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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000606 ID=TCONS_00000606|Name=TCONS_00000606|organism=Clytia hemisphaerica|type=transcript|length=1773bp
TGTATAAGATTCTATTGAGTGGATTCTTCATTACTCAAACACGCATAGGA
AACgtaaatttgttcgaattatggaaatttcgagttatgagaTTGGTTCA
TAATCTAATAAGGCATTGTGAAGGACTGAAGGGcagaaaactttttcgag
ttaacgAGACCATCCGAGTTGtaaaggttcgagttatgaagactccaCTA
TATTAATACTggacacgttttttttataagaatggtgtttttccaattca
tcatgagaatattctcaactttttggtgaaaaacaTCTTGAACTATTCTT
TCGGTTTTCTTGGGTTTGGAACCAAACCCAGCCAAAATCTagcatgtaat
acatacctgaagcaaaaatttggcatttttgtggaACCTTATTTGCATTG
CTGGGGAAAAACTGGCTATTTAATGGTgaaaaaatgctctaaaaacgGTA
TTCTCTGGTTCAGTTGTCGAATTCAATAATTGtggtattcttaccatatt
ctgaaatttttggcaaattttatcatgaatattcttataaagtatatatt
CCTATTTAAAAAAGCATGTATTCACTTTACGTCTAATTAATCTTGAAGTG
ACATTGTAATTACCTTGCAATTAATATTTCTGTTAATTGTGAAATATGAA
CATCTCCTAATTAGAAATGGCATAGATTGAATAATATATCTGCTTGTAGA
GGCCAGCTTGCTGTTTATAGGTGATAAAAATGGCGAGTAAGTaaaacctt
ttctttttctttctttgccATTGTGTTGTGTTTGGAAGCAAATCAATCAT
TTCATCTAAGATGAGGTAGTTTTACTAGGCACTCTAGAGTATCATTATCT
AAACAAGTGTTGGCAAAACTCTCTCTCAATTTTGAATCTCCCCTTTTACG
TCCGCCACTAagaaagcttttcaaaaagtctcATAAATCCTCAAAATGTA
TCTCGTTTGTCACAGGGTATTGATGATTGATTTAAGACACCCGTCAAGGC
CGTTCCCCCAGCCTCGACACAAGCAAGGTTATGGAAGTTTTTTGTATGCT
CTTCAGTACTTTATTGCAGAGGGTCTAGAAAGGGtaaacaaaattctttt
ttagagTAGTTGGAGAGGtaataaaataacaaaagtgTTTCTCACACTAA
ACACGTTTTAAAAGCCGTTAACTTTTTTAAAGGGAGCTTCAAACTGTTTT
TGAAATAGATCACGTTGGTCAAAATATGGcaattttctccaaaattttcg
aaaaatgacaCTTCTCAATTAAGCGCAGAAAAGTACAACATAAAATCGCA
AATTTATAAAATTCATTCTTTCCATTATCATCATAGAGTTCGTACTTGCT
ATTACTTTAATTTACCTAACAATCGTATCCATTGCTGATGGTCGACCTAT
TGAAAAAGATGCTCTACCAAGAAGAAGCCGAAGGGATGTCATAAACAATC
AGAATGCAAATCCAGCAATACTTACTATCATACCATCAACAACTACTGAA
CCATATACCACAGGTTTGATGCACCTATTCGCCCCTGTTTCATTGTTACC
TGCTTTAAAGCCTTTATAAGTATTATTAGTAGGGGGCAAACCCTTCAGGC
ACAGGTCCTAAGCCCCCCTACTATAAGGCTGAAATCTGTCCAAAACCTAA
GAACCAACCAAGAACCAAACGAGCCTTAGAATTTAGAAATTGCTAAGAAA
ATACTAAAAAGTTCCTTTTGAAAGCTCTTTAGTAAGGAAAATGAGAACGA
ATTAAagacattttaagcctaaa Run BLAST on NCBI transcript from alignment at sc0000002:1454814..1456586- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000606 ID=TCONS_00000606|Name=TCONS_00000606|organism=Clytia hemisphaerica|type=transcript|length=1773bp|location=Sequence derived from alignment at sc0000002:1454814..1456586- (Clytia hemisphaerica)
TGTATAAGATTCTATTGAGTGGATTCTTCATTACTCAAACACGCATAGGA
AACGTAAATTTGTTCGAATTATGGAAATTTCGAGTTATGAGATTGGTTCA
TAATCTAATAAGGCATTGTGAAGGACTGAAGGGCAGAAAACTTTTTCGAG
TTAACGAGACCATCCGAGTTGTAAAGGTTCGAGTTATGAAGACTCCACTA
TATTAATACTGGACACGTTTTTTTTATAAGAATGGTGTTTTTCCAATTCA
TCATGAGAATATTCTCAACTTTTTGGTGAAAAACATCTTGAACTATTCTT
TCGGTTTTCTTGGGTTTGGAACCAAACCCAGCCAAAATCTAGCATGTAAT
ACATACCTGAAGCAAAAATTTGGCATTTTTGTGGAACCTTATTTGCATTG
CTGGGGAAAAACTGGCTATTTAATGGTGAAAAAATGCTCTAAAAACGGTA
TTCTCTGGTTCAGTTGTCGAATTCAATAATTGTGGTATTCTTACCATATT
CTGAAATTTTTGGCAAATTTTATCATGAATATTCTTATAAAGTATATATT
CCTATTTAAAAAAGCATGTATTCACTTTACGTCTAATTAATCTTGAAGTG
ACATTGTAATTACCTTGCAATTAATATTTCTGTTAATTGTGAAATATGAA
CATCTCCTAATTAGAAATGGCATAGATTGAATAATATATCTGCTTGTAGA
GGCCAGCTTGCTGTTTATAGGTGATAAAAATGGCGAGTAAGTAAAACCTT
TTCTTTTTCTTTCTTTGCCATTGTGTTGTGTTTGGAAGCAAATCAATCAT
TTCATCTAAGATGAGGTAGTTTTACTAGGCACTCTAGAGTATCATTATCT
AAACAAGTGTTGGCAAAACTCTCTCTCAATTTTGAATCTCCCCTTTTACG
TCCGCCACTAAGAAAGCTTTTCAAAAAGTCTCATAAATCCTCAAAATGTA
TCTCGTTTGTCACAGGGTATTGATGATTGATTTAAGACACCCGTCAAGGC
CGTTCCCCCAGCCTCGACACAAGCAAGGTTATGGAAGTTTTTTGTATGCT
CTTCAGTACTTTATTGCAGAGGGTCTAGAAAGGGTAAACAAAATTCTTTT
TTAGAGTAGTTGGAGAGGTAATAAAATAACAAAAGTGTTTCTCACACTAA
ACACGTTTTAAAAGCCGTTAACTTTTTTAAAGGGAGCTTCAAACTGTTTT
TGAAATAGATCACGTTGGTCAAAATATGGCAATTTTCTCCAAAATTTTCG
AAAAATGACACTTCTCAATTAAGCGCAGAAAAGTACAACATAAAATCGCA
AATTTATAAAATTCATTCTTTCCATTATCATCATAGAGTTCGTACTTGCT
ATTACTTTAATTTACCTAACAATCGTATCCATTGCTGATGGTCGACCTAT
TGAAAAAGATGCTCTACCAAGAAGAAGCCGAAGGGATGTCATAAACAATC
AGAATGCAAATCCAGCAATACTTACTATCATACCATCAACAACTACTGAA
CCATATACCACAGGTTTGATGCACCTATTCGCCCCTGTTTCATTGTTACC
TGCTTTAAAGCCTTTATAAGTATTATTAGTAGGGGGCAAACCCTTCAGGC
ACAGGTCCTAAGCCCCCCTACTATAAGGCTGAAATCTGTCCAAAACCTAA
GAACCAACCAAGAACCAAACGAGCCTTAGAATTTAGAAATTGCTAAGAAA
ATACTAAAAAGTTCCTTTTGAAAGCTCTTTAGTAAGGAAAATGAGAACGA
ATTAAAGACATTTTAAGCCTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000606-exon-sc0000002-1575043694:1454814..1456586 | TCONS_00000606-exon-sc0000002-1575043694:1454814..1456586 | Clytia hemisphaerica | exon |
| TCONS_00000606-exon-sc0000002-1510915933:1454814..1456586 | TCONS_00000606-exon-sc0000002-1510915933:1454814..1456586 | Clytia hemisphaerica | exon |
| TCONS_00000606-exon-sc0000002-1491911889:1454814..1456586 | TCONS_00000606-exon-sc0000002-1491911889:1454814..1456586 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:1454814..1456586 - |
Blast
The following BLAST results are available for this feature:
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