TCONS_00000692-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000692-protein
Unique NameTCONS_00000692-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length309

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000692-protein ID=TCONS_00000692-protein|Name=TCONS_00000692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
MFSARIQMDMHKVIICSLMVSLIINGNLAQEMQLNSHFRLEKENYIIKNG
SHIPSEEFVIKGSEIECLLKCQLNYLACFTLEILKMGLTSWLCRFYNVDF
MKLSYESKEGSMVYSTTARSCLEWLERGFTLDGVYKILTVGEEKEVYCDM
TGGGWTTIQRRVNGDIDFNRGWQSYKEGFGDVNGDFWIGLETIREMSVLL
NNTLIRIQGESFNGDRRFIIAKGFYIKDEQKKYKLHSGTMINDEWDIGRD
WTFQDGEMFTTQDDDNDKKGGGNCAQEFACAWWYVRCFAMNANRAPAKQQ
QTTYAGGIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000436XLOC_000436Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000692TCONS_00000692Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 116..297
e-value: 9.5E-30
score: 114.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 118..307
e-value: 7.1E-40
score: 137.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 112..309
score: 36.368
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 113..300
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 29..259
e-value: 7.9E-44
score: 149.4
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 260..309
e-value: 6.6E-12
score: 44.9

Blast
[Close]
BLAST of TCONS_00000692-protein vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.066e-34
Identity = 74/198 (37.37%), Postives = 106/198 (53.54%), Query Frame = 0 
Query:  115 STTARSCLEWLERGFTLDGVYKI-LTVGEEKEVYCDMT--GGGWTTIQRRVNGDIDFNRGWQSYKEGFGDVNGDFWIGLETIREMSVLLNNTLIRIQGESFNGDRRFIIAKGFYIKDEQKKYKLHSGTMINDEWDIGRDWTFQDGEMFTTQDDDNDKKGGGNCAQEFACAWWYVRCFAMNANRAPAKQQQTTYAGGIS 309
            +T  R+C + L+RG+ L G + I L       V CDM   GGGWT  QRR++G +DF R W +YK+GFG   G+FW+G + I  ++    ++ +R+    F G+ +F   K F + DE +KYKL  G  +      G   T  +   F+T+D DND     NCA++F  AWWY  C A N N         +YA GI+
Sbjct:  112 ATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTA-QGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGGS--AGNSLTGHNNNFFSTKDQDNDVS-SSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYANGIN 305
The following BLAST results are available for this feature:
BLAST of TCONS_00000692-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN11.066e-3437.37Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2[more]
back to top