TCONS_00000637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000637
Unique NameTCONS_00000637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000637 ID=TCONS_00000637|Name=TCONS_00000637|organism=Clytia hemisphaerica|type=transcript|length=276bp
CGAATTCCCCTTAAAACTAAAGTTTGAGAGCATCAACAAtaccatcttta
tcatcctaagggctttGCTAAACCGGCgcttgcgacgacgggaaccgacT
AATGATACAACAGAAGCTTCACTGTTGGTCGTTTACCTGTTTCCAATCAT
TTCTCCCCGTTTCCGTGTCGTTTCCACCAGTTTCCCTGTCGTTTCTCCCC
GTTTCCAGGGCGATTCCCCCCGTTTCCatatcgtttccacccgtttctct
GACGTTTCAGGTTTTAGTTATTAGGc
Run BLAST on NCBI

transcript from alignment at sc0000002:660810..661085

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000637 ID=TCONS_00000637|Name=TCONS_00000637|organism=Clytia hemisphaerica|type=transcript|length=276bp|location=Sequence derived from alignment at sc0000002:660810..661085 (Clytia hemisphaerica)
gCCTAATAACTAAAACCTGAAACGTCagagaaacgggtggaaacgatatG
GAAACGGGGGGAATCGCCCTGGAAACGGGGAGAAACGACAGGGAAACTGG
TGGAAACGACACGGAAACGGGGAGAAATGATTGGAAACAGGTAAACGACC
AACAGTGAAGCTTCTGTTGTATCATTAgtcggttcccgtcgtcgcaagcG
CCGGTTTAGCaaagcccttaggatgataaagatggtaTTGTTGATGCTCT
CAAACTTTAGTTTTAAGGGGAATTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000383XLOC_000383Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000637-exon-sc0000002-1491911889:660810..661085TCONS_00000637-exon-sc0000002-1491911889:660810..661085Clytia hemisphaericaexon
TCONS_00000637-exon-sc0000002-1510915933:660810..661085TCONS_00000637-exon-sc0000002-1510915933:660810..661085Clytia hemisphaericaexon
TCONS_00000637-exon-sc0000002-1575043694:660810..661085TCONS_00000637-exon-sc0000002-1575043694:660810..661085Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:660810..661085 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.521429	0.508476	1.77117	4.62083	3.13416	2.22264	1.34076	3.13801	1.75759	3.80986	1.58483	3.47269	2.4275	2.16084	1.48042	2.22421	1.95717	1.60483	3.32574	3.48015	0.504147	1.47543	0	1.08708	4.47868	4.8155	3.57491	0.763049	2.31498	0.710809
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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