TCONS_00000692 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000692
Unique NameTCONS_00000692
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1080

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000692 ID=TCONS_00000692|Name=TCONS_00000692|organism=Clytia hemisphaerica|type=transcript|length=1080bp
CCATCTTGAATTTAAAGTGTTAagttttcaattaaaacttaTGACATAgt
tcaaagaaattttaattAGATTTCCAATcctaaaaaaaagttaattccTC
ACTCTTATAATCGCAAAAAACATTCAACGAAGACTGTAAGCAGAAATTAA
GTAATGTTCTCTGCGAGAATACAAATGGACATGCATAAAGTAATAATTTG
TAGCTTAATGGTTTCCCTTATCATTAATGGGAATCTTGCACAAGAAATGC
AACTTAACTCTCATTTTCGcctggaaaaagaaaattacatcATCAAAAAT
GGCTCTCATATACCATCAGAAGAATTTGTTATCAAAGGCTCGGAAATTGA
ATGCTTGTTAAAATGTCAACTCAATTATTTGGCGTGCTTCACTCTTGAAA
TTCTGAAGATGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATGTCGAT
TTCATGAAATTGAGTTATGAATCAAAAGAGGGGTCAATGGTTTATTCTAC
TACTGCACGAAGTTGTTTAGAATGGTTGGAAAGAGGCTTCACATTGGATG
GTGTGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACTGCGAC
ATGACTGGAGGAGGGTGGACAACGATTCAACGCCGAGTAAACGGTGACAT
TGATTTCAATCGAGGTTGGCAATCATACAAAGAAGGCTTTGGCGATGTCA
ATGGTGATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTGTGTTG
TTGAATAACACTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGAGATCG
AAGATTTATCATTGCAAAGGGATTCTACATCAAAGACGAACAAAAGAAAT
ACAAATTGCATTCTGGGACAATGATCAATGATGAATGGGATATCGGACGT
GATTGGACATTTCAAGATGGTGAAATGTTCACAACACAAGATGATGATAA
TGATAAAAAAGGTGGTGGCAATTGTGCACAAGAATTTGCTTGTGCTTGGT
GGTATGTGCGCTGTTTCGCAATGAATGCTAACAGAGCACcagcaaaacaa
caacaaacaacatACGCAGGCGGTATCAGC
Run BLAST on NCBI

protein sequence of TCONS_00000692-protein

>TCONS_00000692-protein ID=TCONS_00000692-protein|Name=TCONS_00000692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
MFSARIQMDMHKVIICSLMVSLIINGNLAQEMQLNSHFRLEKENYIIKNG
SHIPSEEFVIKGSEIECLLKCQLNYLACFTLEILKMGLTSWLCRFYNVDF
MKLSYESKEGSMVYSTTARSCLEWLERGFTLDGVYKILTVGEEKEVYCDM
TGGGWTTIQRRVNGDIDFNRGWQSYKEGFGDVNGDFWIGLETIREMSVLL
NNTLIRIQGESFNGDRRFIIAKGFYIKDEQKKYKLHSGTMINDEWDIGRD
WTFQDGEMFTTQDDDNDKKGGGNCAQEFACAWWYVRCFAMNANRAPAKQQ
QTTYAGGIS
Run BLAST on NCBI

transcript from alignment at sc0000005:196585..204218+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000692 ID=TCONS_00000692|Name=TCONS_00000692|organism=Clytia hemisphaerica|type=transcript|length=7634bp|location=Sequence derived from alignment at sc0000005:196585..204218+ (Clytia hemisphaerica)
CCATCTTGAATTTAAAGTGTTAagttttcaattaaaacttaTGACATAgt
tcaaagaaattttaattAGATTTCCAATcctaaaaaaaagttaattccTC
ACTCTTATAATCGCAAAAAACATTCAACGAAGACTGTAAGCAGAAATTAA
GTAATGTTCTCTGCGAGAATACAAATGGACATGCATAAAGTAATAATTTG
TAGCTTAATGGTTTCCCTTATCATTAATGGGAATCTTGCACAAGAAATGC
AACTTAACTCTCATTTTCGcctggaaaaagaaaattacatcATCAAAAAT
GGCTCTCATATACCATCAGAAGAATTTGTTATCAAAGGCTCGGAAATTGA
ATGCTTGTTAAAATGTCAACTCAATTATTTGGCGTGCTTCACTCTTGAAA
TTCTGAAGATGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATGTCGAT
TTCATGAAATTGAGTTATGAATCAAAAGAGGGGTCAATGGTTTATTCTAC
TACTGCACGAAGTTGTTTAGAATGGTTGGAAAGAGGCTTCACATTGGATG
GTGTGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACTGCGAC
ATGACTGGTAAATAAAGTTCGATTCCATTTATCTGAGGTCATAAAAACAT
CATGTTATTCTCACAAACTTTTACCAAATTAGCCTAGGCTTCAAAACCGA
AATTTAACATTGATCAGAACATTAGATCGCTAAACGACGGTTACTATANA
CGtcatactttaggcgtagaaactttcgcgagcagaaactttcgcgattt
tcgcgaattttggcccttttcgcgaaagtaaatgtctttaaaaattctag
gaagtgccattcgcgaaagtttatgctcgcgaaaaattcttgccaaaata
gaaaatctgtaaaacttcaaactttgaataaaatgtaacttttatggcac
tttttagcctgctaaaagactaacaagtcaaaggacaaatgtttcaagcc
aacccaagaagtatttgtgtctctaagccattttttcatgtgaaaattct
caattttacgtcttgattcgcgaaagtttatgctcgcgaaaaatattttt
ccgttaaattctcgaaagtaaatgtcgtgaatttcgcgatttttcgtcat
cgcgaaagtttctgctcgcgaaagtttgtacgcccaAAGTAGCCAttccg
gcgtcgtccgagacgactctgCTCCAAGTAAATTTTTCTTGCTTCGCCTG
CTTAAAATGTGCTGTCCAGCTCCTTGATAATTTGTAAAACTCTGATGTCA
AAATATAATGATGATATTTTACAGGCTATGAAAAAACATTCATTTGAGAT
TTGTTCTTTTCtaaatgaatgaattttttttgaatttgaaaagaattcga
atgtcattattCTTAATAGGGTCGGCGGGAGGGTCGTTAAAAATTACATT
CGAaaagatataaaataaaaaagagaaaaaatgagagaaaaagaGTGGAC
AAGCAAAGGCAGAAACTAAATTTGCTTGATGTAGATGGGGCTTTAACTTC
AActcaaagtcatcttttaaaaagaacaaaaacataagggctacatacac
tacacaatatattgatgaaCAATATctgacaatatggtttgcggaccgta
atgtactaAGTAAATAGCAggtacttttttatgaaaaggaattttctttc
tgtaaacaatccccctatattgttggaatattgcaaatcaagctgacaat
atattgcggcaTGGCCCCCCGtcaatattttgcaaattatttttttttcg
ctttaaaaaatctgatatataccgtttagaggggtgaaataagggtgaaa
agtcgaaaattttcttcgtcgcccaaccatggagGGCAACATATATTTTT
GGCCCCTCAATTCGATTCGCACGCCGAGGGCCATGtagcggacacctttt
caatatattgacGGCATTCAGCGATATATTGGCTGAcaatattgtgtagt
gtatgtagcccttataGTGAAAACGAAAGAAACACACAAAAACAGGCTAT
CAAAAAAGACATAGACAAGCTAGACAAACAAACCAGATCAATATTCACGC
GGTCCAAATTGCGTCACaacaaaaacacaaattttcctAGAAGGAAACTT
GCtccttcaaagaaaaaaatgaccgtgggaCCGATAAAAGCAATCTTTAA
TTTTCTANAATGACCGTGGGACCGATAAAAGCAATCTTTAATATTCTTTT
CCTAGGATTTTCTTATGTCTTTTAGTAATACAGCGAGCTTGTGTGTTTTA
GGAGGAGGGTGGACAACGATTCAACGCCGAGTAAACGGTGACATTGATTT
CAATCGAGGTTGGCAATCATACAAAGAAGGCTTTGGCGATGTCAATGGTG
ATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTGTGTTGTTGAAT
AACACTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGAGATCGAAGATT
TATCATTGCAAAGGTAAAATTATAAAACTTATTAACCATTGGCGTGGTAA
GCTTTAGAGGAGACTGGTAACGAATataagagaaaaattattttcaacag
CGGTATCAAAAAGCACAATTTTATAGGAGCAATCTTGTGAAACAAAGTAA
GGTAACCTTCCATTGAAGTGACCCCAATATAGTTAAGTTACAGTATTCGA
ATGCTAAATTAGTTTGCACTCCACTGCAGAGGCCCAGGGAAATGCCTCAT
ATGGAAAAGAGTTTTTGCAGGAGTTTccttggtttgttttttttgtaaga
caGCCTTAAAATACTTTGCGCCAAGATGAGATTTTCCTTGTAAATTCGTT
ACCCATCCCCTCAAAAGCCAACCTCGCCGCTAAGAGTTGAAATGTGTATT
GCATACGGTATAATATTTGAAGTTTTCGCTTCGGTTATTATGAGTAGAAT
ACTTACTTACATCAAGCAAAAATGTCAGTTTATCAGACTTCAGTTGTTCA
ACCtattttttttcgggacactaTGTACAGTCCTTTGAAACTTTGTATAA
CCAGGAGCCTAATTGACATCAAAAGAAGTATACCATCTTTTCCCGTTTAA
TGAATAGGGATTCTACATCAAAGACGAACAAAAGAAATACAAATTGCATT
CTGGGACAATGATCAATGATGAATGGGATATCGGACGTGATTGGACATTT
CAAGATGGTGAAATGTTCACAACACAAGATGATGATAATGATAAAAAAGG
TGGTGTNATCGAagacgaacaaaaaaaaatacaaattacaTTCTGGGACA
ATGATCAATGATGAAGAGAATATCGGACTTGATTGGACATATCAAGATGG
TGCAATGTTCACAACACGGGATGATGATAATGATAAAAAAGGAGGTGGCA
ATTGTGCACAAGAATTTGCTTGTGCTTGGTGGTATGTGCGCTGTTTCGCA
ATGAATGCTAACAGAGCACcagcaaaacaacaacaaacaacatACGCAGG
CGGTATCAACTGGCCCGCCTGGCTGGGCAGTCACTATCAATCATTGAAAG
CCATGAATATGGCAATAAAGAAAATGACCTAATCAAAAGCCTCCTTTTTA
ATAACCGCAACAATTTGATTACAAATAACTTGACCGAAATTTAATCAACG
AGCctcatttattcaaaaaaaaacataagtaATAGTTTTCGCACGGTACC
GAATACAATATGGAATATGTTTTTCTCGTTTAgagaaatatatattttcc
tcgcctataTCTAATATTGTACCGTTAAAAGTacgataactggtttatcg
tcaacttgaaaaatatctaCAAAAACTTTTCTCCCTCTATTTgtgtcttt
ttctatgttttgcTTTTCTCTTCTTGGTTTTTCTCTCGCTAATTtgatga
aatcaacatcaacacattcgaaaaaaataatcgAACGGCcattaaaaaga
caaaaacatttCTAATAAGTTGTTGTGTATTGCAAgcgaaaagaaaacat
ttccaACCATATAATTGTAAAAGCTATGATATCTCGTttaccagacccct
tttttgAATGCAGTCTTGTAATTTTACGATCCAATATGACCGTGCCTTCT
TTGGCCCAttagattgctcatatttttttgACGATAAGtctgttttaaaa
aagaattggaaGTTTTCTATATTTCGAAATAATGCTTTTGAGTGAAAAAA
GATATCGTTAAAAAAAGTATTCTTTTTAGGCCTTTTATAggcttttaaaa
atccgaagaaaatattgaaaaaatgaaaacgaaatacagaagatttgatc
aaaaaatttccaaattaaatttccCTGAGAGTGGGAGCTAAACAGACTTC
AAATAATCTATTCAGAATTTGCTATATCTTGGTTAGATATTCTGGCAATA
GGTCCAATTCAAACATTTTAAGCCAAATTTTAAGAGAAAACTTAAGAAAC
GAAATTCTTTCGGGACAGACTTCAAGAAAATACTGGTTTtaaagtttctt
tctttttattagtttCATTAGTTTTATCTAAGAATAGTGCAAAGANCTAC
CACAAAATTGCCTTATACTGCAACGAGGATATAAATCTGAGCACTCCTTA
AacagtattttttttgtcttacaCATACACACCCTTTAAAAGTGCCATCA
CTCAGTGACTACAagttatcaattttattttgatttcacaTGCACGTGCA
CACCCTAAATAACAATAAATTGCCAATCTGGACAGTTTTTAATACCACAA
TAATGGTCTCTAAAAGGCTGTATTTCAACTTAAGATTCTCACATAATTTA
TATAGCACAAACGTAAAGCTTACACTAGAGCCCACCTATATTTCATTGGG
CAAACACCTTTGTAGTTAGTAACAAATAAAATGTTATTGTTATTCTGTAA
CTGTAAGCATATActctttttatcaaaaaagaaatttataaaaagagCAT
AATGGCTTATATTAGCACAAACAACAAAGACCAGTCTGAAGATAATACAG
AATCATGTttgaactcgatacttttttccggATACcctgtACCGGGGGGG
GGGGGCACTCGATTTCGAAACGACGGTATGTGCCGCGCAAAAATCTGCTT
TTCAAAATCGTACCCTTACAGTGCAGTTCAATATGGCTGAAAAGgtaccc
tttcagtgcactttctcttgatttacccaacccttatagtgcactatatt
tctcagctgtaaatctgcctgaaagaagaagcttgggaaattttctgttt
caaagaaaaactaagaaaataatTCTTATCAGCTGtaaattatcagacaa
tagaaactttttcaaacaaacggtTTTTACTACCTTTCTTtataacaatt
attttgaagtttttttaaaattcgacccttgcagtgcaatcNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgtaacagacggacggacggacggacga
acgaacggacatgggttaatttataggacctccaccggggcacccggagg
taggtccaaaaattagaaaaaattaatgatccaattttttaaagtgcaaa
aaacacgttttttagacgttttttggcctaaatttgcccaaaaacatttt
ttttcgaaaattgggctccgtcactttcgagggtttatagttacgcatct
ttgtgcaaaaaataatgaagaatGAAACAggcaatcttgagaaaagctaa
tacctaagtaattgataatgtgcttataaaaaaatatcgaatttggccag
tttttctacaaaaacacgccaagcaaccaaaggTTCATGTCTAAACNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNggtgacccacgaaaaagttcggacgtttctcggcgtcttgaggccgaa
caaatgtcccaaagtgcttggagttttattatttagaaagtagatatcct
aacttaaaatttgagctatcactttttaaatttgaccaactagttctcta
cttatgacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNaagtgtaaaaaacaggtaaaaaaggggtatca
aattaggtatttttagacgtttttgatatacagtttttgagaaaattcct
tgaaagtgccaattttgataaaagctagtcttgttttaaacaaaaactac
tttcaaaggtgtttttaataattattaatgtcataaaactcgttaaataa
gtaaatttataagagattttctaattgattgcattaatttaatacctctt
ttttacgtgttttttacactttctgaaaagtgaattttgagtttaaaagg
tcataagtagagaactagttggtcaaatttaaaaagtgatagctcaaatt
ttaagttaggatatctactttttaaacaccaaaattccgagcactttggg
acatttgttcggtctcaagacgccgagaaaggtccgaactttttcgtggg
tcacccggtatattctttaaaagtaaagcccttatgagaaaaaaaaaaca
tctatctcataaaaaaatttagtaatttgactaagaacattgatgtaagC
TTGTTAATATTGATTCGTATAGATAAACATGAgttttttaagccaacaaa
attttttggcaaaaatctgcttgagccatctttcaCCTATGagggtaccc
tactttcatacaaaaaatcagaaaaaattaactatggaatatttcacaaa
gtccaaaaaacctgttttttagccgttttttggcccaaatttgcctttaa
tttttttttttgaaaattgggctccgtcacattcaagggtttatagttat
gcatctttttGCATTCTTACTTATTCTGGCGTTTTATTTCTAAgtatttg
attgatttttaacgTTTGAAATGTCACCAGAAAGTTTTAATCCTTTGCCG
TTTAATGAACAGGGATTCTACATCGAAGacgaacaaaaaaataatacaaa
ttACATTCTGGGACAATGATCAATGATGAAGAGAATATCGGACTNaaaaa
aaatacaaattacaTTCTGGGACAATGATCAATGATGAAGAGAATAACGG
ACGTGATTGGACATATCAAGATGGTGCAATGTTCACAACACGGGATGATG
ATAATGATAAAAAAGGAGGTGGCAATTGTGCACAAGAATTTGCTTGTGCT
TGGTGGTATGTGGGCTGTTTCGCAATGAATGCTAACAGAGCACcagcaaa
acaacaacaaacaacatACGCAGGCGGTATCAGC

Coding sequence (CDS) from alignment at sc0000005:196585..204218+

>TCONS_00000692 ID=TCONS_00000692|Name=TCONS_00000692|organism=Clytia hemisphaerica|type=CDS|length=4635bp|location=Sequence derived from alignment at sc0000005:196585..204218+ (Clytia hemisphaerica)
ATGTTCTCTGCGAGAATACAAATGGACATGCATAAAGTAATAATTTGTAG
CTTAATGGTTTCCCTTATCATTAATGGGAATCTTGCACAAGAAATGCAAC
TTAACTCTCATTTTCGcctggaaaaagaaaattacatcATCAAAAATGGC
TCTCATATACCATCAGAAGAATTTGTTATCAAAGGCTCGGAAATTGAATG
CTTGTTAAAATGTCAACTCAATTATTTGGCGTGCTTCACTCTTGAAATTC
TGAAGATGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATGTCGATTTC
ATGAAATTGAGTTATGAATCAAAAGAGGGGTCAATGGTTTATTCTACTAC
TGCACGAAGTTGTTTAGAATGGTTGGAAAGAGGCTTCACATTGGATGGTG
TGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACTGCGACATG
ACTGGAGGAGGGTGGACAACGATTCAACGCCGAGTAAACGGTGACATTGA
TTTCAATCGAGGTTGGCAATCATACAAAGAAGGCTTTGGCGATGTCAATG
GTGATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTGTGTTGTTG
AATAACACTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGAGATCGAAG
ATTTATCATTGCAAAGGGATTCTACATCAAAGACGAACAAAAGAAATACA
AATTGCATTCTGGGACAATGATCAATGATGAATGGGATATCGGACGTGAT
TGGACATTTCAAGATGGTGAAATGTTCACAACACAAGATGATGATAATGA
TAAAAAAGGTGGTGGCAATTGTGCACAAGAATTTGCTTGTGCTTGGTGGT
ATGTGCGCTGTTTCGCAATGAATGCTAACAGAGCACcagcaaaacaacaa
caaacaacatACGCAGGCGGTATCAGCATGTTCTCTGCGAGAATACAAAT
GGACATGCATAAAGTAATAATTTGTAGCTTAATGGTTTCCCTTATCATTA
ATGGGAATCTTGCACAAGAAATGCAACTTAACTCTCATTTTCGcctggaa
aaagaaaattacatcATCAAAAATGGCTCTCATATACCATCAGAAGAATT
TGTTATCAAAGGCTCGGAAATTGAATGCTTGTTAAAATGTCAACTCAATT
ATTTGGCGTGCTTCACTCTTGAAATTCTGAAGATGGGTTTAACAAGCTGG
TTGTGTCGATTTTACAATGTCGATTTCATGAAATTGAGTTATGAATCAAA
AGAGGGGTCAATGGTTTATTCTACTACTGCACGAAGTTGTTTAGAATGGT
TGGAAAGAGGCTTCACATTGGATGGTGTGTATAAAATACTGACCGTTGGA
GAAGAAAAGGAAGTCTACTGCGACATGACTGGAGGAGGGTGGACAACGAT
TCAACGCCGAGTAAACGGTGACATTGATTTCAATCGAGGTTGGCAATCAT
ACAAAGAAGGCTTTGGCGATGTCAATGGTGATTTTTGGATTGGTTTGGAA
ACCATTCGAGAAATGAGTGTGTTGTTGAATAACACTTTGATTCGAATTCA
AGGTGAAAGTTTTAACGGAGATCGAAGATTTATCATTGCAAAGGGATTCT
ACATCAAAGACGAACAAAAGAAATACAAATTGCATTCTGGGACAATGATC
AATGATGAATGGGATATCGGACGTGATTGGACATTTCAAGATGGTGAAAT
GTTCACAACACAAGATGATGATAATGATAAAAAAGGTGGTGGCAATTGTG
CACAAGAATTTGCTTGTGCTTGGTGGTATGTGCGCTGTTTCGCAATGAAT
GCTAACAGAGCACcagcaaaacaacaacaaacaacatACGCAGGCGGTAT
CAGCATGTTCTCTGCGAGAATACAAATGGACATGCATAAAGTAATAATTT
GTAGCTTAATGGTTTCCCTTATCATTAATGGGAATCTTGCACAAGAAATG
CAACTTAACTCTCATTTTCGcctggaaaaagaaaattacatcATCAAAAA
TGGCTCTCATATACCATCAGAAGAATTTGTTATCAAAGGCTCGGAAATTG
AATGCTTGTTAAAATGTCAACTCAATTATTTGGCGTGCTTCACTCTTGAA
ATTCTGAAGATGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATGTCGA
TTTCATGAAATTGAGTTATGAATCAAAAGAGGGGTCAATGGTTTATTCTA
CTACTGCACGAAGTTGTTTAGAATGGTTGGAAAGAGGCTTCACATTGGAT
GGTGTGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACTGCGA
CATGACTGGAGGAGGGTGGACAACGATTCAACGCCGAGTAAACGGTGACA
TTGATTTCAATCGAGGTTGGCAATCATACAAAGAAGGCTTTGGCGATGTC
AATGGTGATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTGTGTT
GTTGAATAACACTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGAGATC
GAAGATTTATCATTGCAAAGGGATTCTACATCAAAGACGAACAAAAGAAA
TACAAATTGCATTCTGGGACAATGATCAATGATGAATGGGATATCGGACG
TGATTGGACATTTCAAGATGGTGAAATGTTCACAACACAAGATGATGATA
ATGATAAAAAAGGTGGTGGCAATTGTGCACAAGAATTTGCTTGTGCTTGG
TGGTATGTGCGCTGTTTCGCAATGAATGCTAACAGAGCACcagcaaaaca
acaacaaacaacatACGCAGGCGGTATCAGCATGTTCTCTGCGAGAATAC
AAATGGACATGCATAAAGTAATAATTTGTAGCTTAATGGTTTCCCTTATC
ATTAATGGGAATCTTGCACAAGAAATGCAACTTAACTCTCATTTTCGcct
ggaaaaagaaaattacatcATCAAAAATGGCTCTCATATACCATCAGAAG
AATTTGTTATCAAAGGCTCGGAAATTGAATGCTTGTTAAAATGTCAACTC
AATTATTTGGCGTGCTTCACTCTTGAAATTCTGAAGATGGGTTTAACAAG
CTGGTTGTGTCGATTTTACAATGTCGATTTCATGAAATTGAGTTATGAAT
CAAAAGAGGGGTCAATGGTTTATTCTACTACTGCACGAAGTTGTTTAGAA
TGGTTGGAAAGAGGCTTCACATTGGATGGTGTGTATAAAATACTGACCGT
TGGAGAAGAAAAGGAAGTCTACTGCGACATGACTGGAGGAGGGTGGACAA
CGATTCAACGCCGAGTAAACGGTGACATTGATTTCAATCGAGGTTGGCAA
TCATACAAAGAAGGCTTTGGCGATGTCAATGGTGATTTTTGGATTGGTTT
GGAAACCATTCGAGAAATGAGTGTGTTGTTGAATAACACTTTGATTCGAA
TTCAAGGTGAAAGTTTTAACGGAGATCGAAGATTTATCATTGCAAAGGGA
TTCTACATCAAAGACGAACAAAAGAAATACAAATTGCATTCTGGGACAAT
GATCAATGATGAATGGGATATCGGACGTGATTGGACATTTCAAGATGGTG
AAATGTTCACAACACAAGATGATGATAATGATAAAAAAGGTGGTGGCAAT
TGTGCACAAGAATTTGCTTGTGCTTGGTGGTATGTGCGCTGTTTCGCAAT
GAATGCTAACAGAGCACcagcaaaacaacaacaaacaacatACGCAGGCG
GTATCAGCATGTTCTCTGCGAGAATACAAATGGACATGCATAAAGTAATA
ATTTGTAGCTTAATGGTTTCCCTTATCATTAATGGGAATCTTGCACAAGA
AATGCAACTTAACTCTCATTTTCGcctggaaaaagaaaattacatcATCA
AAAATGGCTCTCATATACCATCAGAAGAATTTGTTATCAAAGGCTCGGAA
ATTGAATGCTTGTTAAAATGTCAACTCAATTATTTGGCGTGCTTCACTCT
TGAAATTCTGAAGATGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATG
TCGATTTCATGAAATTGAGTTATGAATCAAAAGAGGGGTCAATGGTTTAT
TCTACTACTGCACGAAGTTGTTTAGAATGGTTGGAAAGAGGCTTCACATT
GGATGGTGTGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACT
GCGACATGACTGGAGGAGGGTGGACAACGATTCAACGCCGAGTAAACGGT
GACATTGATTTCAATCGAGGTTGGCAATCATACAAAGAAGGCTTTGGCGA
TGTCAATGGTGATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTG
TGTTGTTGAATAACACTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGA
GATCGAAGATTTATCATTGCAAAGGGATTCTACATCAAAGACGAACAAAA
GAAATACAAATTGCATTCTGGGACAATGATCAATGATGAATGGGATATCG
GACGTGATTGGACATTTCAAGATGGTGAAATGTTCACAACACAAGATGAT
GATAATGATAAAAAAGGTGGTGGCAATTGTGCACAAGAATTTGCTTGTGC
TTGGTGGTATGTGCGCTGTTTCGCAATGAATGCTAACAGAGCACcagcaa
aacaacaacaaacaacatACGCAGGCGGTATCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000436XLOC_000436Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000692-proteinTCONS_00000692-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000692-exon-sc0000005-1491911889:196585..197191TCONS_00000692-exon-sc0000005-1491911889:196585..197191Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1510915933:196585..197191TCONS_00000692-exon-sc0000005-1510915933:196585..197191Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1575043694:196585..197191TCONS_00000692-exon-sc0000005-1575043694:196585..197191Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1491911889:198886..199097TCONS_00000692-exon-sc0000005-1491911889:198886..199097Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1510915933:198886..199097TCONS_00000692-exon-sc0000005-1510915933:198886..199097Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1575043694:198886..199097TCONS_00000692-exon-sc0000005-1575043694:198886..199097Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1491911889:199692..199836TCONS_00000692-exon-sc0000005-1491911889:199692..199836Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1510915933:199692..199836TCONS_00000692-exon-sc0000005-1510915933:199692..199836Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1575043694:199692..199836TCONS_00000692-exon-sc0000005-1575043694:199692..199836Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1491911889:199979..200075TCONS_00000692-exon-sc0000005-1491911889:199979..200075Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1510915933:199979..200075TCONS_00000692-exon-sc0000005-1510915933:199979..200075Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1575043694:199979..200075TCONS_00000692-exon-sc0000005-1575043694:199979..200075Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1491911889:204200..204218TCONS_00000692-exon-sc0000005-1491911889:204200..204218Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1510915933:204200..204218TCONS_00000692-exon-sc0000005-1510915933:204200..204218Clytia hemisphaericaexon
TCONS_00000692-exon-sc0000005-1575043694:204200..204218TCONS_00000692-exon-sc0000005-1575043694:204200..204218Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:196585..204218 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0224775	0.0742113	0	0.190886	0	1.05873e-08	0	0.316468	0.0189095	0.174769	0.297569	0.0693873	0.052477	0	0	0.315956	0.303078	0.539073	0.566309	1.28808	0.678523	2.04194	5.07189	1.42302	0.856043	0	0.548871
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
Blast
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BLAST of TCONS_00000692 vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 3.007e-29
Identity = 71/198 (35.86%), Postives = 105/198 (53.03%), Query Frame = 1 
Query:  496 STTARSCLEWLERGFTLDGVYKI-LTVGEEKEVYCDMT--GGGWTTIQRRVNGDIDFNRGWQSYKEGFGDVNGDFWIGLETIREMSVLLNNTLIRIQGESFNGDRRFIIAKGFYIKDEQKKYKLHSGTMINDEWDIGRDWTFQDGEMFTTQXXXXXXXXXXXCAQEFACAWWYVRCFAMNANRAPAKQQQTTYAGGIS 1080
            +T  R+C + L+RG+ L G + I L       V CDM   GGGWT  QRR++G +DF R W +YK+GFG   G+FW+G + I  ++    ++ +R+    F G+ +F   K F + DE +KYKL  G  +      G   T  +   F+T+ D ++     NCA++F  AWWY  C A N N         +YA GI+
Sbjct:  112 ATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTA-QGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGGS--AGNSLTGHNNNFFSTK-DQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYANGIN 305
The following BLAST results are available for this feature:
BLAST of TCONS_00000692 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN13.007e-2935.86Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2[more]
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