TCONS_00000566 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000566
Unique NameTCONS_00000566
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4359

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000566 ID=TCONS_00000566|Name=TCONS_00000566|organism=Clytia hemisphaerica|type=transcript|length=4359bp
GTAATTTAAACTGACCTTTAAATCGAATTTTCCGAGAAACGCAAATggac
tactttcactttcattttaatcgactcattttctttttatagatgttttc
aataaaaatgacCCATAGATGTAGCTGCatattgttttgtttatatttga
tgaTAACTAGTGTTAAAAGTGTAGAAAAGGTTTTGACATACAAAGTGAAC
ACAAAGACTGATTCTATTTGGGAATATGACGATATAGATGCAGATGGTTG
TGAGAAAATCAAATACAAAAGAGGCTTTCAATTGTTTTGTGTTGATGCAA
GATTTTCATGTACTTTAAAATCCAAACCGTTGATTTTGGATGAAtttaaa
agtgaatttttcaatATTACAATTGAGAACAGTCTTGGTGGTTCAGACCC
TTGTGTCAGTTGTTCTGGGGAAATAAGTGGAACTGTTGATTTATTTCAAA
CCTATAAAAAAGACAGTGATGGAAAAATTGATTCTACCAGAAGCCACAAT
TTTGCATTAGCAGAATCTGTAACAAAAACGATACAAAAGAAACCTAATCT
TGAATATATAGAGATTTGGTTAACATTGAGTAGAATATGTAAACAATCAT
TGATTGTCAAATTGAGTTCAGCAGCTTGTAAACCAGTGGAATCAATAAAA
AATCTAATAGATGTACCGAAAGATCAGGTTTTTCCAGCACCCTCTAAAGA
ACAAGAAACAAATGATGTTGGATTGAGTTGTGTTGACAATGCTGTCGTGA
AAGAAGAACCTGTTTTGAAATGTATGGCAGACGCCTCATACCAAATTACT
GGTAGTTGCCAATGTAATGTGAGTTACGAAAAATTTGAAGATCGCTGTCA
AAAGTGCTCTGCCAATTCTTTTAAACTTGATATTGGAAATGGAAAATGTG
AACAATGTAAAGCCAATTCGAATTATAGTGAAGCACTACAGATGTGTGTT
TGTCAAGGAGACTATTTGAGAGCCCTTGATGAAAAAACTAACAGAAATGC
ACCATGTTACAaaaaacctGTCATGCTGTTCTCCAAAGACATTTACATTC
TAAATAACAAGAACACAAGCGTTACTATACAGATGCTTGATTACGGTCCA
TCAACAACGTACATTATCAATTTACCACACAATGTAAGGAAAGTAGCAAA
CaaaccaattttcaaaatcgatCATCTTCGTCCAAATAGTCAATACAACA
TCACAATTGAAGTTCAGAACGATGTGCTGAGCGCGATTGGGGTTGAAATC
AAAGTAACAAAATCATTTTGGACCAATGTCAAAAAACCTGGAGCAGTGAA
GAATATTCGACTTGAACGTGAGACAATATTGATTTGGGATCCAATAACTG
ATGCTGGGCCAGTTGAATATGTCATCGAGATGCAGAATGAAACCTTAACT
ACACCaaataattttcattctttggaaaataatatgaaatttGTTTCTGG
AAAGATTCATGCTGAAGTCAATGGTCCAACAGGCAAAATTAAAGGCTATC
CAATTGCTTTTACCTTCACACCAACCACaccgaaagaaaaaaatgatttt
catttAATTATTGGAGGTTCCGTTGGAGGGTTCTTGTTGATTTTGATCAT
CCTAATGATTGCATTGCTGGTCAAAAAGCATCGAAAACCAGCACAATTTG
AAGTGACAAGAATGGAAGATGGAACAATGACTATTCCCCGAATGACATTA
TTCAAAACAAGTCGACTATACGTCGATCCCACAACTTACTCACATGTGGA
TGAAGCTGTCGAAGAATTTGCGTTGGAACTTGACCGAAGCTGCTTGACTA
TGGACCAACTTATTGGAGGTGGTGAATTTGCAAATGTCTTCAAAGGAATC
TTGAGTACTGAGAGCAGAAACAGTGACGTTGCAATCAAAGTTCTAAAGAG
TGGAGCAAACCGTAGTGATCGTGATGATTTCTTAAGTGAAGCTGCCATCC
TCGGACAATTCTCCGATCCCAATGTTGTATCTATAGAAGGCGTCGTTCTA
AAAGATTACCCAAGTCTGATTGTATTGGAATATATGGCAAACGGATCTCT
GGACAAGTACCTGGTGAAAAATGATTCACAATTCAGTGTAGCCAAATTAT
TGGGTATGGCACGTGGTGTTGCATCAGGGATGAAATATCTGTCAGACCTT
GGATTCATACACAGGGACTTGGCAGCAAGAAATGTTTTAGTGAACAGTGA
AGATTGCTGTAAGATTGCAGATTTTGGCATGAGTCGTGAACTGAAAACAG
ATGATACCTATGATACAAAGGGTGGAAAGATCCCGATAAAATGGACAGCA
CCCGAAGCTATCGAATACAAAAAGTTCACCACAGCCTCTGATGTGTGGTC
TTACGGTATCGTATGCTGGGAAATCTTCTCTTATGGTGAAAGACCTTACT
GGGAATGGAGCAATTACGAGgtTATGGAAAGACTTTCGACTGGCTATCGG
TTACCTCCACCAATgGAATGTCCTAAAGGAATCCATGATCTGATGTTACA
ATGTTGGCACAAAGATCGTTTGAAGAGACCACGTTTCTCCAATATTCTAC
AGAAAGTGGAAGAATGGTTGAAGAATCCTGATCGACTGACTGATATCGCA
TCTGTTATTACCAAAAGGGACGAAAATTTGGATTATTCAGTACTGGATGA
TTTAGCAAGCTGGTTAGAAGCAATAAATatgaaacaatatttgaaaatgt
ttaccgAGAGTGGTTATATGACACCCAAAGATATTCTCTATTTGACCAAT
GAAGATCTAGAATCGCTTGGTGTTGGTTTGATTGGACATCGCAAGAAACT
GTTGAAAGCaattaaaaacaccaaaaaccagACTGAAAGCACCAACAAAT
CAGATACTGACAGCAAAGCATCCAAAGTGAGTCGAACCAGTAGTTTCGCA
GGATTCGGGAGCTCTCTGAGCAAAAAAGTCTCATTTCTGGCAAGTCCTAA
TTCATCAATATCCTTTAAGAAGACAGTCGGAAAACGAACGTCACTCGGAT
ATCAATTGCAATGATTCTGATTGGCTAGATATTAAGCAGTAgtgaatctg
attggatgaataacGAGAAGTAgcgaatctgattggatgaatatcAAGAA
GTAgtgaatctgattggatgattaTCAAGAAGTAgtgaatctgattggat
gaatatcAAGAAGTAgcgaatctgattggatgaatatcAAGAAGTAgtga
atctgattggatgagtATCAAGAAGTAGTGAATCTGATTGAATGAATATC
AAGAAGTAGCGAATCTGATTAGACGATTATCAAGAAGTagtgaatctgat
tggttggaTAAAGAGCAGTGGATCTGATTGGATAAATATCAAGCAGTagt
gaatctgattggttggaTACAAAGCAGTGCAGTggaaatctgattggtta
aaaatcGACAATAAGCTATGAATCTGATGGttgaatgttaaaaaaaatgc
aGGAATAATGAAGATAACTAATCTGGATGAATGAATATAAACAAAAAGTC
ACGACTCTGATAGGGAGATAATTTACAAAAGATATGAATGAATGAACAAT
GGATAATCAACAGATATTGGGTGAACAATAAACTTCGAGAATGATTGGTT
GATAACAAACAATGGACAGTGTTAATTGATGACGTTCACGAAAGAACCAA
AGTCTCATGATGAACTAATGAaattttttagctaaaatgcATGCATGTAT
GAATAACAATTAACCTAATCATAGAAAGCGTATAACATATATGAGAACGA
TGTTGCATGTGATCAAAGTCATTTCGTAATCGAATTCTTTTTTTGGCGAT
TGACAACTGTTGGTAGATCCTGAatcaaaatagataaaaatgcaGATAGT
TGTTCctatcaacaaaacaaaaaagctagaaatctttattttataaatga
TATGCACCAACTGTATGACTGTATTTCTTTctttacgtcacttgcaacaA
ATCAGCTGTTTTGAATAAAGTTAGGAGACATTGCAGGGGTGCATTTCTTA
AATTAACGGTTTACGAAAAAGTACAAATGTATGAGCTTCAACATCAAATC
TTCACGAACAGTTTTTTTTGTGACGAAACTgatataattttttcaatttt
aacaaaGGAAGGGTCAACTCAATAAGttaaattttatttgtaaatatttt
taccacgcaaatcttttttttttgaaaataactaaCGGATGAAATGAAAC
ACACGACTCATTttataaatcaattttttatgtttttactatattttttt
atattttgtacataaatccttttataacttttgagaattttttacaGTGC
TATTTATGAAAACAAACATTTATATTATAACTCTACATAAATCTTGTGCT
TCGATATCG
Run BLAST on NCBI

transcript from alignment at sc0000002:736495..748372-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000566 ID=TCONS_00000566|Name=TCONS_00000566|organism=Clytia hemisphaerica|type=transcript|length=11878bp|location=Sequence derived from alignment at sc0000002:736495..748372- (Clytia hemisphaerica)
GTAATTTAAACTGACCTTTAAATCGAATTTTCCGAGAAACGCAAATGGAC TACTTTCACTTTCATTTTAATCGACTCATTTTCTTTTTATAGATGTTTTC AATAAAAATGACCCATAGATGTAGCTGCATATTGTTTTGTTTATATTTGA TGATAACTAGTGTTAAAAGTGTAGAAAAGGTTTTGACATACAAAGTGAAC ACAAAGACTGATTCTATTTGGGAATATGACGATATAGATGCAGATGGTTG TGAGAAAATCAAATACAAAAGAGGCTTTCAATTGTTTTGTGTTGATGCAA GATTTTCATGTACTTTAAAATCCAAACCGTTGATTTTGGATGAATTTAAA AGTGAATTTTTCAATATTACAATTGAGAACAGTCTTGGTGGTTCAGACCC TTGTGTCAGTTGTTCTGGGGAAATAAGTGGAACTGTTGATTTATTTCAAA CCTATAAAAAAGACAGTGATGGAAAAATTGATTCTACCAGAAGCCACAAT TTTGCATTAGCAGAATCTGTAACAAAAACGATACAAAAGAAACCTAATCT TGAATATATAGAGATTTGGTTAACATTGAGTAGAATATGTAAACAATCAT TGATTGTCAAATTGAGTTCAGCAGCTTGTAAACCAGTGGAATCAATAAAA AATCTAATAGATGTACCGAAAGATCAGGTTTTTCCAGCACCCTCTAAAGA ACAAGAAACAAATGATGTTGGATTGAGTTGTGTTGACAATGCTGTCGTGA AAGAAGAACCTGTTTTGAAATGTATGGCAGACGCCTCATACCAAATTACT GGTAGTTGCCAATGTAATGTGAGTTACGAAAAATTTGAAGATCGCTGTCA AAAGTGCTCTGCCAATTCTTTTAAACTTGATATTGGAAATGGAAAATGTG AACAATGTAAAGCCAATTCGAATTATAGTGAAGCACTACAGATGTGTGTT TGTCAAGGAGACTATTTGAGAGCCCTTGATGAAAAAACTAACAGAAATGC ACCATGTTACAGTAAGAAAATTAATAAAATTATTTTATTCATTTTTGTTT GTCCTGACATTGACTTTTGAACTCTGCTATGTTAATTGAAATAACTCAAT TTGAAACATCCAACATAGCTTTATAACTGTGTCATTTATTTAATTATAGT CACACATGTCTGGAAGCCTATTTTCAGCATTTCTTGTTTAAGCTAGCGAT TTCAAACTAACTCCCGCAGAGCATTTATTAGGAGAGATATTAACACGTCA AAAAATTTATTGGAAAATAGAGAAAAAAGCAGTATTACTCGCCAGTACTT CAACGTACAAAAAACTACTCTTGGTGGTGGGCTATATGGGAAAAAAGTGT GTTTTCAGTTGGAACTCTCTCGCTGTTTGACTTTCGCAAAATAATCATGG AAGTGTATATTTTTAGAAAAACCTGTCATGCTGTTCTCCAAAGACATTTA CATTCTAAATAACAAGAACACAAGCGTTACTATACAGATGCTTGATTACG GTCCATCAACAACGTACATTATCAATTTACCACACAATGTAAGGAAAGTA GCAAACAAACCAATTTTCAAAATCGATCATCTTCGTCCAAATAGTCAATA CAACATCACAATTGAAGTTCAGAACGATGTGCTGAGCGCGATTGGGGTTG AAATCAAAGTAACAAAATCATTTTGGACCAATGTCAAAAGTAAGTAGTCA TATTCCAAAAAATAATTGAATACTATTTTAATCTTGATAAATTAAAAAAG CAATATAGCTTCCATTAATGTTTTAAAAAGTTTCAACAGTTTGCAACAAA ACATTTTTATGTTTCATTATTCAAAAATTATCCCATCTTAGAACCTGGAG CAGTGAAGAATATTCGACTTGAACGTGAGACAATATTGATTTGGGATCCA ATAACTGATGCTGGGCCAGTTGAATATGTCATCGAGATGCAGAATGAAAC CTTAACTACACCAAATAATTTTCATTCTTTGGAAAATAATATGAAATTTG TTTCTGGAAAGGTACGTTTTCATATGCGTATGTCATCATCCTCTAGAAAT TCTCCTAAACTTTCGATCTAAAAATTTTCGTTGTCCATGGTTAATGCTTT ATTCTATAAAGATTATTTGCAGTTAAGTCTCCCTAATTCGGTAATTCGAA TCTCTATCACTCGAATGTTTCTATAATGGGCTTTTCCAGAAAAAAACCGT ATACCCCCTGTTGAGGAGGTCCATCCCCCTGTGGCTGGAAATGCTGTAAC CCCCTGGAATTCCAGGCAATTTCAGGTTTAAACCCCTCTGGAATTCTGAA TTTTAATAGGATTTAAAAAGCTACCCCCATGGAATTCCAGTTATTTTTGA CCGATTTTTGTATCTCCTTATGGAATTCCGCCACATATCAAACCTTACCC CCTTGGAACGGAAATGGACGAGGGTATACGGTTTTTTTCTAAAAAAGCCC AATTCGAGCTAAAATATTGGTCCCCTCAGCATGAAAGTGGTTTAAATGTA ATTCGAGTTTTAGTCCCTCGAAGATCGAATAAGAGAGTGTACTGAAAACT TAAATAACATAAGACCATTTCTAAGAGCACATTGAAGCTTAAACTCAAAA TCAACTCCACACCTTTTTTCTAATAGATTCATGCTGAAGTCAATGGTCCA ACAGGCAAAATTAAAGGCTATCCAATTGCTTTTACCTTCACACCAACCAC ACCGAAAGAAAAAAATGATTTTCATTTAATTATTGGAGGTTCCGTTGGAG GGTTCTTGTTGATTTTGATCATCCTAATGATTGCATTGCTGGTCAAAAAG CATCGAAAACCAGCACAATTTGAAGTGACAAGAATGGAAGATGGAACAAG TAAGATATTCTAATGGACTATGTTTGATACAATTTGTAGATACCTTAAGG GAACTTATTTTGCCGGGAACTAATCTTGGCGAACTCGGCAAATTTAGACA ACATTCGCCAAAAGTGGTTCCCGCCAAAATTAAATATTTCGCTCACTCGC TAAAATAAGTTCTCGCAAAAATTAAATTTTTTTGGTATTTTGCCTAAACA ACTTCTTGAGTTCACAAAAACGCTTCAAATAAGGCAAAATAGAACAGATT TACACTGTCATTCGCCAAAATTTGTTCCCGCTAAAATTAAAGAAATTCAT CAATCGCAAAAATTTGAAAATTTTAAGGATTTTTGCCACTCGTCAAAATT AGTTCCCGCCAAAATAAGTTCCCTTAAGGTAATTGAGTTTTTTTTTTAGA ATANCAAAATTAGTTCCCGCCAAAATAAGTTTCCTTAAGGTAATTGAGTT GTTTTTTTTTAGAATGTAAGTAATTGCCTTATGAGTAAGCAACAGCCTTG GTAATAGGAACAACGAACTTGTTTTGACTTTCCTTCAAAAGTATTTATGA AATAAGGTAAGAAAAGTAATAGAAAATACAACCTATGCCAGAAAAACCTC CCAAATTAAATTGTCTTTTATTTTAGTGACTATTCCCCGAATGACATTAT TCAAAACAAGTCGACTATACGTCGATCCCACAACTTACTCACATGTGGAT GAAGCTGTCGAAGAATTTGCGTTGGAACTTGACCGAAGCTGCTTGACTAT GGACCAACTTATTGGAGGTGGTGAATTTGCAAATGTCTTCAAAGGAATCT TGAGTACTGAGAGCAGAAACAGTGACGTTGCAATCAAAGTTCTAAAGGTA ATACAATCGAGTCTCAATAATTCAAACCTCTATTACTCGAATGACTATTT AACTCGAATGAGTTTTCTGGTCCCCAAAATTGATAATGCCTGAAAAACCT TACTCTACACAGCTCTACAACTCGAAATTTCCTTAATTCGAATAAATTTG ATATATGCACAAGTATAAAAAATCTTGGGAAAACTTAAGCATTCTTTGAA TGTACGAGTCTCTTTATGATATTTCAAAACAAAAGCCTTCCATATTACAA TAAGGCGTGTATCTAGCGCATTACATGAGCATGGAATAAACATATTACTT ATCTTACTTAAGATGTATTTGCTAAGAATAATGGGCTAAAAAAATATTCT CCAAAAGCTTATTTAAAAAAACGTGTAGTTCTTGTAGTGTGGTTTTAAGA AAAGGAAGCCATAATTTTACTTCCAAAGTATAGAAGACATAACGAATGAA CTAGTTGTTTACCTTTTGATACAATTTTTCGTCTAACACATAATTTCTTC ATTTCCATCAGAGTGGAGCAAACCGTAGTGATCGTGATGATTTCTTAAGT GAAGCTGCCATCCTCGGACAATTCTCCGATCCCAATGTTGTATCTATAGA AGGCGTCGTTCTAAAAGGTAAAATTTTTTCACTATTGTGGAAAATATGTG TGAACATTTGCTAGCAATTGTATTTAAATTCTCAGCTGGCACACAACGTT GTTTCAACACCCATCTAACGTTATGTTGACGTTGTGAACGTTAGATAAAC GTTAAAAGAACGTTGTGTGCCAGCTGGATAGATTTACCAAGAGTGCTCAG TGATGGTACAATACATTTACAGTCATAATAGGGCTTAAGAAAAATGCAAG TGAATCGATTCGGGGTGGAGCACAGATTTATGACGTTATTGGCTTTTTTT TTTTGCATCGGTGCTTCAAAGATGAAGAAAAAGTAATGTTATTTCGGTGT CAAAGCATGCCCTATGGCGACAAATTATGGGTTTTTGGTCGTTGTTGACA GTGACCAAGAAAAATGCGTCAATCCCCCCCCCCACCCCAATATAGTACCA ATTCAGTAGCCTTGAAACCAGAGCAATTCGCATATATTTCTTTATGGACG TGGTACGAAGAATCTCCGGTTTTCTCATAAGGCATTTCGTATGTGCTTTA ACTCAGTTGTTACTTTTTAAATCTTATACAACAAACATATATCTACTTTT ACTCAACACTGATTTGCAATTTATTCTCCAGATTACCCAAGTCTGATTGT ATTGGAATATATGGCAAACGGATCTCTGGACAAGTACCTGGTGGTAAGTG ATTCAATAATTATGATCACCCTTTTTGGGAAATANATCGTGATGATTTCT TAAGTGAAGCTGCCATCCTCGGACAATTCTCCGATCCCAATGTTGTATCT ATAGAAGGCGTCGTTCTAAAAGGTAAAATTTTTTCACTATTGTGGAAAAT ATGTGTGAACATTTGCTAGCAATTGTATTTAAATTCTCAGCTGGCACACA ACGTTGTTTCAACACCCATCTAACGTTATGTTGACGTTGTGAACGTTAGA TAAACGTTAAAAGAACGTTGTGTGCCAGCTGGATAGATTTACCAAGAGTG CTCAGTGATGGTACAATACATTTACAGTCATAATAGGGCTTAAGAAAAAT GCAAGTGAATCGATTCGGGGTGGAGCACAGATTTATGACGTTATTGGCTT TTTTTTTTTGCATCGGTGCTTCAAAGATGAAGAAAAAGTAATGTTATTTC GGTGTCAAAGCATGCCCTATGGCGACAAATTATGGGTTTTTGGTCGTTGT TGACAGTGACCAAGAAAAATGCGTCAATACCCCCCCCCCACCCCAATATA GTACCAATTCAGTAACCTTGAAACCAGAGCAATTTGCATATATTTCTTTA TGGACTTGGTACGAACAATCTCCGGTTTTCTCATAAGGCATTTCGTATGT GCTTTAACTCAGTTGTTACTTTTTTTGTAAATCTTATACAACAAACATAT ATCTACTTTTACTCAACACTGATTCGCAATTTATTCTCCAGATTACCCAA GTTTGATTGTATTGGAATATATGGCAAACGGATCTCTGGACAAGTACCTG GTGGTGAGTGATTCAATAATTATGATCACCCTTATTGGGAAATCGTCATT ACAATTTTCAAGAAAAAAGCCATAGGTATTTTGTGGATTTCATCATGGTC CCCTATTTCCTTCCTCTTTTTTTACTAACACCAACGTTTAAGTAGAAGAA TAGCTAAATAATCCAATAGCTATAAACTTTTAATGAAGTTTGGTACAAAA TTAAAAAAAAATCCCAATTCTCTACCAAAAGGATTAAGTTAGCTGGCATC AGGAAATAATTATTTATTCTTCTATTTTTCTATCTTAGAAAAATGATTCA CAATTCAGTGTAGCCAAATTATTGGGTATGGCACGTGGTGTTGCATCAGG GATGAAATATCTGTCAGACCTTGGATTCATACACAGGGTAAGTGAAATTA AATTGATCCTACTTTACTCGGATTAAATTTGGCGAGTAAAAAAAATCGCG AAATTTTCTGGATTTAATTTCGCGAGTCAGAGTTCAAAAAAATTTTGCGT GGATTAAATTTCGCGAGTAAGCCTGAAAACAGCTGAAAAATAGCCATTTT TGCCAAAAATGGAGACTTTGGACTGGTTTCTCCTCAGAAAATGCGATTTT AAAAGCTGGTGGATTTAGCCACGATAAACTTCCAACCATGAATAGGGTCG ATAAACTTATTTAGATTAATCAAACGTTGTATGGATGTTATAGAAAGCGG GTATTCTTTTAAAATTTATGCCAGCATTGAAATGACTTCCAGAGCTAAGC ATCNGTAAGCCTGAAAACAGCTGAAAAATAGCCATTTTTGCCAAAAATGG AAAATTTGTACTGGTTTCTCCTCAGAAAATGCGATTTTTAAAGCTGGTGG ATTTAGCCACGATAAACTTCCAACCATGAATAGGGTCGATAAACTTATTT AGATTAATCAAACGTTGTATGGAAGTTATAGTTATTAGAAAGCGGGTATT CTTTTAAAATTTATGCCAGCATTGAAATGACTTTCAGAGCTAAGCATGGT ACATCACTACATTAAAGAGAAACATAACACCGCAAAATGGATGGCTTTTG AGCTTATTAGCCTGGACGTACGATAAAGTCCTAAGGTTTCTTCAAAATTT GATCAAAGATTTGCTAAAAGATCTTTCGTGCGTGCCGCCATAAATGGCAA ATGAAACCTATTTCTGATAATTTAAGGTCACTCGAAATCATTTTATGGCT TTAAGAATCATGTCAAAAGACAAACGAAACGAAACGAAAAAGAAAGCAAA ACTAAATTTCTTCTTTTCCATTTCTTTGACAGGACTTGGCAGCAAGAAAT GTTTTAGTGAACAGTGAAGATTGCTGTAAGATTGCAGATTTTGGCATGAG TCGTGAACTGAAAACAGATGATACCTATGATACAAAGGTAACAAAATTTC TGTGTTTTTTTTTCTGTAAACAAGTTGCCAGTATTCTTGGTAAGTGCCAC ATTACAATGTCTTCTTACATTACGGAACTAACAGCTGATTGTTTGTAAGT GGCGTAAAATCAGTCAATATGTCACTTGCAACCAATCAGCTGTTGGATCC GTGGAAGACATTGCAATGATGCATATCATGGATTAAGGAAATGCACTACT AGTATCTCTTCTGATATTACGCAGGTTGATGTGCTTAGATTTTTGAGCAA ATTTAAAAAAGATTAATAGATTAGAGAGATTGAAGAGAGATATCTTGATT TTAAGTTCATTCTCTTGTTTTTCAGGGTGGAAAGATCCCGATAAAATGGA CAGCACCCGAAGCTATCGAATACAAAAAGTTCACCACAGCCTCTGATGTG TGGTCTTACGGTATCGTATGCTGGGAAATCTTCTCTTATGGTGAAAGACC TTACTGGGAATGGAGCAATTACGAGGTAGGTTTCAAGGACAGGGCAGAAT AGTACCATTAAAGATTCCACTGTCTCTTTCGAAATCCTAATGGAGATGGA AATTATATTGTTTCAAGAATTTTTTATCCAGTTGAGATCTTTATGGAGTG AAATATTTTCCATGCACTTTTGAATGGGGATAAAATCAACTGTCCAGTGG GGCTAAAATTGTAGCGGATTTCTTCCACCGGAAATGAAATTTCGGACAAA TTTTACGAGGGTGTCTAAAGATTAATGCCTCATAGGATGACCCTAATCAA ATTTAAATGTATTTGATATATTGGCTGGGTCAAAGGCCATCTGAAGGCAA ACATTTGAAGGAAAAAAAGTCCGGTGTCCACTTTCGCGCGAAGCGCGCGA AACTTTTCACGTTATTTGTAACGTCATTGGTTGATTGGTTGATTAAAAAA AGAAGCAATTCCATTGGTCAAAATTGACGTAACGGTTGAAAAAAGTTGAA CTTCCTTCAACTTTTTTTTTATTCGCGCGAAACTTTTTTATGACGTAATC TTTTCTTCAGGCAAAAACGGCTAAGAAAAAATCTTTCGCGCGCTTCGCAC GAAAGTGGACACCGGCCTTGAAAAACCATAAATCCCTTTAAAAACCCATT AGAAAAGTGAAGTAGAAATCATCTTCTAAAGAAAAAATTCAATGAGCTAA TAATTTATTTTTATTTTTTTGAAGGTTATGGAAAGACTTTCGACTGGCTA TCGGTTACCTCCACCAATGGTAAGAAAAGAAATTTTAAATCTTTGTAATT TTGTAGAACTTATTAAACTATTGATATTAAGAAAGAAATAAGAAAGTTAA AAGATTAACCGTGATATTTTAGGAGAAAAGCTACGATCTTTGAATAATAA TTCACGGTAAAAGACTTCTCATACGATGCAGATTTCAATCGAACCCAAAA GTCTATCTTTTATTCATCAAATCATTAACCAACACCTCTTTCTTCATAGG AATGTCCTAAAGGAATCCATGATCTGATGTTACAATGTTGGCACAAAGAT CGTTTGAAGAGACCACGTTTCTCCAATATTCTACAGAAAGTGGAAGAATG GTTGAAGAATCCTGATCGACTGACTGATATCGCATCTGTTATTACCAAAA GGTGAGGTTCTTTTCTCATCTGCAATGGGCTTTCCCAGAGAGGGGGTGGA GGATATAACATTTTTTTGGAAATTTACCCCCCCCCCCAGACATTGTGACC TTTAAAACCCTGGACAGCATGTCTACTCCCCTCTCCGGACAAGCATTAGT TGACCCCCTGGACACTTAAAATTATCCTCAAACAGAGTAAAATTACCCTC AAACAGAGCAAGTCCCCCGGACAAGGCAAATTTTGTAGATTTTTTACTAC CCCCGGGACACTATATCCTCCACCCCCATGTATGAACATTTTCTGGAAGC GCCCAATACTATTATTCTGAATCTAAGTTTAATGAAGGTCTTATGTTGAG GATTTCTATCTAAAGAGCAGGGGAGGCAGATTCTTGTCTTTCTTGGTAAA ATCATGGTCAGTTTATGCATTTCTGTGCATTTTAGCGTTTAGCAGATTTT AAAGTTCGGGCGAGAATGACATTTTCAGGCTTTCTACTTTATCTAATCGG ATATTTCGATTTGGGAGGAGTGTAATGGCTTTTAGGCTATATTCTGCGTA GTCAGACCATTCACAAGCTTTTAGATCCTCAGATCCTAAGATAACTCTTA GGTCTCGTGTTAAACTCAGAGTTAAAACTCTACTTTCAAACCCTAAGTTA AGAAGGCACTTAAAAACTAATTGCGATTTTAAAAATTTTGCACGGAAATT CCTTTTGTGCCAAATATTATCGCCATAGTTGCCATTAATGGTCTCTAGCT AAATTTTCAAAGGGAATTGAGTTTCTTATTGACGGTGACGTTCGATCTCT ACCTGAAGACTCCGATGACTAGCTACCATGGAAACTATTTTAACTTGACA AATAATCAGCCTCTTCTTCTTCTTCTTCTTCTTCCCAATCGAGAAATTCA CTTCAATCTCTGTATACTCCTCAGTTAAACGAACGATTTTTTACCCATAT CCAAAGTACATTCATCTTACCAGCGAGACTAAAATGACTCTAGAAACGTT TCTGAAATTACAAAAAGAATTATATCAATATCTCTCTTTTCTATCATTTT AATAGGGACGAAAATTTGGATTATTCAGTACTGGATGATTTAGCAAGCTG GTTAGAAGCAATAAATATGAAACAATATTTGAAAATGTTTACCGAGAGTG GTTATATGACACCCAAAGATATTCTCTATTTGACCAATGAAGATCTAGAA TCGCTTGGTGTTGGTTTGATTGGACATCGCAAGAAACTGTTGAAAGCAAT TAAAAACACCAAAAACCAGGTAAGGTCTTAAAATTATAACATTACCTTGT ATCAGTGAAAGGGTTGCCTAGGATATCTCCTTGTGACCAAAAACAAACCA ATCACTATAAAGGATGAAAATTAAAAACTTTTTTGATGAATCTAGCAAAG CTTAAATCTCTTCACCTTCAATGTTAAACATTTTCTTGAAATAATCGAAA TCAATATTCTTCCAATCATGATCTATCTTTTCAGAATTCTGAATTCAGAA TTTTTTGAGCAATCACCAATTATCAATTCCATTTTCTTTTCCTTCTTCAG ACTGAAAGCACCAACAAATCAGATACTGACAGCAAAGCATCCAAAGTGAG TCGAACCAGTAGTTTCGCAGGATTCGGGAGCTCTCTGAGCAAAAAAGTCT CATTTCTGGCAAGTCCTAATTCATCAATATCCTTTAAGAAGACAGTCGGA AAACGAACGTCACTCGGATATCAATTGCAATGATTCTGATTGGCTAGATA TTAAGCAGTAGTGAATCTGATTGGATGAATAACGAGAAGTAGCGAATCTG ATTGGATGAATATCAAGAAGTAGTGAATCTGATTGGATGATTATCAAGAA GTAGTGAATCTGATTGGATGAATATCAAGAAGTAGCGAATCTGATTGGAT GAATATCAAGAAGTAGTGAATCTGATTGGATGAGTATCAAGAAGTAGTGA ATCTGATTGAATGAATATCAAGAAGTAGCGAATCTGATTAGACGATTATC AAGAAGTAGTGAATCTGATTGGTTGGATAAAGAGCAGTGGATCTGATTGG ATAAATATCAAGCAGTAGTGAATCTGATTGGTTGGATACAAAGCAGTGCA GTGGAAATCTGATTGGTTAAAAATCGACAATAAGCTATGAATCTGATGGT TGAATGTTAAAAAAAATGCAGGAATAATGAAGATAACTAATCTGGATGAA TGAATATAAACAAAAAGTCACGACTCTGATAGGGAGATAATTTACAAAAG ATATGAATGAATGAACAATGGATAATCAACAGATATTGGGTGAACAATAA ACTTCGAGAATGATTGGTTGATAACAAACAATGGACAGTGTTAATTGATG ACGTTCACGAAAGAACCAAAGTCTCATGATGAACTAATGAAATTTTTTAG CTAAAATGCATGCATGTATGAATAACAATTAACCTAATCATAGAAAGCGT ATAACATATATGAGAACGATGTTGCATGTGATCAAAGTCATTTCGTAATC GAATTCTTTTTTTGGCGATTGACAACTGTTGGTAGATCCTGAATCAAAAT AGATAAAAATGCAGATAGTTGTTCCTATCAACAAAACAAAAAAGCTAGAA ATCTTTATTTTATAAATGATATGCACCAACTGTATGACTGTATTTCTTTC TTTACGTCACTTGCAACAAATCAGCTGTTTTGAATAAAGTTAGGAGACAT TGCAGGGGTGCATTTCTTAAATTAACGGTTTACGAAAAAGTACAAATGTA TGAGCTTCAACATCAAATCTTCACGAACAGTTTTTTTTGTGACGAAACTG ATATAATTTTTTCAATTTTAACAAAGGAAGGGTCAACTCAATAAGTTAAA TTTTATTTGTAAATATTTTTACCACGCAAATCTTTTTTTTTTGAAAATAA CTAACGGATGAAATGAAACACACGACTCATTTTATAAATCAATTTTTTAT GTTTTTACTATATTTTTTTATATTTTGTACATAAATCCTTTTATAACTTT TGAGAATTTTTTACAGTGCTATTTATGAAAACAAACATTTATATTATAAC TCTACATAAATCTTGTGCTTCGATATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000336XLOC_000336Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000566-exon-sc0000002-1575043694:747362..748372TCONS_00000566-exon-sc0000002-1575043694:747362..748372Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:746684..746956TCONS_00000566-exon-sc0000002-1575043694:746684..746956Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:746362..746531TCONS_00000566-exon-sc0000002-1575043694:746362..746531Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:745524..745746TCONS_00000566-exon-sc0000002-1575043694:745524..745746Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:744676..744896TCONS_00000566-exon-sc0000002-1575043694:744676..744896Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:744056..744161TCONS_00000566-exon-sc0000002-1575043694:744056..744161Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:743380..743441TCONS_00000566-exon-sc0000002-1575043694:743380..743441Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:742186..742284TCONS_00000566-exon-sc0000002-1575043694:742186..742284Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:741186..741290TCONS_00000566-exon-sc0000002-1575043694:741186..741290Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:740698..740847TCONS_00000566-exon-sc0000002-1575043694:740698..740847Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:739954..739998TCONS_00000566-exon-sc0000002-1575043694:739954..739998Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:739572..739723TCONS_00000566-exon-sc0000002-1575043694:739572..739723Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:738304..738517TCONS_00000566-exon-sc0000002-1575043694:738304..738517Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1575043694:736495..738022TCONS_00000566-exon-sc0000002-1575043694:736495..738022Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:747362..748372TCONS_00000566-exon-sc0000002-1510915933:747362..748372Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:746684..746956TCONS_00000566-exon-sc0000002-1510915933:746684..746956Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:746362..746531TCONS_00000566-exon-sc0000002-1510915933:746362..746531Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:745524..745746TCONS_00000566-exon-sc0000002-1510915933:745524..745746Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:744676..744896TCONS_00000566-exon-sc0000002-1510915933:744676..744896Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:744056..744161TCONS_00000566-exon-sc0000002-1510915933:744056..744161Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:743380..743441TCONS_00000566-exon-sc0000002-1510915933:743380..743441Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:742186..742284TCONS_00000566-exon-sc0000002-1510915933:742186..742284Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:741186..741290TCONS_00000566-exon-sc0000002-1510915933:741186..741290Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:740698..740847TCONS_00000566-exon-sc0000002-1510915933:740698..740847Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:739954..739998TCONS_00000566-exon-sc0000002-1510915933:739954..739998Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:739572..739723TCONS_00000566-exon-sc0000002-1510915933:739572..739723Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:738304..738517TCONS_00000566-exon-sc0000002-1510915933:738304..738517Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1510915933:736495..738022TCONS_00000566-exon-sc0000002-1510915933:736495..738022Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:747362..748372TCONS_00000566-exon-sc0000002-1491911889:747362..748372Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:746684..746956TCONS_00000566-exon-sc0000002-1491911889:746684..746956Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:746362..746531TCONS_00000566-exon-sc0000002-1491911889:746362..746531Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:745524..745746TCONS_00000566-exon-sc0000002-1491911889:745524..745746Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:744676..744896TCONS_00000566-exon-sc0000002-1491911889:744676..744896Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:744056..744161TCONS_00000566-exon-sc0000002-1491911889:744056..744161Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:743380..743441TCONS_00000566-exon-sc0000002-1491911889:743380..743441Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:742186..742284TCONS_00000566-exon-sc0000002-1491911889:742186..742284Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:741186..741290TCONS_00000566-exon-sc0000002-1491911889:741186..741290Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:740698..740847TCONS_00000566-exon-sc0000002-1491911889:740698..740847Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:739954..739998TCONS_00000566-exon-sc0000002-1491911889:739954..739998Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:739572..739723TCONS_00000566-exon-sc0000002-1491911889:739572..739723Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:738304..738517TCONS_00000566-exon-sc0000002-1491911889:738304..738517Clytia hemisphaericaexon
TCONS_00000566-exon-sc0000002-1491911889:736495..738022TCONS_00000566-exon-sc0000002-1491911889:736495..738022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:736495..748372 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.220917 0 0.142908 3.52229 2.45516 0 0.662273 4.83138 4.86723 3.06342 4.86428 3.29438 5.0191 0 2.82831e-10 5.8207e-09 0 0 6.70305e-07 0.132248 0.156448 0.158486 0.182684 0.284534 0.237557 0 1.04587e-05 0.0664199 0.0725041
Blast
BLAST of TCONS_00000566 vs. Swiss-Prot (Human)
Match: EPHA7 (Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 PE=1 SV=3)

HSP 1 Score: 411.764 bits (1057), Expect = 7.633e-123
Identity = 188/386 (48.70%), Postives = 271/386 (70.21%), Query Frame = 3
Query: 1701 FKTSRLYVDPTTYSHVDEAVEEFALELDRSCLTMDQLIGGGEFANVFKGILSTES-RNSDVAIKVLKSGANRSDRDDFLSEAAILGQFSDPNVVSIEGVVLKDYPSLIVLEYMANGSLDKYLVKNDSQFSVAKLLGMARGVASGMKYLSDLGFIHRDLAARNVLVNSEDCCKIADFGMSRELKTD--DTYDTKGGKIPIKWTAPEAIEYKKFTTASDVWSYGIVCWEIFSYGERPYWEWSNYEVMERLSTGYRLPPPMECPKGIHDLMLQCWHKDRLKRPRFSNILQKVEEWLKNPDRLTDIASVITK-----RDENL-DYSVLDDLASWLEAINMKQYLKMFTESGYMTPKDILYLTNEDLESLGVGLIGHRKKLLKAIKNTKNQ 2831
            F  ++ Y+DP TY   + AV +FA ELD SC+ ++++IG GEF  V  G L     R+  VAIK LK G     R DFL EA+I+GQF  PNVV +EGVV +  P +IV+E+M NG+LD +L K+D QF+V +L+GM RG+A+GM+YL+D+G++HRDLAARN+LVNS   CK++DFG+SR ++ D    Y T GGKIP++WTAPEAI+Y+KFT+ASDVWSYGIV WE+ SYGERPYW+ SN +V++ +  GYRLP PM+CP G+H LML CW K+R +RP+F  I+  +++ ++NP+ L       ++      D+N  D++    +  WL+AI M++Y   FT +GY + + +  +T ED+ SLG+ L+GH+KK++ +I+  + Q
Sbjct:  602 FPGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNPNSLKTPLGTCSRPISPLLDQNTPDFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMRAQ 987          
The following BLAST results are available for this feature:
BLAST of TCONS_00000566 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EPHA77.633e-12348.70Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 ... [more]
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