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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000533 ID=TCONS_00000533|Name=TCONS_00000533|organism=Clytia hemisphaerica|type=transcript|length=1284bp
NNGACGTATCGTGATCACTCCGAACACGGATGATGAGAAGCGTGTCATAT
GTGACGCCTCCGTGAAAGACGTACGCCCGTATTTGTGTTGCACCGTCATA
AAGAATCTTGACCTGTCGGATGAAACTGTCTTCAAAAACTTCTTATCCCT
ACAAACGAAACTTCACGAGAATGAATGTGACATGCGCACACGTGCTACCA
TTGCAACCCATAATGCAACAGGATTGAAATTCCCGCTTGTTTTCAAAGCT
TCGCATGTGGGTCAGACTGTCATCCATGCATTAGGGAAAAAGAAACAATG
CAATGCGACAACATTGATACAGAATCTGAAAGATGAAAGAGATGCATTGA
AgcagaaaaagaaaagacaacCGAAAACTGGATTGTACAAGTTTATTGAA
CTGGTGGATGGACAGGAGATGATAGCTTCAGTTCGAAATCAAGATGGTGA
CGTCATTTCGTTGCCTCCGATCACTAATGGTGAAAAAACCaagATCGGTG
CTTCAGTTGGTGATGTTTTCATTGAAATATCATCACCAGTCAGTATCGCA
CAATGCAAGTACGTTATGGAAGAGTTGATCAAGAAAATGTTCCAACAGAA
TTTCAACTCGGACATGGAAAGTGATGAAGGGCTTTGGATTGAACCAATCA
GAGTTGtggatgaaaatgaagatttgagaATAGTTTATCCCTCTAAAATT
GATAtcgatttttcaaatattccaGTCAAACGACTGTGAAATGATTTGAT
TGACCGGATTTAGACGATTCTACTACTTCCCAGGTTTTCCATCATTGTCT
TTGAAGATGATATCATGTATAAGGACTTTGAACTTGGCTTTGAAGGATTG
tacttcaaaataatttgatgttGCATCCTTGACTAGTCAGTCATTTGgtt
gattttcatatttttggtcATCACTCAAAAGGACTGTTGAATTCTGTCCA
ACATATATGTCATCAACTGCTGTTTCATTCCACGAAGTTGTATTTGAAGT
TTAGATTTTTTGAacgaatttaaatatttccGAAAACATAAATCTATAAT
TAAGTCGATCAAAGACTCTATAACTACCTTTGTTAAATGCCCTAAATTCT
ACCAAGGAAATCGAGTGCTATTACGACATTTAGTGTAGTGCCAGTGTTGA
TAAACGTTGATCAAAACTCGCCTATCTGTCGCCCATCAGTCAATTCCgtg
acaaaattatttttaagcaTCTCGTTAAGTAAGTGTGCTCAATTAAAAGA
AACATCTTTAATAAGTTTCTGTTTATCAGTCCca Run BLAST on NCBI transcript from alignment at sc0000002:400832..414423- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000533 ID=TCONS_00000533|Name=TCONS_00000533|organism=Clytia hemisphaerica|type=transcript|length=13592bp|location=Sequence derived from alignment at sc0000002:400832..414423- (Clytia hemisphaerica)
NNGACGTATCGTGATCACTCCGAACACGGATGATGAGAAGCGTGTCATAT
GTGACGCCTCCGTGAAAGACGTACGCCCGTATTTGTGTTGCACCGTCATA
AAGAATCTTGACCTGTCGGATGAAACTGTCTTCAAAAACTTCTTATCCCT
ACAAGTATGAATTTTATTTACTTTTATCCCTTCCTATTTTTCTTCTTTAA
AGAATATAGCTGCATGCTTTTGAAAATTAGATTTTAAAAACTCGAAGCCA
ATTGCGAGATTAATGCTTATTTCGGTGAGTTTTTTTTAAACTTTCATAAT
TAACCAATTAGCTTTCTCCGGAGATAGCTGTCACCAAAATTCCCCTAACG
TTTACCTAATTCAATATTGGAGCTATTAGGTTTCGTAAAAGTGGTAACTG
GAGTGATCGTGATCTGCGGATAAATCTCAGATCTTCAAACTGGAGCTTAC
TTAATACAACATTTTATCGCAAAGTCATTTGGTTCATTTGACGTTATTAG
ACAGGTACGAGCCGGGAAGTATCTTATCCATTTGGTGGACTAACTTTCTT
GGGGTTTTTCTTGTTCCTTATGTTAATAAGAATGTTTTAAGCTTCTGGGC
CACCTGGATTTCTCACCTGGGTATCCATAATGGCGGATTTTTGGTCATGT
GACCCCCGTAGGCAAAACTGAAAATTNGTTGAATTATTTGGAGATTTCAG
ATACTTCTCTTATTGAGATCCCTGATGATATGGCGAAATTAACAAATCTT
ATCAATTTGGCTTTACATAGGAACAGTATTGAAAAAGTTGGAGATTTCTT
TAATCATTTACCGAAGCTGAAATTCTTTGATATGTCTTTTAACAAATTGA
CAAGTCTACCAGAGCAATTAAATTTAGGTACTGTACACACGTTGAATTTA
TCTAATAACGAGTTGGCGTCTTTAGGTGATCTAAGTGGGGCTGTTAATCT
TAGTATTTTACACATAGAACACAATGAGCTAGAAGAATTACCTACAGGGT
TAGTCACCTTAAAACATCTATTAGAAGTGCACGCCAGCAATAACCTAATA
AACACCTTACCTGACGATCTACACACTTTTCCCGCGCTGAAATTATTTGA
CGTCTCCGAAAACAAGTTGAAAGAAGTACCACACTCAATGTCTCAATGCC
AACGTTTGAAGACGCTCAAACTTGAAGGGAACCCCCTGAAAGATAATCGA
TTACGTAAGATGACAACACAGTGCAATACTAGAGCTATACTGGAATACAT
TGCCAAGCAGAGTGGTGGAGACGGGGGTAAGAAGGGCAAAAAAGGAAAGA
AAGGGAAGAATCAACCGGTTAAGGAAGAAGCAGAAGAGAACGTCAGACGT
ATCGTGATCACTCCGAACACGGATGATGAGAAGCGTGTCATATGTGACGC
CTCCGTGAAAGACGTACGCCCGTATTTGTGTTGCACCGTCATAAAGAATC
TTGACCTGTCGGATGAAATTGTCTTCAAAAACTTCTTATCCCTACAAGTA
TGCATTTTATTTACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCTTCTGGGCCAC
CTGGATTTCTCACCTGGGTATCCATAATGGCGGATTTTTGGTCATGTGAC
CCCCGTAGGCAAAACTGAAAATTCTTCCAACCCGAATATAGGCATATCAT
ATATCAATCGATCGGAAATTCGATACTGATTAATTTTGAGATACAAAGTT
GAGTCTGAAAACTTTTCTATCTCGAGATATAAATCACTTTCGTTTTCTCA
GGTTTGGCTGCAGTTGTAGGCGGGCTTTCATGGAGTGAGGCAATTCTTTT
ACTCATATCTCAAGAAATATGCTTTTAAACATATCAAAACTTTATGTGCT
CCTAGAAAAGGCATTAAAAATTGTTTGTGCAAATTTTCAATAAGTTTGCA
GTAAAAATGTGTATTTTACAGACCAGAGTACAATTTCCTTACCGTTGAAA
AAAGATCTTTTTCTCTCATAATTAGCCTTTTTGTCTGAAATGAATGAGTG
AAATGTTTCCCAATAGGGTTTAAAACCAATCACTTATTCGTAATCTCACT
CAGAGGGGTACTTAGCAACAAGTAAGGGCTAAATGTATCCGGTCAGCACT
TTATAAGTACCTATGATTTACGGTAAGACATGATCCCAAAAACGGTGAAA
TTTCCAAATAATTAATGAAAAATTCTCTCATTGCATCTCAACATTAAACG
AGAACCTTCTGTTCTTTAGATTGACTAATGCAAAGAATTATGAATAATGT
AAATCGTTACAGTGTGTATTTTTACAGACCAGATTTAAGTGCTTCTAGGA
GCTTGTCTTGTTCTAAAACGCTTTGGATTACTACAGAAATTCGCGAACTT
GAGAATTTACTGAGTTAATCCGTCAAAATTCGCCAATTCCTTTATCTTTA
TTGTTCATGCATGAAACGAGATTTAGAGGGCTTAGAATCTGTGTTGTCTG
TAGGGCCAAAAAATGTCGGCCTAATATGGCTTCGAGAGGCGATAATCCTA
GGCCATTGTAGGAAGCCTAGTGATGGAGCCATTTTTGTGAACCTGCTTGG
GGCTATTCTGGTTACTGTTACAATTATAAGAGGCGTATAATGGTCCAATG
CATCATTGTATATCCGCTTTAACTACATGAATGCAACACAACGCCTTCAG
CTAGTTGAATAAGTCAGACTGTGGGAATTTTAACTAAAAGCACTTTAAAG
AAGTTATTGCCATACAAAATAATGCTTTAAGCTACATGTCCAAAATATCC
CCGTTTTCTTACAAAAATCTTAGTATAATATTAAGCAATCTTGATTTTAA
AATTCTTATTTGTTTCGGACATGGCTTGCTGATGACGGTGATCCCATTTT
CCTTTCCCCTCATGAGGTTTTGTCAGAACATGAACAAACGACGGGACATC
CTTCTCCTTCGTAAGCACTGCTAGCTTCGTTGCCGCCTCGTTAAAACATA
AAATGAAACAATAGGTTTTGATGATCTACCTTGGGAATACCTTGCTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGT
TCTACTCTTCTCCAGTCTTTTATCTATATCATAACAAAGATAACAGATGC
GAAATCATCGTCATTTTTCTAAACTCCGATGAAATAATATCGAGTATATA
GGATTGAGAGCATAGGATTCAAATTATGATATTCTTATGACACAGGCTCA
CAACTTTGGCATACCTTTTTTTTTTCAAGTCAATAAAAAAACTAATTGGA
ATGACAAAAGTGATTCAAAAGTATACACACAGTTGAAATTCTCCATTTCA
GCGTATAAAAAAAATTGAAAATAATTATTTTGTGACTTGAGAGAAACTAG
CCGTATGCGCAGCGTCGCACGCTGCATGTCCCAATCCAGCAAATCACATC
TAAAAAAAACCCAACGGAAAAAGGATTGCTGCTGATTGATGATAAGATTT
TGATTTTATAAAAGAAAGGAGAAAAAAGTTCAACGCCATGAAGAGGAGGC
TTTGTAGAGCTTTGTTAGATTTTCGAAAACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAACGTTGTAAACACACACGTTTTAGCATATTA
ATATATAGATTTTCAAACTATCAAGCTATCTATCAATCATTTTACCTAAG
TAATTCAAAGAAATAGCATTGTGATGGAATATCAACGGATTTTTTATACC
AATTTTAAAATACAGGCGGCTACAAAGACACCATGGAAGATAGACGTCCA
GTTATGATTTATCCCATGTGAAGGTGCAGTAGTGTACCAAGTATTGACCG
TCGTCTAGGAGATCAGGACTAACTCCAACTCGGTGCTGTGTTTCACTTAA
TGAAAAGTAAATGCTACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTCTCAAAGACAGGCTACACAGAT
TTCTCGTTACATGCATGAATAATAAAGATATAGGAATTAGAGGATCTTGA
CGGATTTTACTCAGTAAGATTCTCCAGCTCCGGATTTTCCATGGTAAGTC
TAAACATTTTAGGGTAATATAACCACCTAGAAGCACTTAATTCTGGTCTG
TAAAATACACACAGCGATTTACATGTATTCTTGATTCTTTGCATGTGTCA
AACTAAAGAATAAGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAACTTTGTTTAATGTCGAGATACAATGAGAGACTTTGTCAAA
TATTTGAGTAATAGCTTGGAAGTTTCACCGTTTTTTGGATCAAATCTTAC
CAAAAAAACATACTGATAAAGTGCTGACCAGACACATTTAGCCCTTATAT
ATTTCCCAGGTACCTCTCGAATATAATATGAAGAATCGAGTGGCTCTAAA
CCTTATTAAGCATCATTTTACTAATTCATTTCAGACAAAAAGGCCAATTT
TGAGTAGTCTAGCAAGCTAGAAGACTAATTCAGATATAGTAGAAATAAAA
CAAAAAGTAATGGAGGGAACAAATTTTAGTCGTCTAGAAACCTTTGTGCA
AGCCAAAAGCTTCATATTAATATTGCTTTGCTATTGTTAATGAAAAAAAA
ATCTAGGGGGCTTGTTCGGAAAAAAACGGTTTGTTTTGATTTCGTAAATC
GATTTAATTGGTTTAGAAAAAACAATCGAGACGCACACCATTGGTCGAAA
TACATAAAAAGAGAAATCAGAACACACAACAATTTTCTTTCTCGAAAAAT
TTTTCTCGTTTGTTTTAAACTAACTCCAAACAAAAGAAAAGTGTCATGTC
AATATTGCAATTATAATTTTTCTTCCCGCTCAAAAAAAATTTTCTTTAAA
AAAAAAGTGTGTTGATTTGTTGTGTGTTAAATTTTATTTTATTTTTCGTC
TTTCATTTTGTTTTGAGAGTTTGTTGTTGCTTGATCAAAAATTAATTTCT
CCTTACCTTTCGCGCGCCAAATTCTTACGGAAGCACCCCTGTCCGAGAAA
AGCTTTCTTTTGTTTTCAGAAAAAACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCCGTAACAATTATCGTATTATCATATAACGCCTATACTACTGTATT
ACACGCATTATAAACGACTCCAGTCTAAATTTTGAGAAAAAAAGATCTTT
TTTCGACGGTAAGGAAATTGTACTCTGGTCTGTAAAATACACATTTTTAC
TTCAAAATTTTTGAAAATTTGCACAAACAATTTTTAGTGCCTTTTCTAAG
AGCACATAAAGTTTTGATATGTTTAAAAGCATATTTCTTGAGATATGACT
AAAAGAATTGCCTCACTCCATGAAAGCCCGCCTACAACTGCAGCCAAACC
TGAGAAAACGAAAGTGATTTATATCTCGAGATAGGAAAGATTTCAGACCC
AACTTTGTATCTCAAAATTAATCAGTATCAAATTTCCGATCGATTGATAT
ATGATATGCCTATATTCGGGTTGGAAGAATTTTCAGTTTTGCCTACGGGG
GTCACATGACCAAAAATCCGCCATTATGGATACCCAGGTGAGAAATCCAG
GTGGCCCAGAAGCTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCTTATGTGCATGTTTTGAGTGTATTTTTAAGCAATCTAGA
GCTCAAATTTTCAAAATTTCCCCCCTCGGGCCAAACCATGGTTGGCCCTT
GCGGTGTCACTAAACTTCAGCCCCCCCAATATGAAAATGCTTCCTACGGC
ACTGCCTCAAGGAAACTAATTTTAGCGGGAACTAAATTTCGCGGTCGAAA
AAAAATATGGAAGAAATGACTTTGGAATTAATTTTCGCGGTTTTGCCCTA
TTTTGGAGATTATTTTTTATTTTCCGAGCGTTTTTCAAATTTTTCGATGG
AAAATGGTCGAATTTACGGAAATTAGTTCTTGCGAAAATTTGTTCCCTTA
AGGTAACTGAAAGTTTGACAAAAGTGATGCTAAAATCAGGTTTAAATTAT
ATTTCTCTTTCTTTACAGACGAAACTTCACGAGAATGAATGTGACATGCG
CACACGTGCTACCATTGCAACCCATAATGCAACAGGATTGAAATTCCCGC
TTGTTTTCAAAGCTTCGCATGTGGGTCAGACTGTCATCCATGCATTAGGG
AAAAAGAAACAATGCAATGCGACAACATTGATACAGAATCTGAAAGATGA
AAGAGATGCATTGAAGCAGAAAAAGAAAAGACAACCGAAAACTGGATTGT
ACAAGTAAGGGATATTCATTCTCTCGAGACCTATTTCATATAACAGATGC
GAAAGGTTGCTTGACATTTTTTTGTGAAGTGTAACGGATGTTTGTTGATT
TGAGGAGTGAGCGAAAAATATCGAAGAAATTCTCAAATACCTATTCATGA
CATTTGACAACCAATAGGGGGCTTACCTGAATTTATCAACAAGGACTCGT
TTAGCCTGATTCGCAGACCTCTACAAAACCGCAGATAGTATAAGAGCACG
AATCCGTCAGGGGATGCCAGCAGCCTAGGATTTATGTTTTAGTAGATCTT
TATGATCTAATGAAGTGGAGCGTATAAAGGTAGAGCATTCGTCTACGGTG
CGCAAGGTCGCGGGTTCAATCCTCGGTCTGATCATAACCAAAGACTTCGT
ACACTGTACAAAATGGTACTTAAGGACTCTCTGCTCCTTACTCAGCAATT
AAGAGAAGGAGTATTAAGAGTGGAACCCTACCTACCTTCGGATAAATAAC
TACCGAAAGATGAGTGCTCAGGTCGCTGCCGTCTGTGGTTGCAAGCCTTA
CTTATTATAGATCTCTAATCAATTTGTTTCACTTTCTTCTGAAGGTTTAT
TGAACTGGTGGATGGACAGGAGATGATAGCTTCAGTTCGAAATCAAGATG
GTGACGTCATTTCGTTGCCTCCGATCACTAATGGTGAAAAAACCAAGGTA
TTTTTTTTTTCCGATACTAGTATAGTACCTGTTTCAACTTGATAAAGGCA
AACCGTCGAGACGTCGAATACAAAACTGTGTGTTTTTAATGTTCACCTTT
TCCTGCTTTAGATAGAGAGAGGAGAACCTATTTTTTTTTCTCGATTCAGA
TTTTACCAAAATCTCAGTCAAAACTTCTGGAAATCATTTAAATTGATTTT
TCCTAACTTCAAGATGTAAAAAAAGGTACACTTATGCCTCGTTACGCAGC
GTCCTTCCCCTCATGAGTTTTTGGACCTACTTCGGAGTTCGTCCGTCCGT
CTGTTACCAGCTTTTCTCTAGATTGGCTCATCAGTTTTTTCTGATTTTTA
GCACAAGGATGCAAAATGGCAATGCCCAAAATGTGACGGAACCCGATTTT
CGAAAAAAAAAACTTTCCACCGGAAAAACTGTTTTTTTTGTTTTTTTTCG
AGATTTTATTTTTTGCTCAAAGATGCGTATTAACAATGCCCTAAACATGG
CCGAGTCCGATTTTTGAGAAAAATTTTTTTCCGGCCGAAAATGCCGGAAA
TATGCCGGAAATCGCTGTTTTTCTGGATTTTCATTGGATTTTTTTCTTAA
AATTGCTTGTTTTTTCATTCAAAAACATTATTAATAGCAATGCCCACCAT
CAAGCATGTTTTAATTTTCAAAAAATTTGATTTTTGAAGCCGGAACTATT
CAAAAATCGCCGGAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGA
ATTTAATGAGCTGTGCTTAATATTTTTTAATTAAATTTTGCACACTGATG
CAAAATGACAATACCTAAAATGTGACGGAGCCTGATTTTCGAAAAACATT
TTTTTCTGGCCGAAAATGCCGGAAAAACCGGTTTTGTCTGATTTTTTGCA
GAAAGATGCGTATTCGCAATACTAAAAACATGACCGAGTTTGTTTTTTTT
GAGAAAAATTCTTTTCCGGCTGAAAATGCCGGAAATATGCTGGTAATTAC
TGTTTTTGCAGATTGTCATTTGACTTTTCCCTCATTCTTTGTTTTTTCAC
ACAAAAACATTTGCCCACCATTAAGCATGATTAAATTGTCAATAAAACTG
ATTTTTGCAACTGGAACTTGCTATTTCTATTTTTTCCCTACTCCCCTTCC
CTCTTCCCCCATCAACAATCAATTATAAAATTGAATGTGTTATGCATTTT
TGCAAAACGCTATATCGTCTGACTGATTGTTTTCATTTTTCTCCTTATTG
CTATCTAGCTTTCATCATCAGGTAGGTCCATTCAGCATGTTGCTTGTTGA
AATATTTAGACTAGATTTCATAATTATTCCCTTTTTTTCTTTTCCCTACA
GATCGGTGCTTCAGTTGGTGATGTTTTCATTGAAATATCATCACCAGTCA
GTATCGCACAATGCAAGTACGTTATGGAAGAGTTGATCAAGAAAATGTTC
CAACAGAATTTCAACTCGGACATGGAAAGTGATGAAGGGCTTTGGATTGA
ACCAATCAGAGTTGTGGATGAAAATGAAGATTTGAGAATAGTTTATCCCT
CTAAAATTGATATCGATTTTTCAAATATTCCAGTCAAACGACTGTGAAAT
GATTTGATTGACCGGATTTAGACGATTCTACTACTTCCCAGGTTTTCCAT
CATTGTCTTTGAAGATGATATCATGTATAAGGACTTTGAACTTGGCTTTG
AAGGATTGTACTTCAAAATAATTTGATGTTGCATCCTTGACTAGTCAGTC
ATTTGGTTGATTTTCATATTTTTGGTCATCACTCAAAAGGACTGTTGAAT
TCTGTCCAACATATATGTCATCAACTGCTGTTTCATTCCACGAAGTTGTA
TTTGAAGTTTAGATTTTTTGAACGAATTTAAATATTTCCGAAAACATAAA
TCTATAATTAAGTCGATCAAAGACTCTATAACTACCTTTGTTAAATGCCC
TAAATTCTACCAAGGAAATCGAGTGCTATTACGACATTTAGTGTAGTGCC
AGTGTTGATAAACGTTGATCAAAACTCGCCTATCTGTCGCCCATCAGTCA
ATTCCGTGACAAAATTATTTTTAAGCATCTCGTTAAGTAAGTGTGCTCAA
TTAAAAGAAACATCTTTAATAAGTTTCTGTTTATCAGTCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000533-exon-sc0000002-1575043694:414270..414423 | TCONS_00000533-exon-sc0000002-1575043694:414270..414423 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1575043694:403670..403905 | TCONS_00000533-exon-sc0000002-1575043694:403670..403905 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1575043694:402977..403079 | TCONS_00000533-exon-sc0000002-1575043694:402977..403079 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1575043694:400832..401622 | TCONS_00000533-exon-sc0000002-1575043694:400832..401622 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1510915933:414270..414423 | TCONS_00000533-exon-sc0000002-1510915933:414270..414423 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1510915933:403670..403905 | TCONS_00000533-exon-sc0000002-1510915933:403670..403905 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1510915933:402977..403079 | TCONS_00000533-exon-sc0000002-1510915933:402977..403079 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1510915933:400832..401622 | TCONS_00000533-exon-sc0000002-1510915933:400832..401622 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1491911889:414270..414423 | TCONS_00000533-exon-sc0000002-1491911889:414270..414423 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1491911889:403670..403905 | TCONS_00000533-exon-sc0000002-1491911889:403670..403905 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1491911889:402977..403079 | TCONS_00000533-exon-sc0000002-1491911889:402977..403079 | Clytia hemisphaerica | exon |
| TCONS_00000533-exon-sc0000002-1491911889:400832..401622 | TCONS_00000533-exon-sc0000002-1491911889:400832..401622 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:400832..414423 - |
Blast
BLAST of TCONS_00000533 vs. Swiss-Prot (Human)
Match: LRC47 (Leucine-rich repeat-containing protein 47 OS=Homo sapiens GN=LRRC47 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.547e-43 Identity = 94/245 (38.37%), Postives = 140/245 (57.14%), Query Frame = 2
Query: 62 VKDVRPYLCCTVIKNLDLSDETVFKNFLSLQTKLHENECDMRTRATIATHNATGLKFPLVFKASHVGQTVIHALGKKKQCNATTLIQNLKDERDALKQKKKRQPKTGLYKFIELVDGQEMIASVRNQDGDVISLPPITNGEKTKIGASVGDVFIEISSPVSIAQCKYVMEELIKKMFQ----------QNFNSDMESD-----------------EG---LWIEPIRVVDENEDLRIVYPSKIDI 706
V+DVRPY+ V++ +DL K FL+ QTKLHE+ C+ RT AT+ATH +K PL++ A I LG+K + A L++ L+ E + +++KKRQ +GL++++ L+DG E + + DGDVIS PPITN EKTK+ + D+F+E++S S+ CK VM+ LI KM + + SD E+D +G L +E +RVVD L++VYPSK D+
Sbjct: 329 VRDVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYCARPPQDLKIVPLGRK-EAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPCLVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKADL 572
The following BLAST results are available for this feature:
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