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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000512 ID=TCONS_00000512|Name=TCONS_00000512|organism=Clytia hemisphaerica|type=transcript|length=708bp TATTTAAAGGTTTCAAACAAGTGCATTTGACTGAAGtctgttaaccaatc aaattcaaGAAAGCTTTACAACCAGCCAatcagaatgttgaaaaagataA CAAGCGAGCCAATCATATTTCTTTATGCCACCGTGTACATGATCAACTTG TCCATTCTGCCACAGTTggttcttcaaaaagtttgtttacaaaaacatta tggaaattcaactctgtgtggtGAAAAATCTGGGTTGGCAATCACACAAG AGATGAAGAAGGAAACGTCTCATTGGTGGTTCGCTATCCTTGCTTCATCT CAAATTCCCGCCATTTTTACCGTTCTCATCTGGGGACCAATCAGCGACGC GATCGGTCGGAAGAAAGCAATGTTGTTGATTCCAATAATGAGTATTTTGC AGAATATTGTTTTCCTGTTATGCTCCTATTATATCAATTCTTCGATCATT TATTTGTGTTTTGGAATGTTTTTGGCGTGTTTTTTTGGAGAATTTCCAGG AGTACTAGCTTTATCCTGTGCATTCATTGCAGATGTTACAGCGGGTCTAA AAGCTAAATCTCGAGTCACTAGAATGGCGCTTATAGATTGTGCTGTTAAT CTAGCTGGGTTACCTGCAGGGCTTTTCGCTGGTCAGCTTTTAAAACATCT AGGATTCACAGCTGTCTTTGGACTTTCGATCGGAATCAATCTGTTGTTGT TAGCTTAC Run BLAST on NCBI transcript from alignment at sc0000002:209065..210774- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000512 ID=TCONS_00000512|Name=TCONS_00000512|organism=Clytia hemisphaerica|type=transcript|length=1710bp|location=Sequence derived from alignment at sc0000002:209065..210774- (Clytia hemisphaerica) TATTTAAAGGTTTCAAACAAGTGCATTTGACTGAAGTCTGTTAACCAATC
AAATTCAAGAAAGCTTTACAACCAGCCAATCAGAATGTTGAAAAAGATAA
CAAGCGAGCCAATCATATTTCTTTATGCCACCGTGTACATGATCAACTTG
TCCATTCTGCCACAGTTGGTTCTTCAAAAAGTTTGTTTACAAAAACATTA
TGGAAATTCAACTCTGTGTGGTGAAAAATCTGGGTTGGCAATCACACAAG
AGATGAAGAAGGTAAAATTTCAACACATCTCAACTCATATTAGACTTAGA
CTGGCACGCCAGTCGGGCTGGAACGGTATCACGCGGGAAAAGTGAGCGTA
GGAGTTAGGTAAGCGTAAGAAGAAATTCATTTGTCGGTGGCAAGGGCTGA
AATCCCTTAATCAGCAGCCTCTCACCAAGTTTTGATCGTTCTTCTACGCA
GCTCCTATTCTAGCAAACGCCCGCTGCCTTTATGCTCCCGCCCTCTGACA
TGATTAATTAACAGACTAGTTTGCTAGTCTAACTAGACTATACTCCTGGT
GGGGGGGGGTACTTAGACAAAATTGGGTACGGGGACTTGTTGCTGGTCAG
GGTCCCTTTTCTAGGCTCTGAAGAAATCAGTAATAGAGTCCCAAGTTTAA
TAGTTTTCAAGATTTGTACCTGACAGGGTCAACTTTTGGTTATTTTGTAT
GATTTTCAAGGTGAAATTAGAGCATTTTTCAATTTTTCGTCTCAGTAATT
TTTGCAACTTTTCAGGTTCCCATATTTACCAAACATTCATATCTTACAGG
TTCTAGTTTTAAGCTCCAGAGGCATTCCCCGTCGGCCGTCAAGGTCTTCC
CCCGGGCTTATGCTATAGTCTAACACTTTGTCACCTTCTGAAAAATAATA
TCCAAGGCGAAGAAAATTCGTGAACGGGTTTTGCTTTCAAAGCGAGTTTA
AAGCCGTAGAGTATGCAATGTTGATTAGTCCGAAAAGGGCGTGCAGGTTG
TACAGACAGGGACAGACAGAAACCTACCTAGGCAAAAGCATAGGCTTTGC
AGATATACTGCAAAGATCACGGCACAAAACCCACGTCCGATCTTTTAATA
AAATATAGAAAAATGACACAATCTTACGCATATCGAGAATCTTCGCTAAA
AATGAGTTTGCGAGTTTGAGGCTCAAATCAAATCTATCTATCAGGTTTAT
AAGTCTTGTGTGTTGAAATTTTGTTATTACATTTCACAATTTTATGATAT
TATTGAATTTTAGGAAACGTCTCATTGGTGGTTCGCTATCCTTGCTTCAT
CTCAAATTCCCGCCATTTTTACCGTTCTCATCTGGGGACCAATCAGCGAC
GCGATCGGTCGGAAGAAAGCAATGTTGTTGATTCCAATAATGAGTATTTT
GCAGAATATTGTTTTCCTGTTATGCTCCTATTATATCAATTCTTCGATCA
TTTATTTGTGTTTTGGAATGTTTTTGGCGTGTTTTTTTGGAGAATTTCCA
GGAGTACTAGCTTTATCCTGTGCATTCATTGCAGATGTTACAGCGGGTCT
AAAAGCTAAATCTCGAGTCACTAGAATGGCGCTTATAGATTGTGCTGTTA
ATCTAGCTGGGTTACCTGCAGGGCTTTTCGCTGGTCAGCTTTTAAAACAT
CTAGGATTCACAGCTGTCTTTGGACTTTCGATCGGAATCAATCTGTTGTT
GTTAGCTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00000512-exon-sc0000002-1575043694:210514..210774 | TCONS_00000512-exon-sc0000002-1575043694:210514..210774 | Clytia hemisphaerica | exon |
TCONS_00000512-exon-sc0000002-1575043694:209065..209511 | TCONS_00000512-exon-sc0000002-1575043694:209065..209511 | Clytia hemisphaerica | exon |
TCONS_00000512-exon-sc0000002-1510915933:210514..210774 | TCONS_00000512-exon-sc0000002-1510915933:210514..210774 | Clytia hemisphaerica | exon |
TCONS_00000512-exon-sc0000002-1510915933:209065..209511 | TCONS_00000512-exon-sc0000002-1510915933:209065..209511 | Clytia hemisphaerica | exon |
TCONS_00000512-exon-sc0000002-1491911889:210514..210774 | TCONS_00000512-exon-sc0000002-1491911889:210514..210774 | Clytia hemisphaerica | exon |
TCONS_00000512-exon-sc0000002-1491911889:209065..209511 | TCONS_00000512-exon-sc0000002-1491911889:209065..209511 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000002 | supercontig | sc0000002:209065..210774 - |
Blast
The following BLAST results are available for this feature:
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