TCONS_00000716 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000716
Unique NameTCONS_00000716
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4417

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000716 ID=TCONS_00000716|Name=TCONS_00000716|organism=Clytia hemisphaerica|type=transcript|length=4417bp
TTTTTTGGTTTAGCACAAGAGTGAAACATTTTACGTGTCAAAAAGGTTGA
ACGTTGAGAAATCTATAAAGAGACACTACTTAACTTTAAAGatactaaaa
tttactttagaGATTTCGAAGAGTAGCAAGAGAAGATTAACAACTGCAAC
AACTGCACTGTGACGACAAACGCTTATGATTTCAATTCGAGTTTCTTGCA
AAACCAGATGGACATTGGTGGTCTGTCTGGCCATGTATGGACTACTGACC
GTAATTTATTTAGAATCAAGAGCAGCTACTACTAGAACCAATATACTTTC
TTCTTCGTTAAACGTGTTTGTTAAGAGCCGTGAAAGAACTATCTCTGATG
AAAAAGGTTGTCCAAAAAATTTTCTACCAAAGAAAACAGAATATCAGCCA
GATCAAAATACAACATGCAAACCGCATCTTCCGACATTGAGTTCCTGTAA
ATACGTAAATAGTTTTTTCGCGTATGATTTTGATAAATGGAACTGCGGCT
atgatgaaaaaatcaaaatatgccAATATGTTGGTGACTCTGATCAAACG
ATTAAGTGTACTCGCTCTCAATGTATTAGCAATATTATAGctcaaacttt
caatgataatacTGGACGTATTGAACCACTATCTAAACCATTTGAGTCAG
TTGATATGTTAGAAAAATACATAGAGTACCATAAAGAGCACCAAATTAAG
TTTCCGTTTATGTATCTGAGTTGTGAGGACGATCCTTCGAAGTCGCAATT
ATTTGTTTTGGATCCTCCAGTTAGAGAGGAAGCAAATGAACTAATACTTG
ATAATAAGCCAGTGAAATCAAAGGAAATCAATATCAATCTTATGTTTATG
GATTCAATCTCAAGAGCACATTTTTATCGGTCACTTAAAAGGACAATATC
AACTTTCCAATCCTTGAATGGGAGGTCTGATAGCAATGTAGAAGTTTTAG
ACTTTGAGCTGTTTCAATCGATTCACGGACATACAACGGAGAATATGCTT
GGATTATGGACTGGAAAGATCTTCCCTAAAGGTATGACGGATGATCAAAA
GGAGAGAGAATCAAGCAGGTTCCCTGAGATGTTAAAATGGTTGAAAATGA
AAGGTTACCAGAATTTATATCAAGAGGATATGTGTTGGGAAGGTATGTGG
GGACTGAATGCTGATCTTGGAGCTTTTCAAGATTGGAACCAGTTTCATGA
GGAATTGAAAAAGTCGTCTTCAATCGATGATTACGGTTTGACGTTTTCGA
CATGTAAAATTATCCAAATGTATGCGCCAGAAACTAACCACATCTTCAAT
ACTGATCAAAACATTTGCTTCAACGGGCTAGATATTGATGCTTATTTTCT
AAAGTATCTAtccagaaaattcaagatgacaaAGGAAAAACCTCTGTTCA
GTTACTCGAATCTTAATTTAGCCCATGATCCTTCAGGTAAGAGGATTCAA
GGCTTTGATGAGAATCTAAGTAATTTTGTTAAAGAAATTCCAAAACTGGA
TAACACACTAACCATCATTTTTGCTGATCATGGAAATACGTATAACGATT
ATGTTTATACAGAGCTGGAAGGTCGTTACGAGCAATTTCACCCGACTTTA
TTCGTGTTTGTTCCTGATAAGGTAAAGAAACAATTAGGTTATCAAGTTAT
GCAGAACATGAGACAGAATCAAAAAAGGTTGATAAATTTAATCGATGTTC
ATCATACTATAAAACATATCGCCGATAAGGAGCATTCACGTAAAGGATTC
TTAGATCTAATACCAGCTGAAAGGACCTGTGGAGATATTGAAATGGCAAT
GCCGAATTTATGTGTTTGCCAGGGCTGGGATTCACCAGTAGAAAATACAA
CAGATCTAATGCCATTTGTGGATTTTGCGATTGGGACATTGAATAATATT
ATTAGTGAAGCTTCCCCGACGGGGCGATGTAAAAAGATAGTCCcgaccaa
ttttcaaaatatattacagAGGAAAATAGAGGAGAAAGTTACAATGAGTT
TTGAAGTAACTGCTTCACCTGGCAAaggatcaaaaaattttgaagagaaA
ATGGGTTTTGAGATCAGTTATCAAAAGACTGAGAGCTCGGACACTCTTTC
AACTAAACTTGTTTCTAAAGACCGCATCTCAATATTCGGGAAATATCGGA
AGTGTAGTGATACAGATCCGAAATTTCGGTTTTNTGTTTCTAAAGACCGT
ATCTCAATATTCGGGAAATATCGGAAGTGTAGTGATACAGATCCGAAATT
TCGGTTTTGCGTGTGTGATTCAAATCCAAAAGCTTCGCCAAGGAAACTGA
GCCAATTTCAAGATTTAACACCGATAAGGACAAGCGATGTTTATAAATTA
TTTGGGCCGGGAGTTATTGACGAGGTTATGTACTTCTTGGTTCCTAATAA
ACTTGCACTATTGGTTAGAAAAACATTGGACCCTAAAACATCATTTTTAA
TTTCTGCAACGTTTGAAGCCATAAATTTGACTAATGATAGATACAAAGTT
GACGTtatctttcaaaatttatcaaatatgAAACACATATCAGATGGAGA
GTGCAAAGGGATCGTCACCGAACATAATATGCGCTATTTGTGCACTTTGA
TTCGAAACTGGTCAATTTATAAAGCTGACTTTTTCCATGACATCAAATTT
GAGAAAGTGGATTAAAATTCCTTTCGATTACATTTAATTAATAAGATAGG
AATGTTAAAATTTATAAACCTTTATGGGTAAGGCAAAATCAAATTTATCG
TATTTACAAGTTTTTCAGAATATGATCAAAAtacaatatttttacaagat
tataagattaaagaaaaatttcattctACCCAATTTAATGAATATTGTAC
CGTCAGAGATACTTTAGGGTGAAAAGGTGAAAATTAACACTTTATAACAC
AAAGATACTTCAGAcgtaaattttttgaaagaaaaaaatatatcccGGAG
AGAAAAACTCAAGGGGGGTTTAAATCATTTCTGTCAGATCTTTATGTCAT
TTATTGAaccattttttttaatgttcgtAATGTTCGTTCAAAGTTGACAG
TCCAAATAATCaacttaaaattgaaatttatcaTCCAATTTGCTAACTTC
TAAAATATTTCGAAACCATCCTCCAGAGGTAGTTGTCGCCAActcttttg
tttcaaaatttaagtcataaCCGTAAATAGATTTGTACTGCGGATGCTCA
TATGTAAAAACCAACTTTCCATTGTCCAAATCATAAAGTGCAAACACACC
TGCCTTATCTATTGACCAAATATCCGTGTTTATCACAGACAAAAAATGCT
TCCCATTTCCTTCGAATAATCGATATCGGTATTGATCAAAGGATTCGTTT
ATCGCTagtggaaattttttcaatctAATCATCCCATCAACAGTGGCATT
GAAAATTTCAACCTCTTTTGTGTGGAGCCAAACCACAAGAAATTGGGAGC
CTTTGCATTGTGCAAAGTATTCCCAATAATGAGGATACTCTTTTTCTTCA
TTCACAATTGGAAACATGAATAGTTTTTTccctttaaaatcaaaaccGCT
CATCAAACCTGAATCTCCAAATCCTTTGTATAATAGAGATTCACCGTTCA
TTGGCTTGTTATATTTAAGTTTTTGACAAACGATGTAAAACTGCTCAGCA
TTAGGATTTATGAACAATCTTTGTACACATTCTTCATATGCAACATGGTC
TGTTATTGATATTGTCTTAAAATGAGATATTTCTTTCTCATCAAAGcgaa
ataaatacaaaaaatgtTTCCCGTTTTTCTTATCTCGCAACAATGTGATA
TAGAAATCACCATCTTCTTGAGACTTATGGATATGATCACCTTCGTAAAC
CAAATTCGACTCAAGGTCAAAAGGTAACTTAACAATGTTACTTTCGCTCA
CATCTTCAGATTTTATTTCGCCTGAAGTCCCTAGATACTCTTTTAAAACA
TCGCTGCGTATTTCTAATGTACCAGGTTTCCCTGACTTAGGCTTTGTTAT
AGTGATTTGGAGCCAGCGAGTAGTTTTAGGATCATAACGTTGGCATCTAG
CTTTCAACTTGATCAAGCTAGCCTCCAGCTTTCGTGATTCTCTATTAAAG
CAGtaaactgaaatttcattatcagaaaaaatattttgatagaagCTAGT
GTAATAAGTCCCAGCTTTATCGAAACCTTGCACAGAAGCGTCATAGAGAA
GCACAGAGAGCACATCAATCTGcagttttttcttcttccagGGAAGTATA
CTTTGTTTACCCCATGTATCTTCATCCTCGATGCAACTATCTACGGAAGA
CGGTAGAAAAGATTGTCGAGTATCAGGCTTAGATTCCATACTTTCAAGAT
GATGCCAATAATCTTCAAGATGACTTTCCTAAATTGTTGTGTATATAGAT
ATTACCACTCTGTTTTC
Run BLAST on NCBI

protein sequence of TCONS_00000716-protein

>TCONS_00000716-protein ID=TCONS_00000716-protein|Name=TCONS_00000716-protein|organism=Clytia hemisphaerica|type=polypeptide|length=829bp
MISIRVSCKTRWTLVVCLAMYGLLTVIYLESRAATTRTNILSSSLNVFVK
SRERTISDEKGCPKNFLPKKTEYQPDQNTTCKPHLPTLSSCKYVNSFFAY
DFDKWNCGYDEKIKICQYVGDSDQTIKCTRSQCISNIIAQTFNDNTGRIE
PLSKPFESVDMLEKYIEYHKEHQIKFPFMYLSCEDDPSKSQLFVLDPPVR
EEANELILDNKPVKSKEININLMFMDSISRAHFYRSLKRTISTFQSLNGR
SDSNVEVLDFELFQSIHGHTTENMLGLWTGKIFPKGMTDDQKERESSRFP
EMLKWLKMKGYQNLYQEDMCWEGMWGLNADLGAFQDWNQFHEELKKSSSI
DDYGLTFSTCKIIQMYAPETNHIFNTDQNICFNGLDIDAYFLKYLSRKFK
MTKEKPLFSYSNLNLAHDPSGKRIQGFDENLSNFVKEIPKLDNTLTIIFA
DHGNTYNDYVYTELEGRYEQFHPTLFVFVPDKVKKQLGYQVMQNMRQNQK
RLINLIDVHHTIKHIADKEHSRKGFLDLIPAERTCGDIEMAMPNLCVCQG
WDSPVENTTDLMPFVDFAIGTLNNIISEASPTGRCKKIVPTNFQNILQRK
IEEKVTMSFEVTASPGKGSKNFEEKMGFEISYQKTESSDTLSTKLVSKDR
ISIFGKYRKCSDTDPKFRFXVSKDRISIFGKYRKCSDTDPKFRFCVCDSN
PKASPRKLSQFQDLTPIRTSDVYKLFGPGVIDEVMYFLVPNKLALLVRKT
LDPKTSFLISATFEAINLTNDRYKVDVIFQNLSNMKHISDGECKGIVTEH
NMRYLCTLIRNWSIYKADFFHDIKFEKVD
Run BLAST on NCBI

transcript from alignment at sc0000005:864722..869528+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000716 ID=TCONS_00000716|Name=TCONS_00000716|organism=Clytia hemisphaerica|type=transcript|length=4807bp|location=Sequence derived from alignment at sc0000005:864722..869528+ (Clytia hemisphaerica)
TTTTTTGGTTTAGCACAAGAGTGAAACATTTTACGTGTCAAAAAGGTTGA
ACGTTGAGAAATCTATAAAGAGACACTACTTAACTTTAAAGatactaaaa
tttactttagaGATTTCGAAGAGTAGCAAGAGAAGATTAACAACTGCAAC
AACTGCACTGTGACGACAAACGCTTATGATTTCAATTCGAGTTTCTTGCA
AAACCAGATGGACATTGGTGGTCTGTCTGGCCATGTATGGACTACTGACC
GTAATTTATTTAGAATCAAGAGCAGCTACTACTAGAACCAATATACTTTC
TTCTTCGTTAAACGTGTTTGTTAAGAGCCGTGAAAGAACTATCTCTGATG
AAAAAGGTTGTCCAAAAAATTTTCTACCAAAGAAAACAGAATATCAGCCA
GATCAAAATACAACATGCAAACCGCATCTTCCGACATTGAGTTCCTGTAA
ATACGTAAATAGTTTTTTCGCGTATGATTTTGATAAATGGAACTGCGGCT
atgatgaaaaaatcaaaatatgccAATATGTTGGTGACTCTGATCAAACG
ATTAAGTGTACTCGCTCTCAATGTATTAGCAATATTATAGctcaaacttt
caatgataatacTGGACGTATTGAACCACTATCTAAACCATTTGAGTCAG
TTGATATGTTAGAAAAATACATAGAGTACCATAAAGAGCACCAAATTAAG
TTTCCGTTTATGTATCTGAGTTGTGAGGACGATCCTTCGAAGTCGCAATT
ATTTGTTTTGGATCCTCCAGTTAGAGAGGAAGCAAATGAACTAATACTTG
ATAATAAGCCAGTGAAATCAAAGGAAATCAATATCAATCTTATGTTTATG
GATTCAATCTCAAGAGCACATTTTTATCGGTCACTTAAAAGGACAATATC
AACTTTCCAATCCTTGAATGGGAGGTCTGATAGCAATGTAGAAGTTTTAG
ACTTTGAGCTGTTTCAATCGATTCACGGACATACAACGGAGAATATGCTT
GGATTATGGACTGGAAAGATCTTCCCTAAAGGTATGACGGATGATCAAAA
GGAGAGAGAATCAAGCAGGTTCCCTGAGATGTTAAAATGGTTGAAAATGA
AAGGTTACCAGAATTTATATCAAGAGGATATGTGTTGGGAAGGTATGTGG
GGACTGAATGCTGATCTTGGAGCTTTTCAAGATTGGAACCAGTTTCATGA
GGAATTGAAAAAGTCGTCTTCAATCGATGATTACGGTATGTCGGGGTTTG
AGAcaagttttcattttatttaatCTTTTGAATAAAGTTCCTTGTTTGAA
TATACAGCTGTGGTGCTCTTTGGCGTGTGAGGAATTTTGATTAGGCATTC
TTAAAAACAGCACACTTCAGATACCAATATAAAGAAAATAGTTGTAATTG
GGGtcttttttgactaaaataatttgaaatgacTTTTCTGATGTCCCAAG
TCTCGTTCTTTGTGATACACAGCTGTTATCAATAAGAAAATGGCACTTTG
AAAAGAGGCCTTAATCTTTGTGAACCTTCTTCTAATTTTCATTGACTGTA
CACCGTAAGAGGGTATTTCGAGGTATATATTTAAACTCTTAATGTAATAA
GTTACTCGTTTATGTTTTCTTTCAGGTTTGACGTTTTCGACATGTAAAAT
TATCCAAATGTATGCGCCAGAAACTAACCACATCTTCAATACTGATCAAA
ACATTTGCTTCAACGGGCTAGATATTGATGCTTATTTTCTAAAGTATCTA
tccagaaaattcaagatgacaaAGGAAAAACCTCTGTTCAGTTACTCGAA
TCTTAATTTAGCCCATGATCCTTCAGGTAAGAGGATTCAAGGCTTTGATG
AGAATCTAAGTAATTTTGTTAAAGAAATTCCAAAACTGGATAACACACTA
ACCATCATTTTTGCTGATCATGGAAATACGTATAACGATTATGTTTATAC
AGAGCTGGAAGGTCGTTACGAGCAATTTCACCCGACTTTATTCGTGTTTG
TTCCTGATAAGGTAAAGAAACAATTAGGTTATCAAGTTATGCAGAACATG
AGACAGAATCAAAAAAGGTTGATAAATTTAATCGATGTTCATCATACTAT
AAAACATATCGCCGATAAGGAGCATTCACGTAAAGGATTCTTAGATCTAA
TACCAGCTGAAAGGACCTGTGGAGATATTGAAATGGCAATGCCGAATTTA
TGTGTTTGCCAGGGCTGGGATTCACCAGTAGAAAATACAACAGATCTAAT
GCCATTTGTGGATTTTGCGATTGGGACATTGAATAATATTATTAGTGAAG
CTTCCCCGACGGGGCGATGTAAAAAGATAGTCCcgaccaattttcaaaat
atattacagAGGAAAATAGAGGAGAAAGTTACAATGAGTTTTGAAGTAAC
TGCTTCACCTGGCAAaggatcaaaaaattttgaagagaaAATGGGTTTTG
AGATCAGTTATCAAAAGACTGAGAGCTCGGACACTCTTTCAACTAAACTT
GTTTCTAAAGACCGCATCTCAATATTCGGGAAATATCGGAAGTGTAGTGA
TACAGATCCGAAATTTCGGTTTTNTGTTTCTAAAGACCGTATCTCAATAT
TCGGGAAATATCGGAAGTGTAGTGATACAGATCCGAAATTTCGGTTTTGC
GTGTGTGATTCAAATCCAAAAGCTTCGCCAAGGAAACTGAGCCAATTTCA
AGATTTAACACCGATAAGGACAAGCGATGTTTATAAATTATTTGGGCCGG
GAGTTATTGACGAGGTTATGTACTTCTTGGTTCCTAATAAACTTGCACTA
TTGGTTAGAAAAACATTGGACCCTAAAACATCATTTTTAATTTCTGCAAC
GTTTGAAGCCATAAATTTGACTAATGATAGATACAAAGTTGACGTtatct
ttcaaaatttatcaaatatgAAACACATATCAGATGGAGAGTGCAAAGGG
ATCGTCACCGAACATAATATGCGCTATTTGTGCACTTTGATTCGAAACTG
GTCAATTTATAAAGCTGACTTTTTCCATGACATCAAATTTGAGAAAGTGG
ATTAAAATTCCTTTCGATTACATTTAATTAATAAGATAGGAATGTTAAAA
TTTATAAACCTTTATGGGTAAGGCAAAATCAAATTTATCGTATTTACAAG
TTTTTCAGAATATGATCAAAAtacaatatttttacaagattataagatta
aagaaaaatttcattctACCCAATTTAATGAATATTGTACCGTCAGAGAT
ACTTTAGGGTGAAAAGGTGAAAATTAACACTTTATAACACAAAGATACTT
CAGAcgtaaattttttgaaagaaaaaaatatatcccGGAGAGAAAAACTC
AAGGGGGGTTTAAATCATTTCTGTCAGATCTTTATGTCATTTATTGAacc
attttttttaatgttcgtAATGTTCGTTCAAAGTTGACAGTCCAAATAAT
CaacttaaaattgaaatttatcaTCCAATTTGCTAACTTCTAAAATATTT
CGAAACCATCCTCCAGAGGTAGTTGTCGCCAActcttttgtttcaaaatt
taagtcataaCCGTAAATAGATTTGTACTGCGGATGCTCATATGTAAAAA
CCAACTTTCCATTGTCCAAATCATAAAGTGCAAACACACCTGCCTTATCT
ATTGACCAAATATCCGTGTTTATCACAGACAAAAAATGCTTCCCATTTCC
TTCGAATAATCGATATCGGTATTGATCAAAGGATTCGTTTATCGCTagtg
gaaattttttcaatctAATCATCCCATCAACAGTGGCATTGAAAATTTCA
ACCTCTTTTGTGTGGAGCCAAACCACAAGAAATTGGGAGCCTTTGCATTG
TGCAAAGTATTCCCAATAATGAGGATACTCTTTTTCTTCATTCACAATTG
GAAACATGAATAGTTTTTTccctttaaaatcaaaaccGCTCATCAAACCT
GAATCTCCAAATCCTTTGTATAATAGAGATTCACCGTTCATTGGCTTGTT
ATATTTAAGTTTTTGACAAACGATGTAAAACTGCTCAGCATTAGGATTTA
TGAACAATCTTTGTACACATTCTTCATATGCAACATGGTCTGTTATTGAT
ATTGTCTTAAAATGAGATATTTCTTTCTCATCAAAGcgaaataaatacaa
aaaatgtTTCCCGTTTTTCTTATCTCGCAACAATGTGATATAGAAATCAC
CATCTTCTTGAGACTTATGGATATGATCACCTTCGTAAACCAAATTCGAC
TCAAGGTCAAAAGGTAACTTAACAATGTTACTTTCGCTCACATCTTCAGA
TTTTATTTCGCCTGAAGTCCCTAGATACTCTTTTAAAACATCGCTGCGTA
TTTCTAATGTACCAGGTTTCCCTGACTTAGGCTTTGTTATAGTGATTTGG
AGCCAGCGAGTAGTTTTAGGATCATAACGTTGGCATCTAGCTTTCAACTT
GATCAAGCTAGCCTCCAGCTTTCGTGATTCTCTATTAAAGCAGtaaactg
aaatttcattatcagaaaaaatattttgatagaagCTAGTGTAATAAGTC
CCAGCTTTATCGAAACCTTGCACAGAAGCGTCATAGAGAAGCACAGAGAG
CACATCAATCTGcagttttttcttcttccagGGAAGTATACTTTGTTTAC
CCCATGTATCTTCATCCTCGATGCAACTATCTACGGAAGACGGTAGAAAA
GATTGTCGAGTATCAGGCTTAGATTCCATACTTTCAAGATGATGCCAATA
ATCTTCAAGATGACTTTCCTAAATTGTTGTGTATATAGATATTACCACTC
TGTTTTC

Coding sequence (CDS) from alignment at sc0000005:864722..869528+

>TCONS_00000716 ID=TCONS_00000716|Name=TCONS_00000716|organism=Clytia hemisphaerica|type=CDS|length=4980bp|location=Sequence derived from alignment at sc0000005:864722..869528+ (Clytia hemisphaerica)
ATGATTTCAATTCGAGTTTCTTGCAAAACCAGATGGACATTGGTGGTCTG
TCTGGCCATGTATGGACTACTGACCGTAATTTATTTAGAATCAAGAGCAG
CTACTACTAGAACCAATATACTTTCTTCTTCGTTAAACGTGTTTGTTAAG
AGCCGTGAAAGAACTATCTCTGATGAAAAAGGTTGTCCAAAAAATTTTCT
ACCAAAGAAAACAGAATATCAGCCAGATCAAAATACAACATGCAAACCGC
ATCTTCCGACATTGAGTTCCTGTAAATACGTAAATAGTTTTTTCGCGTAT
GATTTTGATAAATGGAACTGCGGCTatgatgaaaaaatcaaaatatgccA
ATATGTTGGTGACTCTGATCAAACGATTAAGTGTACTCGCTCTCAATGTA
TTAGCAATATTATAGctcaaactttcaatgataatacTGGACGTATTGAA
CCACTATCTAAACCATTTGAGTCAGTTGATATGTTAGAAAAATACATAGA
GTACCATAAAGAGCACCAAATTAAGTTTCCGTTTATGTATCTGAGTTGTG
AGGACGATCCTTCGAAGTCGCAATTATTTGTTTTGGATCCTCCAGTTAGA
GAGGAAGCAAATGAACTAATACTTGATAATAAGCCAGTGAAATCAAAGGA
AATCAATATCAATCTTATGTTTATGGATTCAATCTCAAGAGCACATTTTT
ATCGGTCACTTAAAAGGACAATATCAACTTTCCAATCCTTGAATGGGAGG
TCTGATAGCAATGTAGAAGTTTTAGACTTTGAGCTGTTTCAATCGATTCA
CGGACATACAACGGAGAATATGCTTGGATTATGGACTGGAAAGATCTTCC
CTAAAGGTATGACGGATGATCAAAAGGAGAGAGAATCAAGCAGGTTCCCT
GAGATGTTAAAATGGTTGAAAATGAAAGGTTACCAGAATTTATATCAAGA
GGATATGTGTTGGGAAGGTATGTGGGGACTGAATGCTGATCTTGGAGCTT
TTCAAGATTGGAACCAGTTTCATGAGGAATTGAAAAAGTCGTCTTCAATC
GATGATTACGGTTTGACGTTTTCGACATGTAAAATTATCCAAATGTATGC
GCCAGAAACTAACCACATCTTCAATACTGATCAAAACATTTGCTTCAACG
GGCTAGATATTGATGCTTATTTTCTAAAGTATCTAtccagaaaattcaag
atgacaaAGGAAAAACCTCTGTTCAGTTACTCGAATCTTAATTTAGCCCA
TGATCCTTCAGGTAAGAGGATTCAAGGCTTTGATGAGAATCTAAGTAATT
TTGTTAAAGAAATTCCAAAACTGGATAACACACTAACCATCATTTTTGCT
GATCATGGAAATACGTATAACGATTATGTTTATACAGAGCTGGAAGGTCG
TTACGAGCAATTTCACCCGACTTTATTCGTGTTTGTTCCTGATAAGGTAA
AGAAACAATTAGGTTATCAAGTTATGCAGAACATGAGACAGAATCAAAAA
AGGTTGATAAATTTAATCGATGTTCATCATACTATAAAACATATCGCCGA
TAAGGAGCATTCACGTAAAGGATTCTTAGATCTAATACCAGCTGAAAGGA
CCTGTGGAGATATTGAAATGGCAATGCCGAATTTATGTGTTTGCCAGGGC
TGGGATTCACCAGTAGAAAATACAACAGATCTAATGCCATTTGTGGATTT
TGCGATTGGGACATTGAATAATATTATTAGTGAAGCTTCCCCGACGGGGC
GATGTAAAAAGATAGTCCcgaccaattttcaaaatatattacagAGGAAA
ATAGAGGAGAAAGTTACAATGAGTTTTGAAGTAACTGCTTCACCTGGCAA
aggatcaaaaaattttgaagagaaAATGGGTTTTGAGATCAGTTATCAAA
AGACTGAGAGCTCGGACACTCTTTCAACTAAACTTGTTTCTAAAGACCGC
ATCTCAATATTCGGGAAATATCGGAAGTGTAGTGATACAGATCCGAAATT
TCGGTTTTNTGTTTCTAAAGACCGTATCTCAATATTCGGGAAATATCGGA
AGTGTAGTGATACAGATCCGAAATTTCGGTTTTGCGTGTGTGATTCAAAT
CCAAAAGCTTCGCCAAGGAAACTGAGCCAATTTCAAGATTTAACACCGAT
AAGGACAAGCGATGTTTATAAATTATTTGGGCCGGGAGTTATTGACGAGG
TTATGTACTTCTTGGTTCCTAATAAACTTGCACTATTGGTTAGAAAAACA
TTGGACCCTAAAACATCATTTTTAATTTCTGCAACGTTTGAAGCCATAAA
TTTGACTAATGATAGATACAAAGTTGACGTtatctttcaaaatttatcaa
atatgAAACACATATCAGATGGAGAGTGCAAAGGGATCGTCACCGAACAT
AATATGCGCTATTTGTGCACTTTGATTCGAAACTGGTCAATTTATAAAGC
TGACTTTTTCCATGACATCAAATTTGAGAAAGTGGATTAAATGATTTCAA
TTCGAGTTTCTTGCAAAACCAGATGGACATTGGTGGTCTGTCTGGCCATG
TATGGACTACTGACCGTAATTTATTTAGAATCAAGAGCAGCTACTACTAG
AACCAATATACTTTCTTCTTCGTTAAACGTGTTTGTTAAGAGCCGTGAAA
GAACTATCTCTGATGAAAAAGGTTGTCCAAAAAATTTTCTACCAAAGAAA
ACAGAATATCAGCCAGATCAAAATACAACATGCAAACCGCATCTTCCGAC
ATTGAGTTCCTGTAAATACGTAAATAGTTTTTTCGCGTATGATTTTGATA
AATGGAACTGCGGCTatgatgaaaaaatcaaaatatgccAATATGTTGGT
GACTCTGATCAAACGATTAAGTGTACTCGCTCTCAATGTATTAGCAATAT
TATAGctcaaactttcaatgataatacTGGACGTATTGAACCACTATCTA
AACCATTTGAGTCAGTTGATATGTTAGAAAAATACATAGAGTACCATAAA
GAGCACCAAATTAAGTTTCCGTTTATGTATCTGAGTTGTGAGGACGATCC
TTCGAAGTCGCAATTATTTGTTTTGGATCCTCCAGTTAGAGAGGAAGCAA
ATGAACTAATACTTGATAATAAGCCAGTGAAATCAAAGGAAATCAATATC
AATCTTATGTTTATGGATTCAATCTCAAGAGCACATTTTTATCGGTCACT
TAAAAGGACAATATCAACTTTCCAATCCTTGAATGGGAGGTCTGATAGCA
ATGTAGAAGTTTTAGACTTTGAGCTGTTTCAATCGATTCACGGACATACA
ACGGAGAATATGCTTGGATTATGGACTGGAAAGATCTTCCCTAAAGGTAT
GACGGATGATCAAAAGGAGAGAGAATCAAGCAGGTTCCCTGAGATGTTAA
AATGGTTGAAAATGAAAGGTTACCAGAATTTATATCAAGAGGATATGTGT
TGGGAAGGTATGTGGGGACTGAATGCTGATCTTGGAGCTTTTCAAGATTG
GAACCAGTTTCATGAGGAATTGAAAAAGTCGTCTTCAATCGATGATTACG
GTTTGACGTTTTCGACATGTAAAATTATCCAAATGTATGCGCCAGAAACT
AACCACATCTTCAATACTGATCAAAACATTTGCTTCAACGGGCTAGATAT
TGATGCTTATTTTCTAAAGTATCTAtccagaaaattcaagatgacaaAGG
AAAAACCTCTGTTCAGTTACTCGAATCTTAATTTAGCCCATGATCCTTCA
GGTAAGAGGATTCAAGGCTTTGATGAGAATCTAAGTAATTTTGTTAAAGA
AATTCCAAAACTGGATAACACACTAACCATCATTTTTGCTGATCATGGAA
ATACGTATAACGATTATGTTTATACAGAGCTGGAAGGTCGTTACGAGCAA
TTTCACCCGACTTTATTCGTGTTTGTTCCTGATAAGGTAAAGAAACAATT
AGGTTATCAAGTTATGCAGAACATGAGACAGAATCAAAAAAGGTTGATAA
ATTTAATCGATGTTCATCATACTATAAAACATATCGCCGATAAGGAGCAT
TCACGTAAAGGATTCTTAGATCTAATACCAGCTGAAAGGACCTGTGGAGA
TATTGAAATGGCAATGCCGAATTTATGTGTTTGCCAGGGCTGGGATTCAC
CAGTAGAAAATACAACAGATCTAATGCCATTTGTGGATTTTGCGATTGGG
ACATTGAATAATATTATTAGTGAAGCTTCCCCGACGGGGCGATGTAAAAA
GATAGTCCcgaccaattttcaaaatatattacagAGGAAAATAGAGGAGA
AAGTTACAATGAGTTTTGAAGTAACTGCTTCACCTGGCAAaggatcaaaa
aattttgaagagaaAATGGGTTTTGAGATCAGTTATCAAAAGACTGAGAG
CTCGGACACTCTTTCAACTAAACTTGTTTCTAAAGACCGCATCTCAATAT
TCGGGAAATATCGGAAGTGTAGTGATACAGATCCGAAATTTCGGTTTTNT
GTTTCTAAAGACCGTATCTCAATATTCGGGAAATATCGGAAGTGTAGTGA
TACAGATCCGAAATTTCGGTTTTGCGTGTGTGATTCAAATCCAAAAGCTT
CGCCAAGGAAACTGAGCCAATTTCAAGATTTAACACCGATAAGGACAAGC
GATGTTTATAAATTATTTGGGCCGGGAGTTATTGACGAGGTTATGTACTT
CTTGGTTCCTAATAAACTTGCACTATTGGTTAGAAAAACATTGGACCCTA
AAACATCATTTTTAATTTCTGCAACGTTTGAAGCCATAAATTTGACTAAT
GATAGATACAAAGTTGACGTtatctttcaaaatttatcaaatatgAAACA
CATATCAGATGGAGAGTGCAAAGGGATCGTCACCGAACATAATATGCGCT
ATTTGTGCACTTTGATTCGAAACTGGTCAATTTATAAAGCTGACTTTTTC
CATGACATCAAATTTGAGAAAGTGGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000450XLOC_000450Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000716-proteinTCONS_00000716-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000716-exon-sc0000005-1491911889:864722..865956TCONS_00000716-exon-sc0000005-1491911889:864722..865956Clytia hemisphaericaexon
TCONS_00000716-exon-sc0000005-1510915933:864722..865956TCONS_00000716-exon-sc0000005-1510915933:864722..865956Clytia hemisphaericaexon
TCONS_00000716-exon-sc0000005-1575043694:864722..865956TCONS_00000716-exon-sc0000005-1575043694:864722..865956Clytia hemisphaericaexon
TCONS_00000716-exon-sc0000005-1491911889:866347..869528TCONS_00000716-exon-sc0000005-1491911889:866347..869528Clytia hemisphaericaexon
TCONS_00000716-exon-sc0000005-1510915933:866347..869528TCONS_00000716-exon-sc0000005-1510915933:866347..869528Clytia hemisphaericaexon
TCONS_00000716-exon-sc0000005-1575043694:866347..869528TCONS_00000716-exon-sc0000005-1575043694:866347..869528Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:864722..869528 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00843102	0.00822158	0.0190921	0	0.318352	0.26055	6.09175	5.74361	1.90405	1.50485	1.30689	0.993858	1.76627	1.3335	0.162772	0.205505	2.15824	2.38728	3.28919	3.70449	1.88302	1.94429	0.715346	1.01068	1.3397	1.6319	0.439303	0.0123378	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017849Alkaline_Pase-like_a/b/a
IPR004245DUF229
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000716 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top