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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000462 ID=TCONS_00000462|Name=TCONS_00000462|organism=Clytia hemisphaerica|type=transcript|length=1404bp CACCACTTGAAGCTGTTTCTTGTTGAACTGTTGGTGATAATGGTAACGGT TTGTTTGCAAAGCATTCTGGGATCGCATCATAAGCACCACCGTTATTATT CACGACATTGTATCCAGCCGGGAGGGTTGTACCTTTTTCGCGACATCGGT TAAAAGCTGCTTGTGGTTCATAATTTTGGTTGATGTTATTGACTGGTTGG TAGCTCTCGTAAATTTCTTCCTGTTGTTGAAGGCTATTGACAGATGGTGG AATATCATAAACATCGTCTTCTAGGTGATCCATTCCTGGCTCTAATGGTA ACGATTTAAGTTGAATGGACTCTGAGTTCGTCCTTGGTAAAGGTTTCATT TGAATAGTTTCTGAGAGAGTTCTTTGAGGAGGTGCATCGTATATATCATC TTGTGTGAGACATTGTTGTTGACTTCTGTTCGGCACACAATCATAAATTT CGTCTTGGTTAAGCTCTTCATTTAAAGAGGTCATTGTTGTATAAGTTGAC GAGTTCATTGTTGTGTAAGAAGTAGTAGGAGGGCTGTCATAGATTTCATC TACGGTCGAAGCCTTTGATAATTGATCGGGAGGGGAGTTGTAAACTTCAT CTTGTGCAGGGTATTGTGAGCATCTAGGATCTGGCCTTGATGGTAAGCAA TCATACATTTCTTCCGAGTCGACAGATTCTTTTTGATTAGTGGTAGGAGG GCAATCATAAATTTCTTCTGTAAACTGCATGTTCTCATTAATTATATTCT CAGATAGTTCTGGTTGTTTTCGTAGTCCAGCATTAGAAGGAGGAGAATCG TAAATGTCATCTTGTTGGGAATCTATTTTTTGAGTTGTTTGTCTTGACGG AGGTGCATCATAAATATCATCAGTGTTTTCATCAAAAGAGTCGGGTATAT GTTTAGGTGAGTATCTGCTGATCCTTGAGTTTGTCGGTGGACAGTCGTAA ATATCATCCGACGAAAACGTTTCTGTCGGTTTATATTGTCGAGTATTTGA CGGTGGACAGTCATATATATCATCCGTTTCTGGTTCTGCAAATGGTATTG GTGAACTTTGAGGTTTCATTGCATTTGTTGATGAAGGGGGACAACCATAA ATCACATCTTCTTCGAGCTGTTGTTGATTCAGATTCTGTTTCTGGCAAAC AGGAGGGGAATCGTAAAGATCTTCTTCAATAAGTGAATTCTGTTGAaatc cattttgaatttttggtgaTTCTGTTGTAAGATTGCCGTATATTGCATCC TCGCCTTCATCGAGTTCATCAGGTTGACCTGCATATGATTGGTGAGGTAC TGGCACCATCTGATCGGTGACACCTGATTGTGGACGTGGTGGTAGAGGAT CGTATCCTTTTATTCCGTTATTTGAAATCATGGAGGAATTCAATTCGTCA CCTG Run BLAST on NCBI transcript from alignment at sc0000002:1042821..1044338+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000462 ID=TCONS_00000462|Name=TCONS_00000462|organism=Clytia hemisphaerica|type=transcript|length=1518bp|location=Sequence derived from alignment at sc0000002:1042821..1044338+ (Clytia hemisphaerica) CACCACTTGAAGCTGTTTCTTGTTGAACTGTTGGTGATAATGGTAACGGT
TTGTTTGCAAAGCATTCTGGGATCGCATCATAAGCACCACCGTTATTATT
CACGACATTGTATCCAGCCGGGAGGGTTGTACCTTTTTCGCGACATCGGT
TAAAAGCTGCTTGTGGTTCATAATTTTGGTTGATGTTATTGACTGGTTGG
TAGCTCTCGTAAATTTCTTCCTGTTGTTGAAGGCTATTGACAGATGGTGG
AATATCATAAACATCGTCTTCTAGGTGATCCATTCCTGGCTCTAATGGTA
ACGATTTAAGTTGAATGGACTCTGAGTTCGTCCTTGGTAAAGGTTTCATT
TGAATAGTTTCTGAGAGAGTTCTTTGAGGAGGTGCATCGTATATATCATC
TTGTGTGAGACATTGTTGTTGACTTCTGTTCGGCACACAATCATAAATTT
CGTCTTGGTTAAGCTCTTCATTTAAAGAGGTCATTGTTGTATAAGTTGAC
GGCGGTGGACAGTCGTAGATATCATCACGAGTTAAAGCTTGTTTTGACTG
TAAAGTTTGTCTGGTCGGTGGCGAATCATAAACTTCATCAGATTGTGCTA
ATTGTGATTTTAAAGAGTTCATTGTTGTGTAAGAAGTAGTAGGAGGGCTG
TCATAGATTTCATCTACGGTCGAAGCCTTTGATAATTGATCGGGAGGGGA
GTTGTAAACTTCATCTTGTGCAGGGTATTGTGAGCATCTAGGATCTGGCC
TTGATGGTAAGCAATCATACATTTCTTCCGAGTCGACAGATTCTTTTTGA
TTAGTGGTAGGAGGGCAATCATAAATTTCTTCTGTAAACTGCATGTTCTC
ATTAATTATATTCTCAGATAGTTCTGGTTGTTTTCGTAGTCCAGCATTAG
AAGGAGGAGAATCGTAAATGTCATCTTGTTGGGAATCTATTTTTTGAGTT
GTTTGTCTTGACGGAGGTGCATCATAAATATCATCAGTGTTTTCATCAAA
AGAGTCGGGTATATGTTTAGGTGAGTATCTGCTGATCCTTGAGTTTGTCG
GTGGACAGTCGTAAATATCATCCGACGAAAACGTTTCTGTCGGTTTATAT
TGTCGAGTATTTGACGGTGGACAGTCATATATATCATCCGTTTCTGGTTC
TGCAAATGGTATTGGTGAACTTTGAGGTTTCATTGCATTTGTTGATGAAG
GGGGACAACCATAAATCACATCTTCTTCGAGCTGTTGTTGATTCAGATTC
TGTTTCTGGCAAACAGGAGGGGAATCGTAAAGATCTTCTTCAATAAGTGA
ATTCTGTTGAaatccattttgaatttttggtgaTTCTGTTGTAAGATTGC
CGTATATTGCATCCTCGCCTTCATCGAGTTCATCAGGTTGACCTGCATAT
GATTGGTGAGGTACTGGCACCATCTGATCGGTGACACCTGATTGTGGACG
TGGTGGTAGAGGATCGTATCCTTTTATTCCGTTATTTGAAATCATGGAGG
AATTCAATTCGTCACCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00000462-exon-sc0000002-1491911889:1042821..1043321 | TCONS_00000462-exon-sc0000002-1491911889:1042821..1043321 | Clytia hemisphaerica | exon |
TCONS_00000462-exon-sc0000002-1510915933:1042821..1043321 | TCONS_00000462-exon-sc0000002-1510915933:1042821..1043321 | Clytia hemisphaerica | exon |
TCONS_00000462-exon-sc0000002-1575043694:1042821..1043321 | TCONS_00000462-exon-sc0000002-1575043694:1042821..1043321 | Clytia hemisphaerica | exon |
TCONS_00000462-exon-sc0000002-1491911889:1043436..1044338 | TCONS_00000462-exon-sc0000002-1491911889:1043436..1044338 | Clytia hemisphaerica | exon |
TCONS_00000462-exon-sc0000002-1510915933:1043436..1044338 | TCONS_00000462-exon-sc0000002-1510915933:1043436..1044338 | Clytia hemisphaerica | exon |
TCONS_00000462-exon-sc0000002-1575043694:1043436..1044338 | TCONS_00000462-exon-sc0000002-1575043694:1043436..1044338 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000002 | supercontig | sc0000002:1042821..1044338 + |
Blast
The following BLAST results are available for this feature:
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