TCONS_00000565 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000565
Unique NameTCONS_00000565
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2434

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000565 ID=TCONS_00000565|Name=TCONS_00000565|organism=Clytia hemisphaerica|type=transcript|length=2434bp
GATTTCTTAAGTGAAGCTGCCATCCTCGGACAATTCTCCGATCCCAATGT
TGTATCTATAGAAGGCGTCGTTCTAAAAGATTACCCAAGTTTGATTGTAT
TGGAATATATGGCAAACGGATCTCTGGACAAGTACCTGGTGAAAAATGAT
TCACAATTCAGTGTAGCCAAATTATTGGGTATGGCACGTGGTGTTGCATC
AGGGATGAAATATCTGTCAGACCTTGGATTCATACACAGGGACTTGGCAG
CAAGAAATGTTTTAGTGAACAGTGAAGATTGCTGTAAGATTGCAGATTTT
GGCATGAGTCGTGAACTGAAAACAGATGATACCTATGATACAAAGGGTGG
AAAGATCCCGATAAAATGGACAGCACCCGAAGCTATCGAATACAAAAAGT
TCACCACAGCCTCTGATGTGTGGTCTTACGGTATCGTATGCTGGGAAATC
TTCTCTTATGGTGAAAGACCTTACTGGGAATGGAGCAATTACGAGgtTAT
GGAAAGACTTTCGACTGGCTATCGGTTACCTCCACCAATgGAATGTCCTA
AAGGAATCCATGATCTGATGTTACAATGTTGGCACAAAGATCGTTTGAAG
AGACCACGTTTCTCCAATATTCTACAGAAAGTGGAAGAATGGTTGAAGAA
TCCTGATCGACTGACTGATATCGCATCTGTTATTACCAAAAGGGACGAAA
ATTTGGATTATTCAGTACTGGATGATTTAGCAAGCTGGTTAGAAGCAATA
AATatgaaacaatatttgaaaatgtttaccgAGAGTGGTTATATGACACC
CAAAGATATTCTCTATTTGACCAATGAAGATCTAGAATCGCTTGGTGTTG
GTTTGATTGGACATCGCAAGAAACTGTTGAAAGCaattaaaaacaccaaa
aaccagACTGAAAGCACCAACAAATCAGATACTGACAGCAAAGCATCCAA
AGTGAGTCGAACCAGTAGTTTCGCAGGATTCGGGAGCTCTCTGAGCAAAA
AAGTCTCATTTCTGGCAAGTCCTAATTCATCAATATCCTTTAAGAAGACA
GTCGGAAAACGAACGTCACTCGGATATCAATTGCAATGATTCTGATTGGC
TAGATATTAAGCAGTAgtgaatctgattggatgaataacGAGAAGTAgcg
aatctgattggatgaatatcAAGAAGTAgtgaatctgattggatgattaT
CAAGAAGTAgtgaatctgattggatgaatatcAAGAAGTAgcgaatctga
ttggatgaatatcAAGAAGTAgtgaatctgattggatgagtATCAAGAAG
TAGTGAATCTGATTGAATGAATATCAAGAAGTAGCGAATCTGATTAGACG
ATTATCAAGAAGTagtgaatctgattggttggaTAAAGAGCAGTGGATCT
GATTGGATAAATATCAAGCAGTagtgaatctgattggttggaTACAAAGC
AGTGCAGTggaaatctgattggttaaaaatcGACAATAAGCTATGAATCT
GATGGttgaatgttaaaaaaaatgcaGGAATAATGAAGATAACTAATCTG
GATGAATGAATATAAACAAAAAGTCACGACTCTGATAGGGAGATAATTTA
CAAAAGATATGAATGAATGAACAATGGATAATCAACAGATATTGGGTGAA
CAATAAACTTCGAGAATGATTGGTTGATAACAAACAATGGACAGTGTTAA
TTGATGACGTTCACGAAAGAACCAAAGTCTCATGATGAACTAATGAaatt
ttttagctaaaatgcATGCATGTATGAATAACAATTAACCTAATCATAGA
AAGCGTATAACATATATGAGAACGATGTTGCATGTGATCAAAGTCATTTC
GTAATCGAATTCTTTTTTTGGCGATTGACAACTGTTGGTAGATCCTGAat
caaaatagataaaaatgcaGATAGTTGTTCctatcaacaaaacaaaaaag
ctagaaatctttattttataaatgaTATGCACCAACTGTATGACTGTATT
TCTTTctttacgtcacttgcaacaAATCAGCTGTTTTGAATAAAGTTAGG
AGACATTGCAGGGGTGCATTTCTTAAATTAACGGTTTACGAAAAAGTACA
AATGTATGAGCTTCAACATCAAATCTTCACGAACAGTTTTTTTTGTGACG
AAACTgatataattttttcaattttaacaaaGGAAGGGTCAACTCAATAA
Gttaaattttatttgtaaatatttttaccacgcaaatcttttttttttga
aaataactaaCGGATGAAATGAAACACACGACTCATTttataaatcaatt
ttttatgtttttactatatttttttatattttgtacataaatccttttat
aacttttgagaattttttacaGTGCTATTTATGAAAACAAACATTTATAT
TATAACTCTACATAAATCTTGTGCTTCGATATCG
Run BLAST on NCBI

transcript from alignment at sc0000002:736495..743329-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000565 ID=TCONS_00000565|Name=TCONS_00000565|organism=Clytia hemisphaerica|type=transcript|length=6835bp|location=Sequence derived from alignment at sc0000002:736495..743329- (Clytia hemisphaerica)
GATTTCTTAAGTGAAGCTGCCATCCTCGGACAATTCTCCGATCCCAATGT
TGTATCTATAGAAGGCGTCGTTCTAAAAGGTAAAATTTTTTCACTATTGT
GGAAAATATGTGTGAACATTTGCTAGCAATTGTATTTAAATTCTCAGCTG
GCACACAACGTTGTTTCAACACCCATCTAACGTTATGTTGACGTTGTGAA
CGTTAGATAAACGTTAAAAGAACGTTGTGTGCCAGCTGGATAGATTTACC
AAGAGTGCTCAGTGATGGTACAATACATTTACAGTCATAATAGGGCTTAA
GAAAAATGCAAGTGAATCGATTCGGGGTGGAGCACAGATTTATGACGTTA
TTGGCTTTTTTTTTTTGCATCGGTGCTTCAAAGATGAAGAAAAAGTAATG
TTATTTCGGTGTCAAAGCATGCCCTATGGCGACAAATTATGGGTTTTTGG
TCGTTGTTGACAGTGACCAAGAAAAATGCGTCAATACCCCCCCCCCACCC
CAATATAGTACCAATTCAGTAACCTTGAAACCAGAGCAATTTGCATATAT
TTCTTTATGGACTTGGTACGAACAATCTCCGGTTTTCTCATAAGGCATTT
CGTATGTGCTTTAACTCAGTTGTTACTTTTTTTGTAAATCTTATACAACA
AACATATATCTACTTTTACTCAACACTGATTCGCAATTTATTCTCCAGAT
TACCCAAGTTTGATTGTATTGGAATATATGGCAAACGGATCTCTGGACAA
GTACCTGGTGGTGAGTGATTCAATAATTATGATCACCCTTATTGGGAAAT
CGTCATTACAATTTTCAAGAAAAAAGCCATAGGTATTTTGTGGATTTCAT
CATGGTCCCCTATTTCCTTCCTCTTTTTTTACTAACACCAACGTTTAAGT
AGAAGAATAGCTAAATAATCCAATAGCTATAAACTTTTAATGAAGTTTGG
TACAAAATTAAAAAAAAATCCCAATTCTCTACCAAAAGGATTAAGTTAGC
TGGCATCAGGAAATAATTATTTATTCTTCTATTTTTCTATCTTAGAAAAA
TGATTCACAATTCAGTGTAGCCAAATTATTGGGTATGGCACGTGGTGTTG
CATCAGGGATGAAATATCTGTCAGACCTTGGATTCATACACAGGGTAAGT
GAAATTAAATTGATCCTACTTTACTCGGATTAAATTTGGCGAGTAAAAAA
AATCGCGAAATTTTCTGGATTTAATTTCGCGAGTCAGAGTTCAAAAAAAT
TTTGCGTGGATTAAATTTCGCGAGTAAGCCTGAAAACAGCTGAAAAATAG
CCATTTTTGCCAAAAATGGAGACTTTGGACTGGTTTCTCCTCAGAAAATG
CGATTTTAAAAGCTGGTGGATTTAGCCACGATAAACTTCCAACCATGAAT
AGGGTCGATAAACTTATTTAGATTAATCAAACGTTGTATGGATGTTATAG
AAAGCGGGTATTCTTTTAAAATTTATGCCAGCATTGAAATGACTTCCAGA
GCTAAGCATCNGTAAGCCTGAAAACAGCTGAAAAATAGCCATTTTTGCCA
AAAATGGAAAATTTGTACTGGTTTCTCCTCAGAAAATGCGATTTTTAAAG
CTGGTGGATTTAGCCACGATAAACTTCCAACCATGAATAGGGTCGATAAA
CTTATTTAGATTAATCAAACGTTGTATGGAAGTTATAGTTATTAGAAAGC
GGGTATTCTTTTAAAATTTATGCCAGCATTGAAATGACTTTCAGAGCTAA
GCATGGTACATCACTACATTAAAGAGAAACATAACACCGCAAAATGGATG
GCTTTTGAGCTTATTAGCCTGGACGTACGATAAAGTCCTAAGGTTTCTTC
AAAATTTGATCAAAGATTTGCTAAAAGATCTTTCGTGCGTGCCGCCATAA
ATGGCAAATGAAACCTATTTCTGATAATTTAAGGTCACTCGAAATCATTT
TATGGCTTTAAGAATCATGTCAAAAGACAAACGAAACGAAACGAAAAAGA
AAGCAAAACTAAATTTCTTCTTTTCCATTTCTTTGACAGGACTTGGCAGC
AAGAAATGTTTTAGTGAACAGTGAAGATTGCTGTAAGATTGCAGATTTTG
GCATGAGTCGTGAACTGAAAACAGATGATACCTATGATACAAAGGTAACA
AAATTTCTGTGTTTTTTTTTCTGTAAACAAGTTGCCAGTATTCTTGGTAA
GTGCCACATTACAATGTCTTCTTACATTACGGAACTAACAGCTGATTGTT
TGTAAGTGGCGTAAAATCAGTCAATATGTCACTTGCAACCAATCAGCTGT
TGGATCCGTGGAAGACATTGCAATGATGCATATCATGGATTAAGGAAATG
CACTACTAGTATCTCTTCTGATATTACGCAGGTTGATGTGCTTAGATTTT
TGAGCAAATTTAAAAAAGATTAATAGATTAGAGAGATTGAAGAGAGATAT
CTTGATTTTAAGTTCATTCTCTTGTTTTTCAGGGTGGAAAGATCCCGATA
AAATGGACAGCACCCGAAGCTATCGAATACAAAAAGTTCACCACAGCCTC
TGATGTGTGGTCTTACGGTATCGTATGCTGGGAAATCTTCTCTTATGGTG
AAAGACCTTACTGGGAATGGAGCAATTACGAGGTAGGTTTCAAGGACAGG
GCAGAATAGTACCATTAAAGATTCCACTGTCTCTTTCGAAATCCTAATGG
AGATGGAAATTATATTGTTTCAAGAATTTTTTATCCAGTTGAGATCTTTA
TGGAGTGAAATATTTTCCATGCACTTTTGAATGGGGATAAAATCAACTGT
CCAGTGGGGCTAAAATTGTAGCGGATTTCTTCCACCGGAAATGAAATTTC
GGACAAATTTTACGAGGGTGTCTAAAGATTAATGCCTCATAGGATGACCC
TAATCAAATTTAAATGTATTTGATATATTGGCTGGGTCAAAGGCCATCTG
AAGGCAAACATTTGAAGGAAAAAAAGTCCGGTGTCCACTTTCGCGCGAAG
CGCGCGAAACTTTTCACGTTATTTGTAACGTCATTGGTTGATTGGTTGAT
TAAAAAAAGAAGCAATTCCATTGGTCAAAATTGACGTAACGGTTGAAAAA
AGTTGAACTTCCTTCAACTTTTTTTTTATTCGCGCGAAACTTTTTTATGA
CGTAATCTTTTCTTCAGGCAAAAACGGCTAAGAAAAAATCTTTCGCGCGC
TTCGCACGAAAGTGGACACCGGCCTTGAAAAACCATAAATCCCTTTAAAA
ACCCATTAGAAAAGTGAAGTAGAAATCATCTTCTAAAGAAAAAATTCAAT
GAGCTAATAATTTATTTTTATTTTTTTGAAGGTTATGGAAAGACTTTCGA
CTGGCTATCGGTTACCTCCACCAATGGTAAGAAAAGAAATTTTAAATCTT
TGTAATTTTGTAGAACTTATTAAACTATTGATATTAAGAAAGAAATAAGA
AAGTTAAAAGATTAACCGTGATATTTTAGGAGAAAAGCTACGATCTTTGA
ATAATAATTCACGGTAAAAGACTTCTCATACGATGCAGATTTCAATCGAA
CCCAAAAGTCTATCTTTTATTCATCAAATCATTAACCAACACCTCTTTCT
TCATAGGAATGTCCTAAAGGAATCCATGATCTGATGTTACAATGTTGGCA
CAAAGATCGTTTGAAGAGACCACGTTTCTCCAATATTCTACAGAAAGTGG
AAGAATGGTTGAAGAATCCTGATCGACTGACTGATATCGCATCTGTTATT
ACCAAAAGGTGAGGTTCTTTTCTCATCTGCAATGGGCTTTCCCAGAGAGG
GGGTGGAGGATATAACATTTTTTTGGAAATTTACCCCCCCCCCCAGACAT
TGTGACCTTTAAAACCCTGGACAGCATGTCTACTCCCCTCTCCGGACAAG
CATTAGTTGACCCCCTGGACACTTAAAATTATCCTCAAACAGAGTAAAAT
TACCCTCAAACAGAGCAAGTCCCCCGGACAAGGCAAATTTTGTAGATTTT
TTACTACCCCCGGGACACTATATCCTCCACCCCCATGTATGAACATTTTC
TGGAAGCGCCCAATACTATTATTCTGAATCTAAGTTTAATGAAGGTCTTA
TGTTGAGGATTTCTATCTAAAGAGCAGGGGAGGCAGATTCTTGTCTTTCT
TGGTAAAATCATGGTCAGTTTATGCATTTCTGTGCATTTTAGCGTTTAGC
AGATTTTAAAGTTCGGGCGAGAATGACATTTTCAGGCTTTCTACTTTATC
TAATCGGATATTTCGATTTGGGAGGAGTGTAATGGCTTTTAGGCTATATT
CTGCGTAGTCAGACCATTCACAAGCTTTTAGATCCTCAGATCCTAAGATA
ACTCTTAGGTCTCGTGTTAAACTCAGAGTTAAAACTCTACTTTCAAACCC
TAAGTTAAGAAGGCACTTAAAAACTAATTGCGATTTTAAAAATTTTGCAC
GGAAATTCCTTTTGTGCCAAATATTATCGCCATAGTTGCCATTAATGGTC
TCTAGCTAAATTTTCAAAGGGAATTGAGTTTCTTATTGACGGTGACGTTC
GATCTCTACCTGAAGACTCCGATGACTAGCTACCATGGAAACTATTTTAA
CTTGACAAATAATCAGCCTCTTCTTCTTCTTCTTCTTCTTCCCAATCGAG
AAATTCACTTCAATCTCTGTATACTCCTCAGTTAAACGAACGATTTTTTA
CCCATATCCAAAGTACATTCATCTTACCAGCGAGACTAAAATGACTCTAG
AAACGTTTCTGAAATTACAAAAAGAATTATATCAATATCTCTCTTTTCTA
TCATTTTAATAGGGACGAAAATTTGGATTATTCAGTACTGGATGATTTAG
CAAGCTGGTTAGAAGCAATAAATATGAAACAATATTTGAAAATGTTTACC
GAGAGTGGTTATATGACACCCAAAGATATTCTCTATTTGACCAATGAAGA
TCTAGAATCGCTTGGTGTTGGTTTGATTGGACATCGCAAGAAACTGTTGA
AAGCAATTAAAAACACCAAAAACCAGGTAAGGTCTTAAAATTATAACATT
ACCTTGTATCAGTGAAAGGGTTGCCTAGGATATCTCCTTGTGACCAAAAA
CAAACCAATCACTATAAAGGATGAAAATTAAAAACTTTTTTGATGAATCT
AGCAAAGCTTAAATCTCTTCACCTTCAATGTTAAACATTTTCTTGAAATA
ATCGAAATCAATATTCTTCCAATCATGATCTATCTTTTCAGAATTCTGAA
TTCAGAATTTTTTGAGCAATCACCAATTATCAATTCCATTTTCTTTTCCT
TCTTCAGACTGAAAGCACCAACAAATCAGATACTGACAGCAAAGCATCCA
AAGTGAGTCGAACCAGTAGTTTCGCAGGATTCGGGAGCTCTCTGAGCAAA
AAAGTCTCATTTCTGGCAAGTCCTAATTCATCAATATCCTTTAAGAAGAC
AGTCGGAAAACGAACGTCACTCGGATATCAATTGCAATGATTCTGATTGG
CTAGATATTAAGCAGTAGTGAATCTGATTGGATGAATAACGAGAAGTAGC
GAATCTGATTGGATGAATATCAAGAAGTAGTGAATCTGATTGGATGATTA
TCAAGAAGTAGTGAATCTGATTGGATGAATATCAAGAAGTAGCGAATCTG
ATTGGATGAATATCAAGAAGTAGTGAATCTGATTGGATGAGTATCAAGAA
GTAGTGAATCTGATTGAATGAATATCAAGAAGTAGCGAATCTGATTAGAC
GATTATCAAGAAGTAGTGAATCTGATTGGTTGGATAAAGAGCAGTGGATC
TGATTGGATAAATATCAAGCAGTAGTGAATCTGATTGGTTGGATACAAAG
CAGTGCAGTGGAAATCTGATTGGTTAAAAATCGACAATAAGCTATGAATC
TGATGGTTGAATGTTAAAAAAAATGCAGGAATAATGAAGATAACTAATCT
GGATGAATGAATATAAACAAAAAGTCACGACTCTGATAGGGAGATAATTT
ACAAAAGATATGAATGAATGAACAATGGATAATCAACAGATATTGGGTGA
ACAATAAACTTCGAGAATGATTGGTTGATAACAAACAATGGACAGTGTTA
ATTGATGACGTTCACGAAAGAACCAAAGTCTCATGATGAACTAATGAAAT
TTTTTAGCTAAAATGCATGCATGTATGAATAACAATTAACCTAATCATAG
AAAGCGTATAACATATATGAGAACGATGTTGCATGTGATCAAAGTCATTT
CGTAATCGAATTCTTTTTTTGGCGATTGACAACTGTTGGTAGATCCTGAA
TCAAAATAGATAAAAATGCAGATAGTTGTTCCTATCAACAAAACAAAAAA
GCTAGAAATCTTTATTTTATAAATGATATGCACCAACTGTATGACTGTAT
TTCTTTCTTTACGTCACTTGCAACAAATCAGCTGTTTTGAATAAAGTTAG
GAGACATTGCAGGGGTGCATTTCTTAAATTAACGGTTTACGAAAAAGTAC
AAATGTATGAGCTTCAACATCAAATCTTCACGAACAGTTTTTTTTGTGAC
GAAACTGATATAATTTTTTCAATTTTAACAAAGGAAGGGTCAACTCAATA
AGTTAAATTTTATTTGTAAATATTTTTACCACGCAAATCTTTTTTTTTTG
AAAATAACTAACGGATGAAATGAAACACACGACTCATTTTATAAATCAAT
TTTTTATGTTTTTACTATATTTTTTTATATTTTGTACATAAATCCTTTTA
TAACTTTTGAGAATTTTTTACAGTGCTATTTATGAAAACAAACATTTATA
TTATAACTCTACATAAATCTTGTGCTTCGATATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000336XLOC_000336Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000565-exon-sc0000002-1575043694:743251..743329TCONS_00000565-exon-sc0000002-1575043694:743251..743329Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:742570..742631TCONS_00000565-exon-sc0000002-1575043694:742570..742631Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:742186..742284TCONS_00000565-exon-sc0000002-1575043694:742186..742284Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:741186..741290TCONS_00000565-exon-sc0000002-1575043694:741186..741290Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:740698..740847TCONS_00000565-exon-sc0000002-1575043694:740698..740847Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:739954..739998TCONS_00000565-exon-sc0000002-1575043694:739954..739998Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:739572..739723TCONS_00000565-exon-sc0000002-1575043694:739572..739723Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:738304..738517TCONS_00000565-exon-sc0000002-1575043694:738304..738517Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1575043694:736495..738022TCONS_00000565-exon-sc0000002-1575043694:736495..738022Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:743251..743329TCONS_00000565-exon-sc0000002-1510915933:743251..743329Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:742570..742631TCONS_00000565-exon-sc0000002-1510915933:742570..742631Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:742186..742284TCONS_00000565-exon-sc0000002-1510915933:742186..742284Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:741186..741290TCONS_00000565-exon-sc0000002-1510915933:741186..741290Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:740698..740847TCONS_00000565-exon-sc0000002-1510915933:740698..740847Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:739954..739998TCONS_00000565-exon-sc0000002-1510915933:739954..739998Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:739572..739723TCONS_00000565-exon-sc0000002-1510915933:739572..739723Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:738304..738517TCONS_00000565-exon-sc0000002-1510915933:738304..738517Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1510915933:736495..738022TCONS_00000565-exon-sc0000002-1510915933:736495..738022Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:743251..743329TCONS_00000565-exon-sc0000002-1491911889:743251..743329Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:742570..742631TCONS_00000565-exon-sc0000002-1491911889:742570..742631Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:742186..742284TCONS_00000565-exon-sc0000002-1491911889:742186..742284Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:741186..741290TCONS_00000565-exon-sc0000002-1491911889:741186..741290Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:740698..740847TCONS_00000565-exon-sc0000002-1491911889:740698..740847Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:739954..739998TCONS_00000565-exon-sc0000002-1491911889:739954..739998Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:739572..739723TCONS_00000565-exon-sc0000002-1491911889:739572..739723Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:738304..738517TCONS_00000565-exon-sc0000002-1491911889:738304..738517Clytia hemisphaericaexon
TCONS_00000565-exon-sc0000002-1491911889:736495..738022TCONS_00000565-exon-sc0000002-1491911889:736495..738022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:736495..743329 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.117467	0.0144514	0	0	0	0	0	0	0.000267772	0	0	2.14633e-10	0	0	0	0	0	0.0884541	0	0.0254887	0.0303913	0	0	0	0	0	0	3.60656e-06
Blast
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BLAST of TCONS_00000565 vs. Swiss-Prot (Human)
Match: EPHA7 (Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 PE=1 SV=3)

HSP 1 Score: 354.369 bits (908), Expect = 7.922e-107
Identity = 156/310 (50.32%), Postives = 228/310 (73.55%), Query Frame = 1 
Query:    1 DFLSEAAILGQFSDPNVVSIEGVVLKDYPSLIVLEYMANGSLDKYLVKNDSQFSVAKLLGMARGVASGMKYLSDLGFIHRDLAARNVLVNSEDCCKIADFGMSRELKTDD--TYDTKGGKIPIKWTAPEAIEYKKFTTASDVWSYGIVCWEIFSYGERPYWEWSNYEVMERLSTGYRLPPPMECPKGIHDLMLQCWHKDRLKRPRFSNILQKVEEWLKNPDRLTDIASVITKR-----DENL-DYSVLDDLASWLEAINMKQYLKMFTESGYMTPKDILYLTNEDLESLGVGLIGHRKKLLKAIKNTKNQ 906
            DFL EA+I+GQF  PNVV +EGVV +  P +IV+E+M NG+LD +L K+D QF+V +L+GM RG+A+GM+YL+D+G++HRDLAARN+LVNS   CK++DFG+SR ++ D    Y T GGKIP++WTAPEAI+Y+KFT+ASDVWSYGIV WE+ SYGERPYW+ SN +V++ +  GYRLP PM+CP G+H LML CW K+R +RP+F  I+  +++ ++NP+ L       ++      D+N  D++    +  WL+AI M++Y   FT +GY + + +  +T ED+ SLG+ L+GH+KK++ +I+  + Q
Sbjct:  678 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNPNSLKTPLGTCSRPISPLLDQNTPDFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMRAQ 987
The following BLAST results are available for this feature:
BLAST of TCONS_00000565 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EPHA77.922e-10750.32Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 ... [more]
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