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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000515 ID=TCONS_00000515|Name=TCONS_00000515|organism=Clytia hemisphaerica|type=transcript|length=834bp
AATAATCTTAATGTTTTGATTCTTGTTTGTTTACAATTTCttgcaatctg
attggatgattgGATGGTTTTCAAAGGGCCTAGCTTCTTTCCTATCAAAA
GAATTTGGAATTGCGGCTAAATAGTTTTCCTTGGTCACATAGCCTAAGAT
AATTTCTTCACAGTTTCTGCTTCAATATTTCTGTATGTAAAGCCACCAAA
TCAGAACAAGTGACAGCCGCAAGAAGCAGGAGTCAAGTCAAGTCGCATCG
AAGAATTTGGACAAACTTTGCACTTTTCCTTCTTTAACTCAAATTCAAAA
TGCTTGGTGCCCTGAGACGTGGATTATTCTCAACTAGCAGACTCCCAGTC
AACACAACCAGAAGATTTATGAGTGAAGATGCCAAAAAGGAAATGacTGT
TCCACGTATGGTTGGATCCTTAGCAGTCATCTTTGCCGCTTTGTTAGGTA
CACCTATGCTTCTGATGGCCACCCGTGAACGCCCAACCGAAGGAAAGTAA
ATTTCGTCAATCAGCACAGTGCAATGTCATGTATaatatcattatttttc
aaGTGTCGACACaattaaattgtaaatttttaaagCTGGTTTCAAGAAAG
ACCTaaaatttaacaattttttatcataattcCCTGATTTGAAGTGTTTT
CACGAAATACCGGCTCCGATTTTGATACAAAACTAGTCATGTCTGATGAc
ggtgaaaatggtcattttccGGGATTCCCGAATTCGAAAAAAACACCTGA
GTTTTTTGTATTTCATACCCCTGCTTTTTTAATCACCCGTGCTATTTCGT
AGCATTTAAACTTCAataaaaggttgtttttttt Run BLAST on NCBI transcript from alignment at sc0000002:255120..257544- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000515 ID=TCONS_00000515|Name=TCONS_00000515|organism=Clytia hemisphaerica|type=transcript|length=2425bp|location=Sequence derived from alignment at sc0000002:255120..257544- (Clytia hemisphaerica)
AATAATCTTAATGTTTTGATTCTTGTTTGTTTACAATTTCTTGCAATCTG
ATTGGATGATTGGATGGTTTTCAAAGGGCCTAGCTTCTTTCCTATCAAAA
GAATTTGGAATTGCGGCTAAATAGTTTTCCTTGGTCACATAGCCTAAGAT
AATTTCTTCACAGTTTCTGCTTCAATATTTCTGTATGTAAAGCCACCAAA
TCAGAACAAGTGACAGCCGCAAGAAGCAGGAGTCAAGTCAAGTCGCATCG
AAGAATTTGGACAAACTTTGCACTTTTCCTTCTTTAACTCAAATTCAAAA
TGCTTGGTGCCCTGAGACGTGGATTATTCTCAACTAGCAGACTCCCAGTC
AACACAACCAGAAGATTTATGAGTGAAGATGCCAAAAAGGAAATGGTAAG
TTATGTAAATAATCTTACCTCGCTCTCCTCTGTGAATGAATCTGCCTGGC
TCTCAGCTTTTTTTTGTCGATGGTACTGCTAGAAATTTTATTGTGAAATA
ATTTTGGGAAATTGGGCAAATTCAGTGAGAAAATTCAGAGGAAGTGGGAG
ATTTTGAAAGAAATTTTTTGTATGATTAATTAACCCACTGGGAAACCTAA
AATAACCATCAAAACAAACCCTTTTTGGAAATTCTAGAGAATGTCCAAAA
TTAATTCCACCAAATAATAGTACAATAACTAGTAAAAAAGCCACGTTGCC
AGAACATTTTTGCTTTTAATTCACACCATAGTGGATTACATGCAAAGTTG
ATGGCAGCAAATTTTCTGTGTTCGGATTTGATTAGAAAGTATGCAAAACC
TATGCTAAAAGATATATATAAAGTAGAATAAATATGAAACTTACATGTAC
AATTGACATTATACCACAAGTTGCTATTGGTCTAATGTTGACATCCGACA
TCTAATCTAACACCCTCCTTTAGAGATAGGAATAACAAGAAGGTAAGAAT
CGATGATTGAAAATAGATTTCTTTGCTTTGCTATCAGAGAAAAAAAATCT
TTTTTCAATCAGTGATTCTGACATTCCTATTATTTCTATCCTACGATATT
GACCCTGTAAGTGTCAATCTTCTTTTTCACACCCGACCTATTTGACGACC
CTGCCAATTCCCTGGACAATCCAGGGATTTCTTGTAAATGTCCAGGGATT
TTAACATTTATTTTGAAACTTAGTGCCCCGGACGCCCCGGACTTGGTGCG
TTGTTTGCGCTACGCACGTAAAGATAGTGAAATATGCCTTACTGGCACTG
TGATGTGCCGTACTGTCTATGTGGCGTGTTGTACCTGATCGTGCGGTACA
TTTAGATGGTTGTGCAGCGTGCCTCTACGGACGCGCGTGATGGTGCACAA
GTTACATGTCCGGGGAAATATAGTTTTTTTTCGATCCTAGACATTTACCC
CGGATTGTCCGGGGAATCAGCAGGGTCGTCCTATTTGCCAGGACATTTTT
TCACACCACAACCTATTTAGCGCATGTCAGCATATGCCAACATAGGCAAA
AGGTAGCGATTTTCACTTCATTTTCTGAATAATACAAGAAGTATCAGCCA
AGGACTATAAAATTTTGAGTTGAACATTGTAGAATAGTTACTTTTCAACA
TCAAAGTTTGTAACTATTCATTCTTTTCATTTCAAACCATCTAATGCAAA
ATCTTTGTAGAAAATGATAAATTTCTGGCAAAAAGGTCGAGATTTCGCAT
GTCGTCATTTGCCGACATCGGCAGTTAATAGGTCAAGGTGCAACCTACTT
AGAGGCCTTCCAATTATTATCAGCAGGAAAGAGTGTTATTAGATGACATT
ATACCAAATTACGATATCAGAATTATTGAGTGTTGCATATGCAATAGCCT
ATGGGAAGTGATAGAGCTTCTAGAGATTAGAATGTAGGTGTCTGAACCCT
CTTGCGCTGTCTCAAAACTTATTTATGAAGTTTAAATAGCAGAGAAAAAT
AATGCAATTTAAAGTTTTATATTTATTTGTTTTTAGACTGTTCCACGTAT
GGTTGGATCCTTAGCAGTCATCTTTGCCGCTTTGTTAGGTACACCTATGC
TTCTGATGGCCACCCGTGAACGCCCAACCGAAGGAAAGTAAATTTCGTCA
ATCAGCACAGTGCAATGTCATGTATAATATCATTATTTTTCAAGTGTCGA
CACAATTAAATTGTAAATTTTTAAAGCTGGTTTCAAGAAAGACCTAAAAT
TTAACAATTTTTTATCATAATTCCCTGATTTGAAGTGTTTTCACGAAATA
CCGGCTCCGATTTTGATACAAAACTAGTCATGTCTGATGACGGTGAAAAT
GGTCATTTTCCGGGATTCCCGAATTCGAAAAAAACACCTGAGTTTTTTGT
ATTTCATACCCCTGCTTTTTTAATCACCCGTGCTATTTCGTAGCATTTAA
ACTTCAATAAAAGGTTGTTTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000515-exon-sc0000002-1575043694:257150..257544 | TCONS_00000515-exon-sc0000002-1575043694:257150..257544 | Clytia hemisphaerica | exon |
| TCONS_00000515-exon-sc0000002-1575043694:255120..255558 | TCONS_00000515-exon-sc0000002-1575043694:255120..255558 | Clytia hemisphaerica | exon |
| TCONS_00000515-exon-sc0000002-1510915933:257150..257544 | TCONS_00000515-exon-sc0000002-1510915933:257150..257544 | Clytia hemisphaerica | exon |
| TCONS_00000515-exon-sc0000002-1510915933:255120..255558 | TCONS_00000515-exon-sc0000002-1510915933:255120..255558 | Clytia hemisphaerica | exon |
| TCONS_00000515-exon-sc0000002-1491911889:257150..257544 | TCONS_00000515-exon-sc0000002-1491911889:257150..257544 | Clytia hemisphaerica | exon |
| TCONS_00000515-exon-sc0000002-1491911889:255120..255558 | TCONS_00000515-exon-sc0000002-1491911889:255120..255558 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:255120..257544 - |
Blast
The following BLAST results are available for this feature:
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