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TCONS_00000513 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000513
Unique NameTCONS_00000513
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3097

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000513 ID=TCONS_00000513|Name=TCONS_00000513|organism=Clytia hemisphaerica|type=transcript|length=3097bp
tttaaatcaaatattcTAATCCAGCAAAAATTTATCCGAAATGCAGCCTA
TGATTAAAATGGAATGGTTATTTTGGCTTATGGCTACTGCAGCTCTGGTA
AATTTCGGATATGGGTTGAAAAGTAGTGCTGATATTTATGCCAAACTTGT
TGACGTCATCAAAGATAAAAGTGCCGACGCCGAAAATGATTTTCTGGATA
AACATTACTTcactgaaaataaaaATGATTCAATTTGGAAATACTCCATG
GATGAAGCCGAGAAATTACTGAACCAAAAATATGACCTTGACGAGCTAGT
CACGTGGGAGAAAGAAGTACGAGATTTGAGAATGTTGTTCAAATACTGCT
CCAATGGAAAACAATCTCGACCAGACTGTCCCTCCATTTTTGATAGAGTC
CATCGTTATATGAAAGATTGGCAATGGCCAGCTTTGAGGGGAGAATTTTT
CCGGCGTTTTAAAGCTCCAATTCGTACGGCTTTTCAATCAATGGTCATGT
TGATGTTTTCTTCCATGACCAAACGACCCTGGGTTAAAACATACAAAGAA
GCAAATGACTGGTATGATAATATCAGCCATGAATATTCAGAAGTcgggaa
attttatgctgatttctcaaagaaaatccACGAAGAGCGATCATGGGATT
TTTCCGCACCTGAAGTTTGTCAATACCGTAGATTCATGTGGAAAGATTTT
GAACAACCTGCTTGTGAAACCAGATGGCGCGAAACCGACCCACCTGGTGG
CCCTAAGAACAAGCGATCAGCTGTCAATCATTTCATCGAATCCGAACGGG
AAGTAAATATCCCAATTGGGTTAAAACAACGCGAGAAAAGATCAACTGAT
AAACAGCTTCTAAGCAAAGCTCGAAAGTCAGATGCATCTCATGATTTAAG
TGAAATGcctaaaaagagagaaaaagatgacgatgatgacgatgatgacg
ACGACGATGATGATAAATCCTCAGATAGCTCCAATAGCagcgaagaagaa
gaaaaagatccATTTTTCAAAGCATTCGCTGGCAATAGTCAAGACCAGGA
AATCAAGATTGGTGGGTTCGCATCCGACTTTGAATTTATCATGAAAGGGC
GCTTCAAAGATGAAACAGCTGGCAAGGAGATAATTGTTGATCAACGCTAC
ATCAATGTGCGCGAGACAACGAAAGGGGAAGTTATCGAAGAGATGATTAG
CGAGGCTTACGCAAAACGAACCGAATTAGTGAAATCGAAAGTTGCCGAGA
TGGATAAATATGTTCAAGATACATACGGAACTATGCGTAAAGCTGAACtc
ctctttttgaaaaatgttaagaaacaaattaagaaatggcaatcaaaaaa
taatatttatattCCACAATAGACATTCTCGAGAGATGAGAATAATCATA
AATTATTAGTAATTAGAAATTTCAAGACCTgcttaatgaaaaataaactt
caTTTAGGATTTACAGTCaattctcgctaattcgaacccAACAGGGAatc
ttcgaattaaagagagtattttaagagggtttctacCTGACgggaataag
ttcgaattatagaagatcgaataagcgagagtcgaCTGTACTGTACTTCA
AATATCCTGTCcactttgtcgtaattttgtGCTCTAAAAAAGGGAACAGA
GCGTTAGTTAGTACTCataaaaagaaagtttctttccttagtaaaatttc
tttattttgtctAGCTGACATAACATTTACTTAATGGGATTTCACTTCTT
AATgcgcaaaataacaaaatttttatcCGCTTTAAAATACTCAGttgcaa
aatttgaaacttttaagTTTATAATCTTATATAAGAGTTCCAACAAAAGA
AAACCGCTGTTACTCTGTTTTTGTAGAATGAAAAGCTAATCTGAAAAACA
GGTCACATTCTAGGTACAGATTTTGATTTTAGGTTAGaaccaattttttt
cattttttgtttatttaatgAAACACATGAAATTCATTTAAAGGTATTGT
TTTtagataagagtgatatcgtttgcttactcatcgatttaaattcacaa
gctttttacattggattggcacggatgtggagcaagattgttcAGAAAGA
ttatgcttatatcagcataatataacactAGGCAAtaactgtcctgatat
gaaacatgtgcctgatatgaaacgggcttatataaaaataaaacctttaa
cgagAGATTGCCGATTTTAAAGAATCCAAATTTTAGATATGGAGGAATTG
ATTTTAATAAGAGTGAGAAGAGTTTGTAATTTGTAGGTCAAGTATATTGT
AAATAGCATTACACGTACCCAGTCCTTTGTTATTTGTTATTTTATACAGT
GAAGTCTCTTTTTTGTGGTTTTTCgtgaaaatcagcgaaaaaaaacagtt
aggttacacatcaggttagaaacttcatcatagtacccttcatgttcagt
catttgtttggtcgttttctgtcggctaatgcgatctaaaaattatggta
attttaggacatgccataacttaccgaGTCGAGTTATAAAGGTCCGAGTT
AAAAAGACTCAACTGTGCATGAATATGATAGTTCTCACGattgttatcaa
taaaatcaaagagtGATAGACGAGggtctgggtacgagattgtaagattt
tttattattttcacctCTCCACGATACCCTATATTTAAGGACGTCCCTAT
ATTTAAGGTCCGGACCGTCCTTATATTTTTCCGTCGGAAAACACAGATAT
CTATATTTCTCCTATCCAGTAGATTAAATGAAGATCAGTGGGGAAAATGG
TCCTTAAATATGGGGTAACATGCCGTACTGGTTGAGGAATTAAACATTGT
AAGATAGGTCAAACTTATTTTCCTGATTCAAAATCATACAATTTAgatgg
aaattcttttttaacCTCTTTCGGACAATAATAGTCATAATACAATTGCt
aaattttgaactttgaatTTTTGTCGTATTTTGATTACCGCAATATTGCC
ATTCAACTTACTTACTGAGTGATAAGACTTTATCATATGttgtaaacttt
ttttataagaaccatatgttcttaactttatgtgttttaagccaaaa
Run BLAST on NCBI

protein sequence of TCONS_00000513-protein

>TCONS_00000513-protein ID=TCONS_00000513-protein|Name=TCONS_00000513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MQPMIKMEWLFWLMATAALVNFGYGLKSSADIYAKLVDVIKDKSADAEND
FLDKHYFTENKNDSIWKYSMDEAEKLLNQKYDLDELVTWEKEVRDLRMLF
KYCSNGKQSRPDCPSIFDRVHRYMKDWQWPALRGEFFRRFKAPIRTAFQS
MVMLMFSSMTKRPWVKTYKEANDWYDNISHEYSEVGKFYADFSKKIHEER
SWDFSAPEVCQYRRFMWKDFEQPACETRWRETDPPGGPKNKRSAVNHFIE
SEREVNIPIGLKQREKRSTDKQLLSKARKSDASHDLSEMPKKREKDDDDD
DDDDDDDDKSSDSSNSSEEEEKDPFFKAFAGNSQDQEIKIGGFASDFEFI
MKGRFKDETAGKEIIVDQRYINVRETTKGEVIEEMISEAYAKRTELVKSK
VAEMDKYVQDTYGTMRKAELLFLKNVKKQIKKWQSKNNIYIPQ
Run BLAST on NCBI

transcript from alignment at sc0000002:212930..216763-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000513 ID=TCONS_00000513|Name=TCONS_00000513|organism=Clytia hemisphaerica|type=transcript|length=3834bp|location=Sequence derived from alignment at sc0000002:212930..216763- (Clytia hemisphaerica)
TTTAAATCAAATATTCTAATCCAGCAAAAATTTATCCGAAATGCGTTAGT TTGTTTTCCAGATTTTTGGATTGCTGGTTTTTATAAATTTCTCAACTTTT GAAAGATTTTGTCTTTTTCTGATCCTGATACTTTTTGCTGACTGTGAAGT CATGTTGAGTGAATGGATACTTAAATCAAGCAGAAATTTGAAAAACTTTA TTTTGTAAGACCCAAATAAGTCTTTGTTTAGGCTGGACGTTACTCATATG TTTTCATCCAAATTATTTTTTTTAATTTCTCTCTAGAGCCTATGATTAAA ATGGAATGGTTATTTTGGCTTATGGCTACTGCAGCTCTGGTAAATTTCGG ATATGGGTTGAAAAGTAGTGCTGATATTTATGCCAAACTTGTTGACGTCA TCAAAGATAAAAGTGCCGACGCCGAAAATGATTTTCTGGATAAACATTAC TTCACTGAAAATAAAAGTAGGTATCTTTTTTTTTTTTGCTCTCGCCATGA AGATAGCATTTATAAACAATTTTTTTCAATCTGTTTTTTGTAAAATTCGA ACAGATATCAAGAGATATGTATTCACATGTTACACCTTGGTTTTGTGACA TTTTTTTTTGTAAAAGTTTGAAATTCTTGCTTTGTAAATCCAATATCTAG AGTCTTTGACCCCCTTAGGGGGAGCATTGATATTGAAATTCTACATGTAT AAAATTTGTTGAAAATATCAACAATTTTTGAAGCCTTCTGATTTTCTTAG CTTTATGAATTTTAAATCTAGAAATGTTGTAGAAATGTTCTTTTTTCACC ATTTTCTGAGTATTTTTGTGAAAATAATTGGGCCTTTGAGAGTTCCCAAA GGCTTTAGATGTTCTTAACTTGTTCTTAATATGTTTAATATTTTTGAAAT GTAAGTGTTATGTTCTTATACATTGTGTTCTTATATAAAAGAAGTGTATC TTACTTTTTAGATGATTCAATTTGGAAATACTCCATGGATGAAGCCGAGA AATTACTGAACCAAAAATATGACCTTGACGAGCTAGTCACGTGGGAGAAA GAAGTACGAGATTTGAGAATGTTGTTCAAATACTGCTCCAATGGAAAACA ATCTCGACCAGACTGTCCCTCCATTTTTGATAGAGTCCATCGTTATATGA AAGATTGGCAATGGCCAGCTTTGAGGGGAGAATTTTTCCGGCGTTTTAAA GCTCCAATTCGTACGGCTTTTCAATCAATGGTCATGTTGATGTTTTCTTC CATGACCAAACGACCCTGGGTTAAAACATACAAAGAAGCAAATGACTGGT ATGATAATATCAGCCATGAATATTCAGAAGTCGGGAAATTTTATGCTGAT TTCTCAAAGAAAATCCACGAAGAGCGATCATGGGATTTTTCCGCACCTGA AGTTTGTCAATACCGTAGATTCATGTGGAAAGATTTTGAACAACCTGCTT GTGAAACCAGATGGCGCGAAACCGACCCACCTGGTGGCCCTAAGAACAAG CGATCAGCTGTCAATCATTTCATCGAATCCGAACGGGAAGTAAATATCCC AATTGGGTTAAAACAACGCGAGAAAAGATCAACTGATAAACAGCTTCTAA GCAAAGCTCGAAAGTCAGATGCATCTCATGATTTAAGTGAAATGCCTAAA AAGAGAGAAAAAGATGACGATGATGACGATGATGACGACGACGATGATGA TAAATCCTCAGATAGCTCCAATAGCAGCGAAGAAGAAGAAAAAGATCCAT TTTTCAAAGCATTCGCTGGCAATAGTCAAGACCAGGAAATCAAGATTGGT GGGTTCGCATCCGACTTTGAATTTATCATGAAAGGGCGCTTCAAAGATGA AACAGCTGGCAAGGAGATAATTGTTGATCAACGCTACATCAATGTGCGCG AGACAACGAAAGGGGAAGTTATCGAAGAGATGATTAGCGAGGCTTACGCA AAACGAACCGAATTAGTGAAATCGAAAGTTGCCGAGATGGATAAATATGT TCAAGATACATACGGAACTATGCGTAAAGCTGAACTCCTCTTTTTGAAAA ATGTTAAGAAACAAATTAAGAAATGGCAATCAAAAAATAATATTTATATT CCACAATAGACATTCTCGAGAGATGAGAATAATCATAAATTATTAGTAAT TAGAAATTTCAAGACCTGCTTAATGAAAAATAAACTTCATTTAGGATTTA CAGTCAATTCTCGCTAATTCGAACCCAACAGGGAATCTTCGAATTAAAGA GAGTATTTTAAGAGGGTTTCTACCTGACGGGAATAAGTTCGAATTATAGA AGATCGAATAAGCGAGAGTCGACTGTACTGTACTTCAAATATCCTGTCCA CTTTGTCGTAATTTTGTGCTCTAAAAAAGGGAACAGAGCGTTAGTTAGTA CTCATAAAAAGAAAGTTTCTTTCCTTAGTAAAATTTCTTTATTTTGTCTA GCTGACATAACATTTACTTAATGGGATTTCACTTCTTAATGCGCAAAATA ACAAAATTTTTATCCGCTTTAAAATACTCAGTTGCAAAATTTGAAACTTT TAAGTTTATAATCTTATATAAGAGTTCCAACAAAAGAAAACCGCTGTTAC TCTGTTTTTGTAGAATGAAAAGCTAATCTGAAAAACAGGTCACATTCTAG GTACAGATTTTGATTTTAGGTTAGAACCAATTTTTTTCATTTTTTGTTTA TTTAATGAAACACATGAAATTCATTTAAAGGTATTGTTTTTAGATAAGAG TGATATCGTTTGCTTACTCATCGATTTAAATTCACAAGCTTTTTACATTG GATTGGCACGGATGTGGAGCAAGATTGTTCAGAAAGATTATGCTTATATC AGCATAATATAACACTAGGCAATAACTGTCCTGATATGAAACATGTGCCT GATATGAAACGGGCTTATATAAAAATAAAACCTTTAACGAGAGATTGCCG ATTTTAAAGAATCCAAATTTTAGATATGGAGGAATTGATTTTAATAAGAG TGAGAAGAGTTTGTAATTTGTAGGTCAAGTATATTGTAAATAGCATTACA CGTACCCAGTCCTTTGTTATTTGTTATTTTATACAGTGAAGTCTCTTTTT TGTGGTTTTTCGTGAAAATCAGCGAAAAAAAACAGTTAGGTTACACATCA GGTTAGAAACTTCATCATAGTACCCTTCATGTTCAGTCATTTGTTTGGTC GTTTTCTGTCGGCTAATGCGATCTAAAAATTATGGTAATTTTAGGACATG CCATAACTTACCGAGTCGAGTTATAAAGGTCCGAGTTAAAAAGACTCAAC TGTGCATGAATATGATAGTTCTCACGATTGTTATCAATAAAATCAAAGAG TGATAGACGAGGGTCTGGGTACGAGATTGTAAGATTTTTTATTATTTTCA CCTCTCCACGATACCCTATATTTAAGGACGTCCCTATATTTAAGGTCCGG ACCGTCCTTATATTTTTCCGTCGGAAAACACAGATATCTATATTTCTCCT ATCCAGTAGATTAAATGAAGATCAGTGGGGAAAATGGTCCTTAAATATGG GGTAACATGCCGTACTGGTTGAGGAATTAAACATTGTAAGATAGGTCAAA CTTATTTTCCTGATTCAAAATCATACAATTTAGATGGAAATTCTTTTTTA ACCTCTTTCGGACAATAATAGTCATAATACAATTGCTAAATTTTGAACTT TGAATTTTTGTCGTATTTTGATTACCGCAATATTGCCATTCAACTTACTT ACTGAGTGATAAGACTTTATCATATGTTGTAAACTTTTTTTATAAGAACC ATATGTTCTTAACTTTATGTGTTTTAAGCCAAAA

Coding sequence (CDS) from alignment at sc0000002:212930..216763-

>TCONS_00000513 ID=TCONS_00000513|Name=TCONS_00000513|organism=Clytia hemisphaerica|type=CDS|length=3996bp|location=Sequence derived from alignment at sc0000002:212930..216763- (Clytia hemisphaerica)
ATGATTCAATTTGGAAATACTCCATGGATGAAGCCGAGAAATTACTGAAC
CAAAAATATGACCTTGACGAGCTAGTCACGTGGGAGAAAGAAGTACGAGA
TTTGAGAATGTTGTTCAAATACTGCTCCAATGGAAAACAATCTCGACCAG
ACTGTCCCTCCATTTTTGATAGAGTCCATCGTTATATGAAAGATTGGCAA
TGGCCAGCTTTGAGGGGAGAATTTTTCCGGCGTTTTAAAGCTCCAATTCG
TACGGCTTTTCAATCAATGGTCATGTTGATGTTTTCTTCCATGACCAAAC
GACCCTGGGTTAAAACATACAAAGAAGCAAATGACTGGTATGATAATATC
AGCCATGAATATTCAGAAGTCGGGAAATTTTATGCTGATTTCTCAAAGAA
AATCCACGAAGAGCGATCATGGGATTTTTCCGCACCTGAAGTTTGTCAAT
ACCGTAGATTCATGTGGAAAGATTTTGAACAACCTGCTTGTGAAACCAGA
TGGCGCGAAACCGACCCACCTGGTGGCCCTAAGAACAAGCGATCAGCTGT
CAATCATTTCATCGAATCCGAACGGGAAGTAAATATCCCAATTGGGTTAA
AACAACGCGAGAAAAGATCAACTGATAAACAGCTTCTAAGCAAAGCTCGA
AAGTCAGATGCATCTCATGATTTAAGTGAAATGCCTAAAAAGAGAGAAAA
AGATGACGATGATGACGATGATGACGACGACGATGATGATAAATCCTCAG
ATAGCTCCAATAGCAGCGAAGAAGAAGAAAAAGATCCATTTTTCAAAGCA
TTCGCTGGCAATAGTCAAGACCAGGAAATCAAGATTGGTGGGTTCGCATC
CGACTTTGAATTTATCATGAAAGGGCGCTTCAAAGATGAAACAGCTGGCA
AGGAGATAATTGTTGATCAACGCTACATCAATGTGCGCGAGACAACGAAA
GGGGAAGTTATCGAAGAGATGATTAGCGAGGCTTACGCAAAACGAACCGA
ATTAGTGAAATCGAAAGTTGCCGAGATGGATAAATATGTTCAAGATACAT
ACGGAACTATGCGTAAAGCTGAACTCCTCTTTTTGAAAAATGTTAAGAAA
CAAATTAAGAAATGGCAATCAAAAAATAATATTTATATTCCACAATAGAG
CCTATGATTAAAATGGAATGGTTATTTTGGCTTATGGCTACTGCAGCTCT
GGTAAATTTCGGATATGGGTTGAAAAGTAGTGCTGATATTTATGCCAAAC
TTGTTGACGTCATCAAAGATAAAAGTGCCGACGCCGAAAATGATTTTCTG
GATAAACATTACTTCACTGAAAATAAAAATGCATGATTCAATTTGGAAAT
ACTCCATGGATGAAGCCGAGAAATTACTGAACCAAAAATATGACCTTGAC
GAGCTAGTCACGTGGGAGAAAGAAGTACGAGATTTGAGAATGTTGTTCAA
ATACTGCTCCAATGGAAAACAATCTCGACCAGACTGTCCCTCCATTTTTG
ATAGAGTCCATCGTTATATGAAAGATTGGCAATGGCCAGCTTTGAGGGGA
GAATTTTTCCGGCGTTTTAAAGCTCCAATTCGTACGGCTTTTCAATCAAT
GGTCATGTTGATGTTTTCTTCCATGACCAAACGACCCTGGGTTAAAACAT
ACAAAGAAGCAAATGACTGGTATGATAATATCAGCCATGAATATTCAGAA
GTCGGGAAATTTTATGCTGATTTCTCAAAGAAAATCCACGAAGAGCGATC
ATGGGATTTTTCCGCACCTGAAGTTTGTCAATACCGTAGATTCATGTGGA
AAGATTTTGAACAACCTGCTTGTGAAACCAGATGGCGCGAAACCGACCCA
CCTGGTGGCCCTAAGAACAAGCGATCAGCTGTCAATCATTTCATCGAATC
CGAACGGGAAGTAAATATCCCAATTGGGTTAAAACAACGCGAGAAAAGAT
CAACTGATAAACAGCTTCTAAGCAAAGCTCGAAAGTCAGATGCATCTCAT
GATTTAAGTGAAATGCCTAAAAAGAGAGAAAAAGATGACGATGATGACGA
TGATGACGACGACGATGATGATAAATCCTCAGATAGCTCCAATAGCAGCG
AAGAAGAAGAAAAAGATCCATTTTTCAAAGCATTCGCTGGCAATAGTCAA
GACCAGGAAATCAAGATTGGTGGGTTCGCATCCGACTTTGAATTTATCAT
GAAAGGGCGCTTCAAAGATGAAACAGCTGGCAAGGAGATAATTGTTGATC
AACGCTACATCAATGTGCGCGAGACAACGAAAGGGGAAGTTATCGAAGAG
ATGATTAGCGAGGCTTACGCAAAACGAACCGAATTAGTGAAATCGAAAGT
TGCCGAGATGGATAAATATGTTCAAGATACATACGGAACTATGCGTAAAG
CTGAACTCCTCTTTTTGAAAAATGTTAAGAAACAAATTAAGAAATGGCAA
TCAAAAAATAATATTTATATTCCACAATAGAGCCTATGATTAAAATGGAA
TGGTTATTTTGGCTTATGGCTACTGCAGCTCTGGTAAATTTCGGATATGG
GTTGAAAAGTAGTGCTGATATTTATGCCAAACTTGTTGACGTCATCAAAG
ATAAAAGTGCCGACGCCGAAAATGATTTTCTGGATAAACATTACTTCACT
GAAAATAAAAATGCATGATTCAATTTGGAAATACTCCATGGATGAAGCCG
AGAAATTACTGAACCAAAAATATGACCTTGACGAGCTAGTCACGTGGGAG
AAAGAAGTACGAGATTTGAGAATGTTGTTCAAATACTGCTCCAATGGAAA
ACAATCTCGACCAGACTGTCCCTCCATTTTTGATAGAGTCCATCGTTATA
TGAAAGATTGGCAATGGCCAGCTTTGAGGGGAGAATTTTTCCGGCGTTTT
AAAGCTCCAATTCGTACGGCTTTTCAATCAATGGTCATGTTGATGTTTTC
TTCCATGACCAAACGACCCTGGGTTAAAACATACAAAGAAGCAAATGACT
GGTATGATAATATCAGCCATGAATATTCAGAAGTCGGGAAATTTTATGCT
GATTTCTCAAAGAAAATCCACGAAGAGCGATCATGGGATTTTTCCGCACC
TGAAGTTTGTCAATACCGTAGATTCATGTGGAAAGATTTTGAACAACCTG
CTTGTGAAACCAGATGGCGCGAAACCGACCCACCTGGTGGCCCTAAGAAC
AAGCGATCAGCTGTCAATCATTTCATCGAATCCGAACGGGAAGTAAATAT
CCCAATTGGGTTAAAACAACGCGAGAAAAGATCAACTGATAAACAGCTTC
TAAGCAAAGCTCGAAAGTCAGATGCATCTCATGATTTAAGTGAAATGCCT
AAAAAGAGAGAAAAAGATGACGATGATGACGATGATGACGACGACGATGA
TGATAAATCCTCAGATAGCTCCAATAGCAGCGAAGAAGAAGAAAAAGATC
CATTTTTCAAAGCATTCGCTGGCAATAGTCAAGACCAGGAAATCAAGATT
GGTGGGTTCGCATCCGACTTTGAATTTATCATGAAAGGGCGCTTCAAAGA
TGAAACAGCTGGCAAGGAGATAATTGTTGATCAACGCTACATCAATGTGC
GCGAGACAACGAAAGGGGAAGTTATCGAAGAGATGATTAGCGAGGCTTAC
GCAAAACGAACCGAATTAGTGAAATCGAAAGTTGCCGAGATGGATAAATA
TGTTCAAGATACATACGGAACTATGCGTAAAGCTGAACTCCTCTTTTTGA
AAAATGTTAAGAAACAAATTAAGAAATGGCAATCAAAAAATAATATTTAT
ATTCCACAATAGAGCCTATGATTAAAATGGAATGGTTATTTTGGCTTATG
GCTACTGCAGCTCTGGTAAATTTCGGATATGGGTTGAAAAGTAGTGCTGA
TATTTATGCCAAACTTGTTGACGTCATCAAAGATAAAAGTGCCGACGCCG
AAAATGATTTTCTGGATAAACATTACTTCACTGAAAATAAAAATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000317XLOC_000317Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000513-proteinTCONS_00000513-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000513-exon-sc0000002-1575043694:216720..216763TCONS_00000513-exon-sc0000002-1575043694:216720..216763Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1575043694:216298..216477TCONS_00000513-exon-sc0000002-1575043694:216298..216477Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1575043694:212930..215802TCONS_00000513-exon-sc0000002-1575043694:212930..215802Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1510915933:216720..216763TCONS_00000513-exon-sc0000002-1510915933:216720..216763Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1510915933:216298..216477TCONS_00000513-exon-sc0000002-1510915933:216298..216477Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1510915933:212930..215802TCONS_00000513-exon-sc0000002-1510915933:212930..215802Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1491911889:216720..216763TCONS_00000513-exon-sc0000002-1491911889:216720..216763Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1491911889:216298..216477TCONS_00000513-exon-sc0000002-1491911889:216298..216477Clytia hemisphaericaexon
TCONS_00000513-exon-sc0000002-1491911889:212930..215802TCONS_00000513-exon-sc0000002-1491911889:212930..215802Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:212930..216763 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.331683 0.354601 0.351929 0.246419 1.66147 1.15799 21.2611 22.5412 7.66648 5.89183 13.454 9.58337 12.6271 9.09558 8.06335 21.8864 9.48702 10.4507 0.328808 0.331323 5.51761 5.70942 4.50835 4.34547 7.75659 8.45567 0.98409 0.414134 0.522478 0.323257
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000513 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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