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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000616 ID=TCONS_00000616|Name=TCONS_00000616|organism=Clytia hemisphaerica|type=transcript|length=743bp
ATTGCATTACAATCcttTACACTTAGATGCACATTCATATGTCACGAAAA
CTCAGCAAAGTCGAATACATATTACACGTTTATCAATCTTCACGAATCGT
TATTCATTCTTCATGGTAAACATGCTGCATaaagttaaaaacaaatatca
aaataaaggtCGGATCTTGATCAAAATGTTGGGAAAAATGCTTGTCATAC
TGCTTTACATTTCTCCCGATAACGATGTATCCTGTTAACGATATATCCTG
TATCCTAATTATGCTGTACCCTGTTTACACTATATCCCGCTAACGTTGTA
TGCTATTTACGTTTTATCATGTTTACGTTCTATCCTGTTTACAATGTATA
ATGTTACGTTTCTGGTTTTATTATCACTGGTGAATGTTCTCATGATTGTA
CCTTTGAATTTGATTGTACTTTTGGAGTAACGGAATTGTATGTTTTGTGG
ATGATTCAATGTTTGTTATCAGACACTATTTTGCATGGAGAATAATGGAc
ataaattttcacaaaatgatatgattttgtaaagttttatttcggaataa
accagccgaggctggaaggtcagccaatagagcttagctagatagcttta
ataagtgggttaacagatgtaagagatgtacatgttttttttttataagc
aagtgtctgcccctacatcaggctcgcattatgcttagcattctattgtt
ctcaaacaatagagccattgtttgggtaccaaaaactgagcct Run BLAST on NCBI transcript from alignment at sc0000002:1757946..1759041- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000616 ID=TCONS_00000616|Name=TCONS_00000616|organism=Clytia hemisphaerica|type=transcript|length=1096bp|location=Sequence derived from alignment at sc0000002:1757946..1759041- (Clytia hemisphaerica)
ATTGCATTACAATCGTGAGTATAACAAAATTTAACTATTCAATTTCTAGT
CATCTTTATTCACTATGAAGAAATTGGAAAAATGGTTTTGAAAATTTCAT
AAGGGTATAAGGTTCCTTATTGTTCCGAACATACATCTTGAAATTTCTGT
CTGCCACTTTTGATAAATTATATATATATTAAATCTTAGCTTAGTTGGGA
GAGTAATTGCCCTCCAAGCGAGAGGTCGTAAGTTCAATCCTAACTCGATT
CGTTACCTTTGAGAGAATTGGGAAGTACATTAGTGCGGAATCTATCGACT
CTTATAAACGTTTATTTTCTTTTATCAAAAATCCTCTAATTTCATTGTTT
GTTTTTTTCATTTTAAGCTTTACACTTAGATGCACATTCATATGTCACGA
AAACTCAGCAAAGTCGAATACATATTACACGTTTATCAATCTTCACGAAT
CGTTATTCATTCTTCATGGTAAACATGCTGCATAAAGTTAAAAACAAATA
TCAAAATAAAGGTCGGATCTTGATCAAAATGTTGGGAAAAATGCTTGTCA
TACTGCTTTACATTTCTCCCGATAACGATGTATCCTGTTAACGATATATC
CTGTATCCTAATTATGCTGTACCCTGTTTACACTATATCCCGCTAACGTT
GTATGCTATTTACGTTTTATCATGTTTACGTTCTATCCTGTTTACAATGT
ATAATGTTACGTTTCTGGTTTTATTATCACTGGTGAATGTTCTCATGATT
GTACCTTTGAATTTGATTGTACTTTTGGAGTAACGGAATTGTATGTTTTG
TGGATGATTCAATGTTTGTTATCAGACACTATTTTGCATGGAGAATAATG
GACATAAATTTTCACAAAATGATATGATTTTGTAAAGTTTTATTTCGGAA
TAAACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGCTTAGCTAGATAGCT
TTAATAAGTGGGTTAACAGATGTAAGAGATGTACATGTTTTTTTTTTATA
AGCAAGTGTCTGCCCCTACATCAGGCTCGCATTATGCTTAGCATTCTATT
GTTCTCAAACAATAGAGCCATTGTTTGGGTACCAAAAACTGAGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000616-exon-sc0000002-1575043694:1759028..1759041 | TCONS_00000616-exon-sc0000002-1575043694:1759028..1759041 | Clytia hemisphaerica | exon |
| TCONS_00000616-exon-sc0000002-1575043694:1757946..1758674 | TCONS_00000616-exon-sc0000002-1575043694:1757946..1758674 | Clytia hemisphaerica | exon |
| TCONS_00000616-exon-sc0000002-1510915933:1759028..1759041 | TCONS_00000616-exon-sc0000002-1510915933:1759028..1759041 | Clytia hemisphaerica | exon |
| TCONS_00000616-exon-sc0000002-1510915933:1757946..1758674 | TCONS_00000616-exon-sc0000002-1510915933:1757946..1758674 | Clytia hemisphaerica | exon |
| TCONS_00000616-exon-sc0000002-1491911889:1759028..1759041 | TCONS_00000616-exon-sc0000002-1491911889:1759028..1759041 | Clytia hemisphaerica | exon |
| TCONS_00000616-exon-sc0000002-1491911889:1757946..1758674 | TCONS_00000616-exon-sc0000002-1491911889:1757946..1758674 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:1757946..1759041 - |
Blast
The following BLAST results are available for this feature:
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