TCONS_00000642 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000642
Unique NameTCONS_00000642
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000642 ID=TCONS_00000642|Name=TCONS_00000642|organism=Clytia hemisphaerica|type=transcript|length=124bp
GGAATGTTAAAATCACCGCATATGTAAAGATCAGGACAGCAACCATAGAG
AGTTTCAATCTTTGATACTATTGATGATATAAGCTCTGCGAATTCTGGTG
CATCTGATTTGTGATTTGGGTTTG
Run BLAST on NCBI

transcript from alignment at sc0000002:786690..786813

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000642 ID=TCONS_00000642|Name=TCONS_00000642|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at sc0000002:786690..786813 (Clytia hemisphaerica)
CAAACCCAAATCACAAATCAGATGCACCAGAATTCGCAGAGCTTATATCA
TCAATAGTATCAAAGATTGAAACTCTCTATGGTTGCTGTCCTGATCTTTA
CATATGCGGTGATTTTAACATTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000388XLOC_000388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000642-exon-sc0000002-1491911889:786690..786813TCONS_00000642-exon-sc0000002-1491911889:786690..786813Clytia hemisphaericaexon
TCONS_00000642-exon-sc0000002-1510915933:786690..786813TCONS_00000642-exon-sc0000002-1510915933:786690..786813Clytia hemisphaericaexon
TCONS_00000642-exon-sc0000002-1575043694:786690..786813TCONS_00000642-exon-sc0000002-1575043694:786690..786813Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:786690..786813 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000642 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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