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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000849 ID=TCONS_00000849|Name=TCONS_00000849|organism=Clytia hemisphaerica|type=transcript|length=450bp TACAGAAGACTATATTTTTACCATGGTCGGTGGTCAAGGATATGCGATAG AAACCTTTTTCAAGTACCACCCTGATGCAAGCTTTAGAAGAATGTATACA TTTATGTCTAAATACTTTGTCAAAAGTGAAATGGAAGGTGTTGAGAAAAT ATTAAACGGGACAATCCAAGCGATGATAACAGATACGAGCTCTTTACCAG TAATCAATCAGGACCTTGCCACAATGAGTGGATGTGATACCAAAGTGGAA CTGGTACCCGAATCATACATTGGAAAACATGGTCTAGGTTTTGGATTCCG TAAAAATTACACATTTGGTAAAATTATATCAGATACCCTACTCGATCTGC AAGATGCAGTTGATGGAGAAAGTTACCTGAAGAAAAAGTGGTTTCTTGAT TATTGTCATGACTACACACCAGTCGAGCAGTTTCATTGGACTTATTTTTC Run BLAST on NCBI protein sequence of TCONS_00000849-protein >TCONS_00000849-protein ID=TCONS_00000849-protein|Name=TCONS_00000849-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
TEDYIFTMVGGQGYAIETFFKYHPDASFRRMYTFMSKYFVKSEMEGVEKI LNGTIQAMITDTSSLPVINQDLATMSGCDTKVELVPESYIGKHGLGFGFR KNYTFGKIISDTLLDLQDAVDGESYLKKKWFLDYCHDYTPVEQFHWTYF Run BLAST on NCBI transcript from alignment at sc0000005:1032595..1034568- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000849 ID=TCONS_00000849|Name=TCONS_00000849|organism=Clytia hemisphaerica|type=transcript|length=1974bp|location=Sequence derived from alignment at sc0000005:1032595..1034568- (Clytia hemisphaerica) TACAGAAGACTATATTTTTACCATGGTCGGTGGTCAAGGATATGCGATAG
AAACCTTTTTCAAGTACCACCCTGATGCAAGCTTTAGAAGAATGTATACA
TTTATGTCTAAATACTTTGTCAAAAGTGAAATGGAAGGTGTTGAGAAAAT
ATTAAACGGGTAAGGTTCCGTCGAAGTTGACATTTACTGAATAAAGATTT
TCCTCTATTTATTTTATATGATAAGTTAACTGTATCTACGGCTTAGTGGT
GTAGTGGTTATCATCCTTGACTCTCGCCTGGAGGTCCGAGTTCGATACCC
ACCGTGTCTCTACGATTCACTTAGCTAGTGAATATACCTTCACCCGGGTC
AACCTATGTCATTTGAGGGAAATTGGGTACCATTACTCTGATTCAAGAGT
GTGGGTAGATTAGACAGACATTGTGACGTGTCGTGACACCCATAAGGTTC
GGTCTCGCGTGAACATCGCTCTCCCAGTGTCGTTCGAGTGTCATGGTATA
CACCATGGCTTAGCAGCTCGCGTCTGTCAAGTCGTAGTGTCTGTCAGTGC
CGTGATTCCTACTCCTTCGTGGGTAGGACCCATCCCAAATGCATTCGGCT
CATATCTATCTATCTATATGGCTTATAACTAGCCTGTTCTCTGTATAGAT
CTCACTTACCTACGAAAGCTTATCTAGACCATCAACATGAGGTGAACTTC
CCCTTCTCACAGACCCAGTATACCCTTCAGCCGGTGGGAATAAGAATAAC
GGACTGAAACTCGACGGGGATTGATATTCCAATACCATTGTTTTCAAGTC
AGAGAATTTAGTGAGAATGGAAAAAATAAATATTACACTCTTAAGATTTG
TTTATTTGGTTATTGTCAATNCTGGAGGTCCGAGTTCGATACCCACCGTG
TCTCTACGATTCACTTAGCTAGTGAATATACCTTCACCCGGGTCAACCTA
TGTCATTTGAGGGAAATTGGGTACCATTACTCTGATTCAAGAGTGTGGGT
AGATTAGACAGACATTGTGACGTGTCGTGACACTCATAAGGTTCGGTCTC
GCGTGAGCATCGCTCTCCCAGTGTCGTTCGAGTGTCATGGTATACACCAT
GGCTTAGCAGGCTCACGTCTGTCAAATCTTAGTGTTTGTCAGTGCCGTGA
TTCCTACTCCTTCCTGGGTAGGACCCATCCCCAATGCATTCGGCTCAAAT
CTATCTATCTATATGGCTTATAGCTAGCCTGTTCTCTGTATAGATCTCAC
TTACCTACAAAAGCTTATCTAGACCATCAACACGAGATGAACTTCCCCTT
CTCACAGACCCAGTATACCCTTCAGCCGGTGGGAATAAGAATAACGGAGT
GAAACTCGACGGGGATTGATATTCCAATACCATTGTTTTCAAATCAAAGA
ATTTAGTGAGAATGGAAAAATTAAATATTACACTCTTTAAGATTTGTTTA
TTTGGTTATTGTCAATTGGAACAAAAATTGAAGTATAATTTTCAACTAGG
GACGATATTTTGACCAAAGTTTCCGGTGGGAGTGGTCCTACATCGGCTCT
TTGAGACGGGGGTATATAGACGTAAAATTTAAATACTATCCACGGGTAGC
AAACCGTCAACTAGCTTGTAATAACCTAATCACGTGTTCATTTCATTCCG
GTATCGTTCATATCTACCTTTTTGCAATTTCAGGACAATCCAAGCGATGA
TAACAGATACGAGCTCTTTACCAGTAATCAATCAGGACCTTGCCACAATG
AGTGGATGTGATACCAAAGTGGAACTGGTACCCGAATCATACATTGGAAA
ACATGGTCTAGGTTTTGGATTCCGTAAAAATTACACATTTGGTAAAATTA
TATCAGATACCCTACTCGATCTGCAAGATGCAGTTGATGGAGAAAGTTAC
CTGAAGAAAAAGTGGTTTCTTGATTATTGTCATGACTACACACCAGTCGA
GCAGTTTCATTGGACTTATTTTTC Coding sequence (CDS) from alignment at sc0000005:1032595..1034568- >TCONS_00000849 ID=TCONS_00000849|Name=TCONS_00000849|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000005:1032595..1034568- (Clytia hemisphaerica) GACAATCCAAGCGATGATAACAGATACGAGCTCTTTACCAGTAATCAATC AGGACCTTGCCACAATGAGTGGATGTGATACCAAAGTGGAACTGGTACCC GAATCATACATTGGAAAACATGGTCTAGGTTTTGGATTCCGTAAAAATTA CACATTTGGTAAAATTATATCAGATACCCTACTCGATCTGCAAGATGCAG TTGATGGAGAAAGTTACCTGAAGAAAAAGTGGTTTCTTGATTATTGTCAT GACTACACACCAGTCGAGCAGTTTCATTGGACTTATTTTACAGAAGACTA TATTTTTACCATGGTCGGTGGTCAAGGATATGCGATAGAAACCTTTTTCA AGTACCACCCTGATGCAAGCTTTAGAAGAATGTATACATTTATGTCTAAA TACTTTGTCAAAAGTGAAATGGAAGGTGTTGAGAAAATATTAAACGGGAC AATCCAAGCGATGATAACAGATACGAGCTCTTTACCAGTAATCAATCAGG ACCTTGCCACAATGAGTGGATGTGATACCAAAGTGGAACTGGTACCCGAA TCATACATTGGAAAACATGGTCTAGGTTTTGGATTCCGTAAAAATTACAC ATTTGGTAAAATTATATCAGATACCCTACTCGATCTGCAAGATGCAGTTG ATGGAGAAAGTTACCTGAAGAAAAAGTGGTTTCTTGATTATTGTCATGAC TACACACCAGTCGAGCAGTTTCATTGGACTTATTTTACAGAAGACTATAT TTTTACCATGGTCGGTGGTCAAGGATATGCGATAGAAACCTTTTTCAAGT ACCACCCTGATGCAAGCTTTAGAAGAATGTATACATTTATGTCTAAATAC TTTGTCAAAAGTGAAATGGAAGGTGTTGAGAAAATATTAAACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00000849-exon-sc0000005-1575043694:1034410..1034568 | TCONS_00000849-exon-sc0000005-1575043694:1034410..1034568 | Clytia hemisphaerica | exon |
TCONS_00000849-exon-sc0000005-1575043694:1032595..1032885 | TCONS_00000849-exon-sc0000005-1575043694:1032595..1032885 | Clytia hemisphaerica | exon |
TCONS_00000849-exon-sc0000005-1510915933:1034410..1034568 | TCONS_00000849-exon-sc0000005-1510915933:1034410..1034568 | Clytia hemisphaerica | exon |
TCONS_00000849-exon-sc0000005-1510915933:1032595..1032885 | TCONS_00000849-exon-sc0000005-1510915933:1032595..1032885 | Clytia hemisphaerica | exon |
TCONS_00000849-exon-sc0000005-1491911889:1034410..1034568 | TCONS_00000849-exon-sc0000005-1491911889:1034410..1034568 | Clytia hemisphaerica | exon |
TCONS_00000849-exon-sc0000005-1491911889:1032595..1032885 | TCONS_00000849-exon-sc0000005-1491911889:1032595..1032885 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000005 | supercontig | sc0000005:1032595..1034568 - |
Blast
The following BLAST results are available for this feature:
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