTACCGTTAAATCAGGGGGGGGATCGGTAGTAAAATATCAGA CATATATGAGTAGTAAAAGGATTTTTACGAATTTTTTTACATACCACCAC CCAGACTCTTGGAAGAGGTATTTTTGGGACAGTTTTTGGGACAATTTGTC ATGGAGACCACCTATTTTTTGGTTACTTTTCGGACTGATTTTACAAAAAA AAACTAAAAAATGATTATTTCTGTGACCTGTGACACATTTTTCACTTTGT GCAAAAATTAATGTTTTGCCCTTAGAATTAAAGTCTTTTTTATATTGACA AAAAATTTCGAGAATTTTTCTTTTGCAGCAAACAACATTCCAACAGAAAA TTTTTTCAAATTATAAAAATTTTCAGATTTTTTCAGAAAAGTCATGCAAA AAATTAAAAGAATTACAAAAATAGCTAAAATTTGCTAATTTTATCAGTTT TAACTACCCAGGTAGTAAATTCTTTCAACATTTAACACATAGTTACCACC CATTTTAGTATTTAACTACCCTGGGTAGTAAAGATTTTTTTCGATTTTTC GTCACACCACCACCGTAGTAAACGTCATTATGTCTGAGATTTTACTACCG ACCCCCCTGGTTAAATCAAAGTTTCTTTATGAGTGATGATAAGTTTAAAA GTTATTTGTTAACTTTAGCCTCTAGTTGACAGGGTTCAATACCAAACAAT AAAATATATTCTGAAATTTTGAACCCACATAAGACTTGCGACGGTACTGC ATAGTAGCCCTTTTATTTATGTAAAAATAGTCGATATCTATGGAAATTTC GAAATCCATTGCCGTACGCCACGTTATACGTGAAATTTGCCTTTTTATTG CCTGGGGTGTTTGACCTAAATGAAGGTTCCATCTCTTTACCAGATGTCTT CATATGCCGACATGAACAAGCGCTGGTAATGTATACCATCACTTTCAGTT ATATAAGATTCTCTAAAAAATCTAGTTTAAAATCAAACTGTCAACCATTA AGAAAAACTGGCAGTAGAGTGAAATCTCTCATGTCGGCAAATGCCGTCAT GGAAACCGCTCATGTCGGCNATCTAGTTTAAAATCAAACTGTCAACCATT AAGAAAAACTGGCAGTAGAGTGAAATCTCTCATGTCGGTATAGGTACGAA AAGGGTCAGGAAAACATCTCTCCCATAATTTTAAGGTATTTGGTCAAAAA TTTCGAAATATTGAGTTTATGTATTCGAGATAAATCGAAGGAGACGGTAT AAAGCAAAGTTGACATGTCTCCAAAATCGCCCTCCACTTTGCTCAAAACG GTAAAAACACCAAAATACCGTCGTCTGTTTAGGTAAGCAAAGGCAATGTA GACTTTGTTTTGCGTTGACTTCACTTACCGTCACCCTCGATATCCTCCGA TATATAAACTCACTAATGTAGGTCAATACGATTGTTTCTTTTCATCCGTC TTGACTGTAATTGACATCATATTCACCTTTTTGTCTTTTTCAGGGATATT TCATGGAAATTCTAATGACATTCTTAGCAGAAGTTGATTATGCATTCAAT GACCGTCCAAAATCGGTTCTGGAACAAATGGACACTATAGCCAGACGTAC TAGTAGTTTACAAGATTTGAACCCGGCCGAACAGCAAGAGCAGGGACAAG ACTTGGTTGCCGAAAGTATGGACACCCTTAATGCGATCGGGAAGCCTCCT CACAACACATCCACTATGATATCGCAGCAACACATACGATCGCATAGTTA CGACGTTGATCACAGTCACAGTACCAGGCTTCGTGTTCAAGGATTTGAGG GCAAGCGTAAAGATCGAAGGTGAGTCCCGATTTAGTTGTTGATTTAGAGT CCGTTTCCATTTCGGTCTTATATCTGAGGTCTTTAGGGTTCATTTGGACA GCATACTTAAAATGTCAAACAGCTAGGTTAAAATCATAAAGTCGAAGAAC CACCCAGTTGCCCTAAGCGAACCCTAAATCTTGACTGACCCTTCCAAGTC CGCACTATTTCGAAACTGGAAAGTTTTGTTTAGAAATTGTTTCTTCAATT AGGGAGTCGCAGAGATCCGGCTTGCACTAGCCCGCTTATTTCGAAGCCCA GCTTTAGGTTAATACTGAAATACTGGGTTGAGGATTGATATGGATATAAA CTTTTTATCTAATGATAAATCAAACGTTCGAATTCAAAAAGGTGAAGGCC TACTTGAATCAAATATTTGCTTCCATAATAGCGAAACTTAAAGGTAATTT TTTAGACAAACTGAAAAATCTCTAGAGCTGGGTCATGGCGTAATGCTTAT AATAATATGTAGCTCCATTTTCTTCTTAGATATGATAGCGAAATGGCATT ACAAACACATTCCGTCATGAACTCGCCTCTTGCATCTTCTACCACATCAA GCAAAGAATTTAGCGAATTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000515XLOC_000515Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000870-exon-sc0000005-1575043694:1174585..1174656TCONS_00000870-exon-sc0000005-1575043694:1174585..1174656Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1174062..1174258TCONS_00000870-exon-sc0000005-1575043694:1174062..1174258Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1173622..1173696TCONS_00000870-exon-sc0000005-1575043694:1173622..1173696Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1172878..1173157TCONS_00000870-exon-sc0000005-1575043694:1172878..1173157Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1172207..1172420TCONS_00000870-exon-sc0000005-1575043694:1172207..1172420Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1171901..1172001TCONS_00000870-exon-sc0000005-1575043694:1171901..1172001Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1171428..1171659TCONS_00000870-exon-sc0000005-1575043694:1171428..1171659Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1170977..1171078TCONS_00000870-exon-sc0000005-1575043694:1170977..1171078Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1170413..1170722TCONS_00000870-exon-sc0000005-1575043694:1170413..1170722Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1164488..1164813TCONS_00000870-exon-sc0000005-1575043694:1164488..1164813Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1575043694:1163886..1163977TCONS_00000870-exon-sc0000005-1575043694:1163886..1163977Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1174585..1174656TCONS_00000870-exon-sc0000005-1510915933:1174585..1174656Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1174062..1174258TCONS_00000870-exon-sc0000005-1510915933:1174062..1174258Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1173622..1173696TCONS_00000870-exon-sc0000005-1510915933:1173622..1173696Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1172878..1173157TCONS_00000870-exon-sc0000005-1510915933:1172878..1173157Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1172207..1172420TCONS_00000870-exon-sc0000005-1510915933:1172207..1172420Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1171901..1172001TCONS_00000870-exon-sc0000005-1510915933:1171901..1172001Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1171428..1171659TCONS_00000870-exon-sc0000005-1510915933:1171428..1171659Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1170977..1171078TCONS_00000870-exon-sc0000005-1510915933:1170977..1171078Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1170413..1170722TCONS_00000870-exon-sc0000005-1510915933:1170413..1170722Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1164488..1164813TCONS_00000870-exon-sc0000005-1510915933:1164488..1164813Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1510915933:1163886..1163977TCONS_00000870-exon-sc0000005-1510915933:1163886..1163977Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1174585..1174656TCONS_00000870-exon-sc0000005-1491911889:1174585..1174656Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1174062..1174258TCONS_00000870-exon-sc0000005-1491911889:1174062..1174258Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1173622..1173696TCONS_00000870-exon-sc0000005-1491911889:1173622..1173696Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1172878..1173157TCONS_00000870-exon-sc0000005-1491911889:1172878..1173157Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1172207..1172420TCONS_00000870-exon-sc0000005-1491911889:1172207..1172420Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1171901..1172001TCONS_00000870-exon-sc0000005-1491911889:1171901..1172001Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1171428..1171659TCONS_00000870-exon-sc0000005-1491911889:1171428..1171659Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1170977..1171078TCONS_00000870-exon-sc0000005-1491911889:1170977..1171078Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1170413..1170722TCONS_00000870-exon-sc0000005-1491911889:1170413..1170722Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1164488..1164813TCONS_00000870-exon-sc0000005-1491911889:1164488..1164813Clytia hemisphaericaexon
TCONS_00000870-exon-sc0000005-1491911889:1163886..1163977TCONS_00000870-exon-sc0000005-1491911889:1163886..1163977Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:1163886..1174656 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.113376 0.00968875 0 0 0.000739623 0.00552356 0.00325063 0.00132871 0 0 1.022e-09 0.0168458 0.185099 0.0359895 0 0 0 0.0391956 0 0 0.0506611 0.551836 0 0 0 0
Blast
BLAST of TCONS_00000870 vs. Swiss-Prot (Human)
Match: FRYL (Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 2.154e-59
Identity = 187/578 (32.35%), Postives = 292/578 (50.52%), Query Frame = 3
Query:    3 HDE------KPREIPENTRQLKPVTLQGEGWGSVHSTQMVLNNLFYLTVXXXXXXX-XXXXXCWSALCARWEQNVTRILDYLIVMAGVCGTPVLM-HAKKVAIYIARAKTEKTIHVLTEELRLTEIVTNFWDRLDCPPYIKPLNKCITPPSTVSTGRKNEDYKKNITSPKKQPSLDSEYPEMRSESPSFPQQAPFNNRLSTE------RSSINSARNFAESVLESVKASQMASQIEQKKTETGSSELWMLNWVLKAHSMQGVGLPLPMPYELQYFAPITQAFP-LASPPAQLYRCNFSLMLLAEIVSDQR-DISWIFYXXXXXXXXXXXXDHAKPLVHENCKRLIINLLVVLVCDGDRSTIAKALM---DFH-----TVSSTA---LNRSASLKN------SNVKTSADGAVLESDELLKDEDRENLVAQAGGPELEERGLSI--DERAREVIEYLAKSDCKPLWAFEDITPRNGTVKSADQLESFLQIIVQLFDDALPNAL-LPGRWARESLHWATSCSSRHYAGRSFQIFRSLKIPLSWPMLSDILQRLVESVADSSDDVQGYFMEILMTFLAEVD 1628
            HDE      K RE+   +R+     L+GEGWGS  +T MVLNNL Y+T KY +  +  E+E  W+ L   W +N+  IL +LI + GV   P L+ + KKV +Y+ R KT + +  L  EL+LT+ V++    +D PPY                 R    YK     P       S    M + +   P   P    +          S +NS  N     LES  +S      E++K++  S  L+  NW LK       G PLP P     ++P+    P  +SP   L+RCN +++LL +++ D    + W  YL LLLH  F+G DH  P V+E+CKRL+++LL+V+  + +  T+A  L+   +F+     TV   A    N +A + +       +  T +  +   +   +   +    ++      L E  +S+  D + + ++E++      PLW  ED++ +N ++KSA+QL +FL+ +V +F  +    + L    +  +L  A SCSSRHYAGRSFQIFR+LK PL+   LSD+L RLVE+V D  +D QG+ +E+L+T  + +D
Sbjct: 1330 HDEDEDDSLKDRELMVTSRRW----LRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYY----------------RITSSYK----IPSVTSGTTSSSNTMVAPTDGNPDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSD--SMPLYS-NWRLKVME-HNQGEPLPFPPAGGCWSPLVDYVPETSSPGLPLHRCNIAVILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGPNSNIRTVASVLLRNKEFNEPRVLTVKQVAHLDYNFTAGINDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDISVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLEHHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLTATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAID 1879          
The following BLAST results are available for this feature:
BLAST of TCONS_00000870 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FRYL2.154e-5932.35Protein furry homolog-like OS=Homo sapiens GN=FRYL... [more]
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