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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000756 ID=TCONS_00000756|Name=TCONS_00000756|organism=Clytia hemisphaerica|type=transcript|length=2279bp
GAATAGAAAATGACGTAATCCTTCCTCAAATGAAGATGGTAGACTGACTG
TTATCGCGAAAAGAGTACACATTTTTCCTGTTGTATCAGGTTGTATACTG
CACTGCTTTCTGGCTGGCTTTCACCTTTATTTAGCTTCACCTTGTTTTAT
TCTTTTGGTATAATTTTTGATTGCAGTACTTGTTTCACTTGCCCTGCTCG
ATAAATAGAACACACGGGGCATGACACACACATCAACCCAAGTAAGTGCA
CACACAGTATAGTAACAACCATATCATCCAGAAGAAAACCCTGCCGACGA
TGACGCACCGGACTTTTTTTACCACCAGACAATCTCTACACTGGACTTAA
GGGAGTCGGATGCCCGGTGTTGGAGAAGGATATTCTTTCCCACTGGACGG
ACAATCATAATCAAGACTCTTGACGGACAATCAAGAGTACAAGACACCGA
CCGGACAtgcatgaccagtccggtgcgtccggtgtttcttaattttttgt
ttcataaatgtccggacttatagacctttttttaaagaggccaccctgtt
gaataattatgtagtccagcagaaaaacaatgataaaaccatgcataatt
attacaatatgcatgatacagtaattacgCATGGCTCTATCGTTGTTTtc
atggctggactacataattattcaacaggatgtcctctttgaaaaaaggt
ctattgcgtctggtgtagcgaaaggatactttttgccaccggacgaatac
accggacagtccggtgcgttggGCGGCAGGGTCCTTCCACCAGCTGCAAC
GTTGCTTGAAGGTACTGGTACATGTATGATGAACAGAACATAAAACAACA
AACTGACCGAAAACCACATCAATAATCAGCCAAAAATTGTCTGACCGTTA
AAATGAAGGAAGATTGTGCAGCAGTTCTTAAAAACTCCCATTTTTGCTAG
TCCAGGGTCTGGAGCTCAactattttttgcctttgataatctgatggtgg
aaaaaatagAGATAGATTTATATAGATTTTCTGACTACATTTTTGCAGCC
TTTCAGGGGTGCTTATTGAATGATAATGATTCCCCCCTGTTGTCAAATGC
ATCcactgaaatttctttttttcttctcagttcttctcattaaatttatt
atttaaaatttgattttaaacaCCTAAAAAAGGCTGCTAACATGATTGTC
CGATATTCTCGTTCTTGTTCTTCTCGTTCTTGTCAAATATATTTTCAGCA
TATGTAACTTCTTTTGTATTGGCAACTAAATGCAGTTTACACCACGAAGT
CGGGTaatttgcatcagtggaggctaacatgcatagccctcaaatgactg
accaatcaagatcaaagcagcaaaatttcaaaacaaatgaactacgcagc
tctgctcgcagctctactctaccatttttatttttatttaactttgtatt
ttaaggaaaaaattaCTACACTTGATCATTCAATGACAAATTGATAACCA
ATCAATTGATTCCTATAATCAATAGGACGACCATCAAAAAACTATTCTGT
TTGTAACAGGTGTTAGAAATGCATGCAGGCGGGCAGACAGTCTTTTGGAA
AGATTCCCCAGGGATTCCCTCTGCGCCAGGAACTGGAACGCTAgaacttt
ctgaaaaattgcTAGAACAGCCGAAAATCACTAGGAAACCATTCGCTTGC
CTGTtcttttttcacgattttttccATTATAACTACAGTTGACTTTCCAC
AAAGTCTATCCTCTTCAACTCAATTATTTCAATAAACTCAAACGATTTTT
TCCGGTCTCTTGAGGGGTTTTTTAGGCTATTTATGCCTCTCTATAACTGG
AATTGCTGTAACTCAAACGATTACTGATTTATTATCCCTGTTGGCATTCC
ATCACTGAACTGTATTATTATACTTCCCTACTTATATACTCAAAATctaa
tcatcaggtaggtccaatcagTGTCGGGCTTGTTTTTCACCAATTGGTTA
ACGATTGTGATCAATTGATCATACTATAGTCAATCATGTTCAATCAATCA
AGTGATAGGCAATCAAGCCTCCCTTAAAATCCTGATTAATGGATTTCAAT
TATTGGACTCAATCGATTGGTTATCGATTGGTCATCGATTGGAAAAGTTA
TTAATTGTATCGAGTGATAGAGTCTGGTCTAGGTAACAGCTGTGTTGTAA
AACATGGATTTAGAGGACATCATCATAAAAAATTTATGCTGTAGTAATTA
GTTTTTCAATAGACTTCTCCTAGGCAAAT Run BLAST on NCBI transcript from alignment at sc0000005:13730..16008- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000756 ID=TCONS_00000756|Name=TCONS_00000756|organism=Clytia hemisphaerica|type=transcript|length=2279bp|location=Sequence derived from alignment at sc0000005:13730..16008- (Clytia hemisphaerica)
GAATAGAAAATGACGTAATCCTTCCTCAAATGAAGATGGTAGACTGACTG
TTATCGCGAAAAGAGTACACATTTTTCCTGTTGTATCAGGTTGTATACTG
CACTGCTTTCTGGCTGGCTTTCACCTTTATTTAGCTTCACCTTGTTTTAT
TCTTTTGGTATAATTTTTGATTGCAGTACTTGTTTCACTTGCCCTGCTCG
ATAAATAGAACACACGGGGCATGACACACACATCAACCCAAGTAAGTGCA
CACACAGTATAGTAACAACCATATCATCCAGAAGAAAACCCTGCCGACGA
TGACGCACCGGACTTTTTTTACCACCAGACAATCTCTACACTGGACTTAA
GGGAGTCGGATGCCCGGTGTTGGAGAAGGATATTCTTTCCCACTGGACGG
ACAATCATAATCAAGACTCTTGACGGACAATCAAGAGTACAAGACACCGA
CCGGACATGCATGACCAGTCCGGTGCGTCCGGTGTTTCTTAATTTTTTGT
TTCATAAATGTCCGGACTTATAGACCTTTTTTTAAAGAGGCCACCCTGTT
GAATAATTATGTAGTCCAGCAGAAAAACAATGATAAAACCATGCATAATT
ATTACAATATGCATGATACAGTAATTACGCATGGCTCTATCGTTGTTTTC
ATGGCTGGACTACATAATTATTCAACAGGATGTCCTCTTTGAAAAAAGGT
CTATTGCGTCTGGTGTAGCGAAAGGATACTTTTTGCCACCGGACGAATAC
ACCGGACAGTCCGGTGCGTTGGGCGGCAGGGTCCTTCCACCAGCTGCAAC
GTTGCTTGAAGGTACTGGTACATGTATGATGAACAGAACATAAAACAACA
AACTGACCGAAAACCACATCAATAATCAGCCAAAAATTGTCTGACCGTTA
AAATGAAGGAAGATTGTGCAGCAGTTCTTAAAAACTCCCATTTTTGCTAG
TCCAGGGTCTGGAGCTCAACTATTTTTTGCCTTTGATAATCTGATGGTGG
AAAAAATAGAGATAGATTTATATAGATTTTCTGACTACATTTTTGCAGCC
TTTCAGGGGTGCTTATTGAATGATAATGATTCCCCCCTGTTGTCAAATGC
ATCCACTGAAATTTCTTTTTTTCTTCTCAGTTCTTCTCATTAAATTTATT
ATTTAAAATTTGATTTTAAACACCTAAAAAAGGCTGCTAACATGATTGTC
CGATATTCTCGTTCTTGTTCTTCTCGTTCTTGTCAAATATATTTTCAGCA
TATGTAACTTCTTTTGTATTGGCAACTAAATGCAGTTTACACCACGAAGT
CGGGTAATTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGACTG
ACCAATCAAGATCAAAGCAGCAAAATTTCAAAACAAATGAACTACGCAGC
TCTGCTCGCAGCTCTACTCTACCATTTTTATTTTTATTTAACTTTGTATT
TTAAGGAAAAAATTACTACACTTGATCATTCAATGACAAATTGATAACCA
ATCAATTGATTCCTATAATCAATAGGACGACCATCAAAAAACTATTCTGT
TTGTAACAGGTGTTAGAAATGCATGCAGGCGGGCAGACAGTCTTTTGGAA
AGATTCCCCAGGGATTCCCTCTGCGCCAGGAACTGGAACGCTAGAACTTT
CTGAAAAATTGCTAGAACAGCCGAAAATCACTAGGAAACCATTCGCTTGC
CTGTTCTTTTTTCACGATTTTTTCCATTATAACTACAGTTGACTTTCCAC
AAAGTCTATCCTCTTCAACTCAATTATTTCAATAAACTCAAACGATTTTT
TCCGGTCTCTTGAGGGGTTTTTTAGGCTATTTATGCCTCTCTATAACTGG
AATTGCTGTAACTCAAACGATTACTGATTTATTATCCCTGTTGGCATTCC
ATCACTGAACTGTATTATTATACTTCCCTACTTATATACTCAAAATCTAA
TCATCAGGTAGGTCCAATCAGTGTCGGGCTTGTTTTTCACCAATTGGTTA
ACGATTGTGATCAATTGATCATACTATAGTCAATCATGTTCAATCAATCA
AGTGATAGGCAATCAAGCCTCCCTTAAAATCCTGATTAATGGATTTCAAT
TATTGGACTCAATCGATTGGTTATCGATTGGTCATCGATTGGAAAAGTTA
TTAATTGTATCGAGTGATAGAGTCTGGTCTAGGTAACAGCTGTGTTGTAA
AACATGGATTTAGAGGACATCATCATAAAAAATTTATGCTGTAGTAATTA
GTTTTTCAATAGACTTCTCCTAGGCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000756-exon-sc0000005-1575043694:13730..16008 | TCONS_00000756-exon-sc0000005-1575043694:13730..16008 | Clytia hemisphaerica | exon |
| TCONS_00000756-exon-sc0000005-1510915933:13730..16008 | TCONS_00000756-exon-sc0000005-1510915933:13730..16008 | Clytia hemisphaerica | exon |
| TCONS_00000756-exon-sc0000005-1491911889:13730..16008 | TCONS_00000756-exon-sc0000005-1491911889:13730..16008 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:13730..16008 - |
Blast
The following BLAST results are available for this feature:
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