TCONS_00000601 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000601
Unique NameTCONS_00000601
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1808

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000601 ID=TCONS_00000601|Name=TCONS_00000601|organism=Clytia hemisphaerica|type=transcript|length=1808bp
TCGAAAGTAAAATGGCGGATACAAGAGGTGgttctaaaaatgaaagaaga
GGAATTTGATCATCGACATTGCGCTAGGTACAAGAATAACAATGAAAAAG
ACCTGGGAACATACTGTCTTAGAATGGCCACCGATGAAAAATATGGAGCT
ATCGAATTTCAGTATTATGACTCTCTGCGTGTGTGGAATTGTCTCTTTGa
atgtgtattttaccgaaTGCTTCATCAGGCGAAAATCAAGGAATAAAGAC
CACAAGATGATTGATTTTCCTGATTTCTTTCATTCTCTTTTTCGACCAAC
CGATGAGGAGAAAGGAGAAGCTAAAATGATAAACAAAGGAGCCAAGGATG
TGAATAATATTTATGTGGCTGGCTTTTGTCTATGATGTTTATATGTTGAG
CAGTATACATTTGGGAGATAGTTTCCAGTTTTTTAGCGTACGCGAGACCA
CATTGGAACCACTATCGGTGCAACATACCGACAATGAGGAACTATGCAAG
ACGCTATTATGCCACGTTTTCAACCACGACAGCACCTTTAAAATCCCGAC
CGCTTTTTCTATACAATTCGGTTCAAAGGTAGATCATGTTTTTATCGGTA
CAGGTGATATAATGATTGGTGCTTTTGTGGCTAATTTTGCGTCCCGATTT
TTCAAGAAACCAAATTATGTTGCTTTTACAGTATTTGCATTTGGTAGTGC
GGTTAGTTTATTATCGCATGTCGCAACCAATGCACCCTTTCCCGCTCTTT
TGACAATTGTGCCAATTTGTACGCTGGCTTTAATGGTTCTTGCTATATGG
AGTAACAAATCTATGGAANTTCCCGCTCTTTTGACAATCGTACCAATTTG
TACGCTGGCTTTAATGGTTCTTGCTATATGGAGTAATAAATCTATGGAAT
TGCTTCTGGATTGTGAGAAATCTGATTGTAGAACAATACGCAGACAAAGC
GAGGAACTCATCTTGAAAGTTTGAGGTTTGGAGTCTATAAAGGAACAATA
TCCTGCACCAAACTCTTCTTCACTGAAAAGATAACGTGTATAGTGTTGTA
CATGCTAAAGGAACAGTTTTGTATTGCTTTTCTTATGCTAcccttttatt
aaaaagaacgaaaaatataatataaacatTAGATGGATTTTTATGAATAG
ATTTTAATATTAGAAAACTGCGATTGTGATActgtacacccctgtgtcac
agacccgctgggaccccagccccactggaagatTTGGCAAACATTTCATC
CCCAGTAGGAAAATACCCGGtgatttcagccccactgggaaattgacttt
gatttcatccccatccgaaaataaatgtttaaaaactgcTCTCCAAagcc
atccccactggattttttaaccttgaaacaataTATAATTTATATACCCA
TTTGAATTTCGATAGTAATTTTTATCCCCagtgagaaaaaaagttccatc
ggggttgtgatacaggggtgttacTTTCACTATAcctcaaaaatatttca
tcagTAAACAATGAAAACTTCTTTCAGATTGCGGCTCAACATGGAAAAGC
TTTTTTGCTAATCTGATTTTCAAGCGTCAAAAAAGAAAGCAACAATTTTT
CGCGCCTCTAGAAAATTACAATTTAGTCCTTAATTAAAAGGATACATTTT
TTTGTGTATAAAATCATCATATCTAGGATTATTATTTAAtatagagattt
ttttttaacttttaaactattttttaatttttaaacgaaaaaatatatat
catttTACTTTGAGAAATAACAGATCTGAAATCGAACTAAACTCTTACAA
ACTTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00000601-protein

>TCONS_00000601-protein ID=TCONS_00000601-protein|Name=TCONS_00000601-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MWLAFVYDVYMLSSIHLGDSFQFFSVRETTLEPLSVQHTDNEELCKTLLC
HVFNHDSTFKIPTAFSIQFGSKVDHVFIGTGDIMIGAFVANFASRFFKKP
NYVAFTVFAFGSAVSLLSHVATNAPFPALLTIVPICTLALMVLAIWSNKS
MEXPALLTIVPICTLALMVLAIWSNKSMELLLDCEKSDCRTIRRQSEELI
LKV
Run BLAST on NCBI

transcript from alignment at sc0000002:1434045..1451961-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000601 ID=TCONS_00000601|Name=TCONS_00000601|organism=Clytia hemisphaerica|type=transcript|length=17917bp|location=Sequence derived from alignment at sc0000002:1434045..1451961- (Clytia hemisphaerica)
TCGAAAGTAAAATGGCGGATACAAGAGGTGGTTCTAAAAATGAAAGAAGA GGAATTTGATCATCGACATTGCGCTAGGTAGGGTAAATATAATGAATTCA ATTACCGGAGGCAGCGTTACAAAGAATAACTAGTAACTACACGTTTTCTT TATAAGAACATGAAACATTCTCGAAGCCTTCGGATGTTCTTAACTTTTTG AATTTTAAGCCTAAAAATGTTCTTAACATGTTCTTATTTTCACCATCTTA AAAGTATTTTATCCATTTTCCTAAGTAATCGTTTTTTTTGAAGCCTTGCG TTATTTTATAAGAGCATCCAAAACTTTTGAAGCCTTGGGATGTTCTTTTA TAGTGTACACGTTTTTTTATAAGAGCATCCAAAACCTTGGGATGTTCTTA ACTTTAAAATGTTCTTGAATGTTCTTCTTCATATTATTTTGTGACCATTT TTACTCATTTTCCTAAGAAAACGGGTGTTTTGAGTTCACAAAGCCTGAAA TTGTTCTTAACATGCTCTTATTTTCACCATTCGATTATAAGCGATTTTTT TCATCCTCGCTGAATTTTCTGGCTCGAAAACAATTGAATTCAAATCCTCA GCCATAAAGAACATGGGAATATCAATCACCATCGAGTCTTAATCCCTAAT TCTTACCCCGACTGCGGCTGAAAAAATCCTACCGTGTCTGTTAGAAGGGG ATATGTTTGCTATTAGGATGTTTTCATCTTATGATGTTGTCAGTTTGCCT TGGTCACATCGATAGTCTAACTAACAAATTTACTCTGAGTGAATAGATTT TTGGCGAAAAAATTAATTTGGTGATTGATAGTTATTATGCAAAATTTTGC GGGAATTGAATACAAACTCGTGGTTTATTTAGTGTGACAGTCGAAATTTT ATACTTTTTTTAAGTCTTAGGGGGGAGGGTTGAAATTAGATTTCATGTTT TTTGTTAACCCTTAGCGATTTTAAACATCCAGAAAAGATCCCCTTTCGGG CAGCACATACCCCTCCATTAGCAAGATTATCCTCCACCTTGGAGCTCTAA CAGGCAGGGCAAACCGATCCAACATTTCATCCAACATGCCTTTTTTCTGA TGTTGGATGAAATGTTGGACCGATTTGCGTCAATTCAAATTTTTGGAAAA AGATGAAAAATCAAAAAAGGAAGAAAAAAATCGTGTTGGACGGTGTTGGA TGAATTTGATCGCCATCAAACATTTCATCCAACATTTGCGGCGAGATCAA AGCAGCTCTCTCATTGAATTGTGTAATTTTTCGTGTTGGATTGGTTTGGT GGTAATTTTTTCTTTATTTTTTGATTTTTTTGGATCAGATATGAGAGGGA AGGCTATTCAGATTTTCTACAGTAGGAAAGCAAATGATATTGTGAACATT TTGAAATCAAAGCAGTTATCCGGGGAGACATACTGAAATTTCATCTACCG CAGGAACATTAACAGCTTACATCGACAAGGAGGCTGAACACTTTAGACTG CAAAAATAATCTGAAAATCCTCAAGCCGCATTGGTAGACTTGGAAGGTTG GCTTAGAAGGAAGAGAGTGTTAGCGTAAAGTTATAAGCTATAGGTAGAGT GAATCTAGGTAAAAAGAACAAGGTAGAGATGTCAGAAAGGAAAGCGAATG TTCTAGTATCGCTTGCGGTCGAATAATGATAATGATGATATGGAAATGGT TAATTTTTCACTCCTATCAACTCGATTAATTTGCTACTTAGATGCTGATA GTTTGAAAGGAATTTAACGAGTCAACCTTACAATTTTCCCAGAAATAATT TTCTTTTAGGTAAAAATAAAGATCAGATAGCGAATAACGCACGTGGCAAG GTTTAGTATCTTAGTATCTTTCTCATAGATCTGATATGATACAACTTCTT ATAATCTTCTGGTTATAGCTTTCATCTTGTTAAAATAGTTTTATAACTTG TTAACCGCGTATGCCTAAATATAACACAGATTTTATAAGCGATGATGGAT GATGAGGAAATTTAGATGTACAAAAATATAGCTTTGGTTGAAACAGGCTG ATGTACATAGAAAATGATAGACGTATTAAAAAGTCATGGTAGAAAGATTA TGGGTACTCTAGTAATTTTGATGTGCGGTTATAACTAAATATTAGAAATC TAGAAAAGTTCATTCATGATATTTTGAAATTTTAGATCAACCTTTTATTT AATCCATGATTTATATGGGAAATTGTAAAATACATGCTTTGAATGGTACA CATGACTTTTTTTCCAAGTCATATCGGATGAAATGTTGGATCGGTTTGCC CCGGCCTTGATTTTCGCTTCATCCAACGCAAGCTTTTCTATCAAACATTT CATCCAACATTTGAAAATCATGTTGGATGAAATGTTGGACTGGTTTGCCC TGGCCCTATGTGTCGTGCATAAATTTTTGCGTGTTCCTGATTTGCAGTTA AGGCCGAGGTAAACGATTCCAACATTCCATCCAACATGCCATTTTCTCTC TGTTGAACAGAATGTTGGAATCGTTTACTCGAATGTAAAAATCGGAAAGG AAGAAAAAATTATGTTGGAAGAAGAAAAAAAGTGTTGGATGGGAGTTTGA TCGCCATCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CCAACATTTCAATTTCTATGTTGGATGAAATGTTGGAATCGTTTACCTCG GCCTTTAGTTGAATTAGTTGAATTGTTTTTGGTGGAAATTTGATTTGAAG GGAAAGATATTTTGAATTTGATAGGAATCTAATTTCGCAGTTAACACTTT TTAACAATAGTTTTTTATAAGAACACCTAAAATTTCTGAAGCTTTCGGTG CTCTAAACTTAAGTCTAAAAATGTTCTTGAAATTTTTTTATTTTTACCCT TTTCTGAGTGTTTTTGTGCAATTTCTTAAAAAATTTAGTGTCTTAGTCCG CAAAGCCTTAAAATGTTCTTTAACTATATTTACTTGTTCTTAAGATTTTG GCCATCGAAGCCTTATGTTCTTATAAGTTTGTTCTTATATAAAAAACGTG TACTTGTTAGTTTACAAGACCTTTGCAACTGAAAATTGTTTGACATTCTT ATAAAAAATTTGTAAAAGCTTTTGTCTTTTCTGGAATAATAAATCGTTTT TCTTATCCTATAAAATATGATTCGGAAATGCCGTGACAAAAGGAAAAGGG AAATCTATGAGCTGAAAAAGACAAGCCATTAACAACTTCCCTTTTAATGA TGATGGTATCTAGTAATCAGACCGAGAACATTACATTAAATTACTGTTGC TTAAGTATTTTCAAATTAATTACAGCTAATGTAATCGAGAAAATAGCTTA TAACAAAGTGTCATTTGAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AACACCAAAAACATGATAAAAATACAAATATTCAGAGCAAGTCTGACAGC ATGATCAAATCCACCATTTAAAAAAAAAACGAGAATGTTTACGAACGCTT GGTTCCACCTACCTAGCACTTGCAGACTGGAATCATTAAATTTTATCTTA GCGAGTGAGTCCATATTTTAGAATCTTCGAGAATGTTCTAGAAGTTTCAA CTACTTTCGTTTTCTAAATTTTTCATTACACCGCCGCCGCGAAAGACGAT CGTAATACTTTCGCTATGCGAAATTAAAAAAGAAACTTTAACAATTGAAC ACGTAAAATAAGAACCAATAACTAACAAATAAGAAAATTTTGACAAGTTT AAGGTCTATCTACACTGTAATAAAATATTGAATTATTCGAATTTAATTAG CGGGGGCGGGGGGTGGATTTTTTTTCTCTTAACAATTAGCGAGGGGACGT CTATTCGGGAGACAAGAGTAGGTCACGTGACATTACAATAGAATTTCAGC GCTTGACCAATCAGAAGCTTCGCAGGTTTTCAAAAACAATACTAATAATG TTCTTTCCGATATTCATTTTTTTGCCTGCGATGGCTCAAAGCACGACATC TAAGCCTATCGGGCTATAAATCTATGGATACACATTTTTTTAATGATGGC CGATTTTGTCATTGATATTCTATTTAAAAAAGTATATTTTTCTCAAAAAA AACATGTACGGTTGATGATCTTAGACCTGATTCAAACCAAAAATTGAAGT GGTCATCTTAAAGGTGAACGATTTATTAATCCAGGAAAGTGGCCCTCAGT GGAGCCCCTGGTCACGTGATTACGCAGAAAATGGTCTTCCTCACGCCATC ACACTAAAAGAAATATTTTTAAATCACGTAACACGCTTTTTGAAATCAAA GACCACGCAATCACGCTATCACGCAATCACGCTATGGGTCTCAACAAACA TAAGGTATAATACCGAACTTTAAATAGAGATTGAGAAGAGCAAAATATAA ACGAAACCCGAATAGGTTTGATCATTTAACTTTTAAGGAAGAAAGAATAC TTGTGTGTTTAAGAATCGGATTCCGAAATTCTATTCTGATTATGAAAAAT TCAAAAATACATACTTTCCAAAAGGCCTTTTTACAGGATAGGACCAATAG ATAGGCGAGACCGATTTAATTTGTTTTTCTACGGGAAGACCTTCAGGAAA ATACGCGTCGGTCAGTATGGTATAATAAAAATGGATTTGGGGTCGGAAGG TCAAGATCTGAAAGATTTGTGACTTTTCAAAGCAGTAAATTTGTTCTTCT TTAACGATGGGCGACCTTCGTACCAGTTCCATTGTGATATTTAAATTTAT CTAAGTTCTAGGACGAAATTACACTTTTTCAACTTGTTCAGCTAAAAATA TCAGCAAAGAAAATATAAAATCCATCCTCCAGCTTTGCAAATTCAATATT TTTGTTTTTCGATTTAGAAAAGACCGGCTCGGTTATCCCCGCAGAACAAT GAATTAATTTTGTCTCACCTAAGAAAGCATGGATTTTCAAAGCTTGCATA AAGAATAATAAGAATAAAATTCAATTTGATGGAAAACGTAGCATTAACAA TGAATGTCGAATTAAAGAGAGTGTTAATTATGTATACATCAAAATCTACT CAATCTAATACACCGTCTAGTAGTGTCGACTGCGCAGGCGTCCAAACAAT TTTCCATTGTTTTGATTTTGGCACTGTGAGATAGCGAGACTGCTAAACGG TGTATTGTACATTAGAACCTAGACGATGTTATCGTCCGTTACAGTGATAG TAAAGGCGGGAAAATGGCGGTATGGCATTATGGCGGTATACGGAAAAAAA TCGGCGGGAGAGTTTCGAAGAAACTGGCAACTCTACCGACTGTAAACTCT TTTCGGCAAGAAAAACCGTTTGCGAATTTTTTTATTCGGCTTTGGGCTTT TTTCTTAGATAGTGATTCGTCTTAGACTATAGCATAGTCTAATTAGAACC TAGAACAGGTGCTTTCTTTTTCAGGCGGCGGTGCAGATTTTCAAGAATCG GCCAAACAACGCCACCGTAAATATCTAGGTGGTCGGATTCATCTAAGGGG TTATTGCCGGGTTTTTGTCGCCAGGTTTCCGGGTTAAGTTTATTGTTTGT TCCCTCATTTATTGTGAGAAATTTAACGAAAGGGAAAAAAGTGAGTTTGA NCGTCGGTCAGTATGGTATAATAAAAATGGATTTGGGGTCGGAAGGTCAA GATCTGAAAGATTTGTGACTTTTCAAAGCAGTAAATTTGTTCTTCTTTAA CGATGGGCGACCTTCGTACCAGTTCCATTGTGATATTTAAATTTATCTAA GTTCTAGGACGAAATTACACTTTTTCAACTTGTTCAGCTAAAAATATCAG CAAAGAAAATATAAAATCCATCCTCCAGCTTTGCAAATTCAATATTTTTG TTTTTCGATTTAGAAAAGACCGGCTCGGTTATCCCCGCAGAACAATGAAT TAATTTTGTCTCACCTAAGAAAGCATGGATTTTCAAAGCTTGCATAAAGA ATAATAAGAATAAAATTCAATTTGATGGAAAACGTAGCATTAACAATGAA TGTCGAATTAAAGAGAGTGTTAATTATGTATACATCAAAATCTACTCAAT CTAATACACCGTCTAGTAGTGTCGACTGCGCAGGCGTCCAAACAATTTTC CATTGTTTTGATTTTGGCACTGTGAGATAGCGAGACTGCTAAACGGTGTA TTGTACATTAGAACCTAGACGATGTTATCGTCCGTTACAGTGATAGTAAA GGCGGGAAAATGGCGGTATGGCATTATGGCGGTATACGGAAAAAAATCGG CGGGAGAGTTTCGAAGAAACTGGCAACTCTACCGACTGTAAACTCTTTTC GGCAAGAAAAACCGTTTGCGAATTTTTTTATTCGGCTTTGGGCTTTTTTC TTAGATAGTGATTCGTCTTAGACTATAGCATAGTCTAATTAGAACCTAGA ACAGGTGCAATCTTTATCAGGCGGCGGTGCAGATTTTCAAGAATCGGCCA AACAACGCCACCGTAAATATCTAGGTGGTCGGATTCATCTAAGGGGTTAT TGCTGGGTTTTTGTCGCCAGGTTTCCGGGTTAAGTTTATTGTTTGTTCCC TCATTTATTGTGAGAAATTTAACGAAAGGGAAAAAAGTGAGTTTGAATAA TGTTATCACAATGTTATCAAAGAAAACAAATCGGTAAATTAAAAAACAAC ATCTTTATCACTCTTTTTTTATGATAGATAGAATTGAACAAACCTTCTAA TATTTATTTGAACGACAAACAGGTCAAAAAAAGTGTTAAAAAACTGTTCG TCGTTTTTTTTTCATTTTAAGTTTACTTCCATCATGTGAAGACATACGTA TGTATGTGTGTAAAAAAGTTTTTTTCGCTTCGAGTAATGGAGGTTGAGTT CTTCAAGAGAATAAATTGATATTTAAATCTTATGTGATCTTGTGGGAGAT GTTTTTTGTATTATAATATTTTTTGAACGGGATTTTCAAGTGTGAAGAAA AGCTAACCAAGAAGCCAACGCGAAATTAGCCTGGAGATCCATGCTCTTCT TTTATATACTGATGGCGAAGTGAATAACATGGTTTGAAATTCAAACGACA GTCGAAGACATATCCAATCAAATTCTGTTACAGTATTACTTCACTGGTCA CACTTTCCTAGAAAAAACGTATTTTTTTCAGTTGTTTCTATATCAGTAAG TGAGGACAGCGCTAAATTCAAGTTTCCCACTGTAAATTTTTTGAGGCAGA GTTGCCTCACAGCCCGAATCCGTCCTGTATACATTAGTTCATAGAATTTT TCATAAAAATACATCCTGTCTAACGTGAAATACTTCAAATTTACAGTCAA ATCGACAATTTTAAAGAAAGATTTGTACACCACAGTATGTATCACAGACC CTTTAATCAAACTTTTATCCCAAATGTGGGGAAAATTTCCACTGGGCGGG CTGTAGGACAGGAGAAATTTGTGCAATTGCGTACCGTGAAAAGCACATGC CGAAATCATATATCAACCTGTGCCGACCAATTCAGATTCTATTCAGAGCG CAATCAACGTAGAGAAAAGTAATCATGACGACAATCCATAATCTTGGATT AAGTTCAAAGTTGATATTTTCATTCCCGTCGTCAAAAACACAAGTAAAGA ATGTTATTTCGATTCCATTGAAGTAACATTACCATAATTAATAGTTTAGT AATCACTGTTATACATTTGGGAATCATGTAGAAGATTTCTTTTGAAAGAA ACTCATTTCAATTACACTTGGAGGTTTCTGGGGAATTCGTAAATAGTAAA GTGCATACTGATACAGTCTGCTAGGTATTAATATGGTAATATTTGCTCTT CATCTTTGATACTTTCTACAGTGATTAAATTGACCCATGCACGATAAAAT TTCTATCATTGGTCTTCAGAGGTTGATATGTTCTTTGAAAACTCAACCTC TGATACTACTCAGGGTACCGATTCCATCTTGATTTGGCCGAATATGGATT AAATATGAATAGCCAAAAACAGCCGAAAATGGATTACCTGAATAATTCAT ACTAATTTTTCGCCCTTCTCATTACTGAGAAACTGAACAGATTTCTGTCT CCAGATATCGGAAGGCATATGTTGATGGAAGCCTCAAAAGGCTAAAAGCT GTTTTATAATAGTTAGCAGATGTCATCATCGGCTGAAATTAAACCCCACT AAGCTTTATTAAGGTTGAGGATTATGTCTCATAACCTTTTTAAAACAGAG AGTGTCTGTTTAAATATTATTCAAACACAACCAAGGTCGACAACAAATGA AAACATATAGGTGTAAATTGATATCCTTGTAGTTAGAAAGCCTTGTTTCC TTGTTATTTACGATGTTTATACATTATATCAATTTTCGATCGAAAAGAAG TCAAATGTATCAGGCTAGCTGGTTGTTGTTGAAGAGTCAAAAGCGAGTTT ATGTATCAGAAATAAATCGAAGGAGACAGTATAAGACAAAGTTGATATGT CGCTAAAATCGCCGTCCACTTTGCTCGACGACGGTAAAAACACAAAAATA CAGTCATCTGTTTAGGTGAGCAAAGGTGATATAAATTCGTACATCGACTA TATCCTTTCTGACTGACGTAAATCGACTATTGACTATATTTTGCCTCGAC TTCATTTAACGTGGCCCTTGATATCCTCCGATTCGCTAGAAATATGAAAG GGAGAGAGAAATTTTTGTTGTGGCTCGGCTGTTATTATATGTTGGCACTT TGAGCCGCTTTGAGCCTCAAGTTGTACTCATCCTGTTTTTATTTTTACAA CAGGCCTGGATAACATTTTTAATACACGATCCCTAAAATCCTTGAAATTC AGCAATTCTAGGCTCAGCATTGTTCTTAAATTGTTCTTGTTTTTTTTTTT GAATTTTTTAGCCTGGTCGTTATCTTATAAAATTGTTCTCATTAAAAAAG AGTGTATGAAAGAGCTTGTGAATTACTAGCAGATATACCATCTTAAATCA CAGCCTCAAGTTTTAAAGCAGGCTTAGTCCATATGTAGATTGCGTATGAG ATACTGGCTAGTTTTTCATCCAGAAGGTTTCTCTTTGCGGTATAATTATT TTCTTCTTCTTTTCTCTTTCCCTTTGTAACTTTGTGAATTCGGCTTTTTA GATTCAGCATGATAGTTTGTTTTGAGTTGAGAAAAAATATTTCACAATAA ATGTCTTGCTCTTCAATTTAAAAAAATTTCATCTTATCATTATTAAACCT GAGATGAGTTATCATTTACGGTTGATATTTTCAAAAGGAAGGAGTGTGGT AAAACATGTTCACTGTAAATAATATGGTAAAACATTTAACGCAAGGATTG TGGTAATTTTTTTCATTCGAGCAATGTGGCAAAACATTTACAAAACAAGG GCGTGTATTNTTTTTTTTCATTCGAGCAATGTTGCAAAACATTTACAAAA CAAGGGCGTGTATTGTAATAATATTTTTAATGTAAATACCTTATTACAAG AATATTAACACGAAATTTTTCCATTCGTGTTAATAAAATGATTAGTAATA TTCGTGTAATAAGGTAGTGTGGTGAAACATTTTCAAAGTAAAGAGTGTGG TAAAACATTTTCAATGTGAAGAGTGTGGCAAAGCATTTTCAATGTGAAGA GTGTGGTGAAACATTTTCAATGTAAAGAGTGTGGCAAAGCATTTTCAATG TGAAGAGTGTGGCAAAGCATTTTCAATGTAAAGAGTGTGGAAAAACATTT TCAAAGTAAAGAGTGTGGCAAAGCATTTTCAATTTGAAGAGTGTGGCTAA GCATTGTCAATGTGAAGAGTGTGGAATAGCATTTTCAAAGTAAAGAGTGT GGTAAAACATTTTCAATGTGAAGAGTGTGGAAAAGCATTTTCAATGTAAA GAGTGTGGCAAAATATTTTCAATGTAAAGAGTGTGGCAAAGCATTTTCAA TGTGAAGAGTGTGGAAAAACATTTTCAATGTGAAGAATGTGGCAAAACAT TTTCAATGTAAAGAGTGTGGCAAAGCATTTTCAATGTGAAGAGTGTGGAA AAACATTTTCAATGTGAAGAGTGAGGCAAAACATTTTCAATGTAAAGAGT GTGGCAAAGCATTTTCAACGTGAAGAGTGTGGAAAAACATTTTCAATGTG AAGAGTGTGGCAAAACATTTTCAATGTAAAGAGTGTGGCAAAGCATTTTC AATGTGAAGAGTGTGGAAAAGCATTTTCAATGTAAAGAGTGTGGCAAAAC ATTTTCAATGTGAAGAGTGTGGTAAAACATTTTCAAATGTGAGGAGTGTG GTAAAACATTTTCAATGTGAAGAGTGTGGTAAAAAAATTCAATGTAAGGA GTGTGGCAAAACATTTTCAATGTAAAGAGTGTGGCAAAACATTTTCAATG TGAGGAGTGTGGTAAAACATTTTCAAATGTGAGGAGTGTGGTAAAACATT TTCAATGTGAAGAGTGTGGCAAAACATTTTCAATGTAAAAAGTGTGGTAA AACATTTTCAAATGTGAGGAGTGTGGTAAAACATTTTCAAATGTGAGGAG TGTGGTAAAACATTTTCAATGTGAAGAGTGTGGCAAAACATTTTCAATGT AAAAAGTGTGGTAAAACATTTTCAAATGTGAGGAGTGTGGTAAAACATTT TCAAATGTGAGGAGTGTGGTAAAACATTTTCAATGTGAAGAGTGTGGCAA AACATTTTCAATGTAAAGAGTGTGGAAAAGCATTTTCAATGTGAAGAGTG TGGAAAAACATTTCCAATGCGAAGAGTGTGGTAAAATATTTTCAATGTGA GGAGTGTGGTAAAACATTTTCAAATGTGAGGAGTGTGGTAAAACATTTTC AATGTGAAGAGTGTGGCAAAACATTTTCAATGTAAAGAGTGTGGAAAAGC ATTTTCAATGTAAAGAGTGTGGAAAAACATTTCCAATGCGAAGAGTGTGG TAAAATATTTTCAATGTGAGGAGTGTGGTAAAACATTTTCAAATGTGAGG AGTGTGGTAAAACATTTTCAATGTGAAGAGTGTGGCAAAACATTTTCAAT GTAAAGAGTGTGGTAAAACATTTTCAAATGTGAGGAGTGTGGTAAAACAT TTTCAAATGTGAGGAGTGTGGTAAAACATTTTCAATGTGAAGAGTGTGGC AAAAAATTTTCAATGTAAAGAGTGTGGAAAAGCATTTTCAATGTGAAGAG TGTGGAAAAACATTTCCAATGTGAGGAGTGTGGTAAAACATTTTCAATGT GAGGAGTGTGGTAAAACATTTTCAAAGTAAAGAGTGTGGCAAAACAAACA TTTTCAATGTGAAGAGTGTGGAAAAACATTTCCAATGTGAGGAGTGTGGT AAAACATTTTCAATATGAGGAGTGTGGTAAAACATTTTCAATGTAAAGAG TGTGGCAAAACATTTTCAATGTGAAGAGTGTGGCAAAACATTGTCAATGT GAAGAGTGTGGCAAAACATTTTCAATGTGAAGAGTGTGGCAAAACATTTT CAATGGTAGGAGCGTGGTAACATTTCCAAATGTGAAGGGTTTGGTAAAAT GTGTAGTTAACAAACATATTCAATACAAAGGCAGTGACCAATAAAATAGT AGAACTCACCTCTCGTCTCTTCTGAATCTTGCTATTCATGTTTTTATCGT TTCCTTTAGGTACAAGAATAACAATGAAAAAGACCTGGGAACATACTGTC TTAGAATGGCCACCGATGAAAAATATGGAGCTATCGAATTTCAGTATTAT GACTCTCTGCGTGTGTGGAATTGTCTCTTTGAATGTGTATTTTACCGAAT GCTTCATCAGGCGAAAATCAAGGAATAAAGACCACAAGATGATTGATTTT CCTGATTTCTTTCATTCTCTTTTTCGACCAACCGATGAGGAGAAAGGAGA AGCTAAAATGATAAACAAAGGAGCCAAGGATGTGAATAGTCAGTTAGATT ACGCTAAATTTATATTCTTCAATTCACTGTATTTTGTTTTCATGTTCATG TTGATAACAGTGTTGCATCAATATGCTGTTATTCTGCTCATTGTTCAACA TTGTGCTGTTATTGGTGTCATATTATTAAACTTTCTACAGTTCGGCAAAC CATCTAGAGCCGTTCCCCTGACAGTTCTGTACGGTTTTCTATGGCTTTCA TCGGTGAACACTGACTATCGCTGGATGCTAAATAATACGATTGTCATCAT GTGTATTTTATTGACCGGTTACATTCGTTTTAAAAACTTTATCTATCTCC AGATATTTATGTGGCTGGCTTTTGTCTATGATGTTTATATGTTGAGCAGT ATACATTTGGGAGATAGTTTCCAGTTTTTTAGCGTACGCGAGACCACATT GGAACCACTATCGGTGCAACATACCGACAATGAGGAACTATGCANTGTAC GTGAGACCACATTGGAACCACTATCGGTGCAACATACCGACAATGAGGAA CTATGCAAGACGCTATTATGCCACGTTTTCAACCACGACAGCACCTTTAA AATCCCGACCGCTTTTTCTATACAATTCGGTTCAAAGGTAGATCATGTTT TTATCGGTACAGGTGATATAATGATTGGTGCTTTTGTGGCTAATTTTGCG TCCCGATTTTTCAAGAAACCAAATTATGTTGCTTTTACAGTATTTGCATT TGGTAGTGCGGTTAGTTTATTATCGCATGTCGCAACCAATGCACCCTTTC CCGCTCTTTTGACAATTGTGCCAATTTGTACGCTGGCTTTAATGGTTCTT GCTATATGGAGTAACAAATCTATGGAANTTCCCGCTCTTTTGACAATCGT ACCAATTTGTACGCTGGCTTTAATGGTTCTTGCTATATGGAGTAATAAAT CTATGGAATTGCTTCTGGATTGTGAGAAATCTGATTGTAGAACAATACGC AGACAAAGCGAGGAACTCATCTTGAAAGTTTGAGGTTTGGAGTCTATAAA GGAACAATATCCTGCACCAAACTCTTCTTCACTGAAAAGATAACGTGTAT AGTGTTGTACATGCTAAAGGAACAGTTTTGTATTGCTTTTCTTATGCTAC CCTTTTATTAAAAAGAACGAAAAATATAATATAAACATTAGATGGATTTT TATGAATAGATTTTAATATTAGAAAACTGCGATTGTGATACTGTACACCC CTGTGTCACAGACCCGCTGGGACCCCAGCCCCACTGGAAGATTTGGCAAA CATTTCATCCCCAGTAGGAAAATACCCGGTGATTTCAGCCCCACTGGGAA ATTGACTTTGATTTCATCCCCATCCGAAAATAAATGTTTAAAAACTGCTC TCCAAAGCCATCCCCACTGGATTTTTTAACCTTGAAACAATATATAATTT ATATACCCATTTGAATTTCGATAGTAATTTTTATCCCCAGTGAGAAAAAA AGTTCCATCGGGGTTGTGATACAGGGGTGTTACTTTCACTATACCTCAAA AATATTTCATCAGTAAACAATGAAAACTTCTTTCAGATTGCGGCTCAACA TGGAAAAGCTTTTTTGCTAATCTGATTTTCAAGCGTCAAAAAAGAAAGCA ACAATTTTTCGCGCCTCTAGAAAATTACAATTTAGTCCTTAATTAAAAGG ATACATTTTTTTGTGTATAAAATCATCATATCTAGGATTATTATTTAATA TAGAGATTTTTTTTTAACTTTTAAACTATTTTTTAATTTTTAAACGAAAA AATATATATCATTTTACTTTGAGAAATAACAGATCTGAAATCGAACTAAA CTCTTACAAACTTTTTT

Coding sequence (CDS) from alignment at sc0000002:1434045..1451961-

>TCONS_00000601 ID=TCONS_00000601|Name=TCONS_00000601|organism=Clytia hemisphaerica|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000002:1434045..1451961- (Clytia hemisphaerica)
ATTGGAACCACTATCGGTGCAACATACCGACAATGAGGAACTATGCAAGA
CGCTATTATGCCACGTTTTCAACCACGACAGCACCTTTAAAATCCCGACC
GCTTTTTCTATACAATTCGGTTCAAAGGTAGATCATGTTTTTATCGGTAC
AGGTGATATAATGATTGGTGCTTTTGTGGCTAATTTTGCGTCCCGATTTT
TCAAGAAACCAAATTATGTTGCTTTTACAGTATTTGCATTTGGTAGTGCG
GTTAGTTTATTATCGCATGTCGCAACCAATGCACCCTTTCCCGCTCTTTT
GACAATTGTGCCAATTTGTACGCTGGCTTTAATGGTTCTTGCTATATGGA
GTAACAAATCTATGGAANTTCCCGCTCTTTTGACAATCGTACCAATTTGT
ACGCTGGCTTTAATGGTTCTTGCTATATGGAGTAATAAATCTATGGAATT
GCTTCTGGATTGTGAGAAATCTGATTGTAGAACAATACGCAGACAAAGCG
AGGAACTCATCTTGAAAGTTTGAATGTGGCTGGCTTTTGTCTATGATGTT
TATATGTTGAGCAGTATACATTTGGGAGATAGTTTCCAGTTTTTTAGCGT
ACGCGAGACCACATTGGAACCACTATCGGTGCAACATACCGACAATGAGG
AACTATGCAAGACGCTATTATGCCACGTTTTCAACCACGACAGCACCTTT
AAAATCCCGACCGCTTTTTCTATACAATTCGGTTCAAAGGTAGATCATGT
TTTTATCGGTACAGGTGATATAATGATTGGTGCTTTTGTGGCTAATTTTG
CGTCCCGATTTTTCAAGAAACCAAATTATGTTGCTTTTACAGTATTTGCA
TTTGGTAGTGCGGTTAGTTTATTATCGCATGTCGCAACCAATGCACCCTT
TCCCGCTCTTTTGACAATTGTGCCAATTTGTACGCTGGCTTTAATGGTTC
TTGCTATATGGAGTAACAAATCTATGGAANTTCCCGCTCTTTTGACAATC
GTACCAATTTGTACGCTGGCTTTAATGGTTCTTGCTATATGGAGTAATAA
ATCTATGGAATTGCTTCTGGATTGTGAGAAATCTGATTGTAGAACAATAC
GCAGACAAAGCGAGGAACTCATCTTGAAAGTTTGAATGTGGCTGGCTTTT
GTCTATGATGTTTATATGTTGAGCAGTATACATTTGGGAGATAGTTTCCA
GTTTTTTAGCGTACGCGAGACCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000354XLOC_000354Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000601-proteinTCONS_00000601-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000601-exon-sc0000002-1575043694:1451885..1451961TCONS_00000601-exon-sc0000002-1575043694:1451885..1451961Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1575043694:1435874..1436152TCONS_00000601-exon-sc0000002-1575043694:1435874..1436152Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1575043694:1435465..1435559TCONS_00000601-exon-sc0000002-1575043694:1435465..1435559Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1575043694:1434045..1435401TCONS_00000601-exon-sc0000002-1575043694:1434045..1435401Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1510915933:1451885..1451961TCONS_00000601-exon-sc0000002-1510915933:1451885..1451961Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1510915933:1435874..1436152TCONS_00000601-exon-sc0000002-1510915933:1435874..1436152Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1510915933:1435465..1435559TCONS_00000601-exon-sc0000002-1510915933:1435465..1435559Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1510915933:1434045..1435401TCONS_00000601-exon-sc0000002-1510915933:1434045..1435401Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1491911889:1451885..1451961TCONS_00000601-exon-sc0000002-1491911889:1451885..1451961Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1491911889:1435874..1436152TCONS_00000601-exon-sc0000002-1491911889:1435874..1436152Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1491911889:1435465..1435559TCONS_00000601-exon-sc0000002-1491911889:1435465..1435559Clytia hemisphaericaexon
TCONS_00000601-exon-sc0000002-1491911889:1434045..1435401TCONS_00000601-exon-sc0000002-1491911889:1434045..1435401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1434045..1451961 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0239643 0 0.174882 10.5259 10.2051 8.53303 7.04063 0.33821 0.79347 1.24466 0.212313 0.457889 0 0 0 0.21409 0 0 0 0 0.00461838 0 0 0.636005 0.710444 0.207622 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000601 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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