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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000425 ID=TCONS_00000425|Name=TCONS_00000425|organism=Clytia hemisphaerica|type=transcript|length=1602bp
GTGAAACTTTATTGAGCAGAGGTTGTCCTATATCTTATactatttttctc
attttctgaCTGCCTGAAACTGGTTTAATGTCGAAAAACCCATCTTATGC
TGTCACctttattttttatactttcagaaatgtaacaaaaaataaaaaaa
cgaaaTTGCAAAAATTGTATAAAAGGTTCTCCTATTCCCTGGTATATCAA
ACAGGGAAGGAGAAAAAAGGAGAATTataccaacaaaacaaaaatggcta
CAATAAACAAAGACAGTGAAGAGGCAAGTGAGAAGCCGGTCAATAAAATC
TTGAATGCACATCGGCCTTTACAACCTTGCAAAAGCGCTGCTGGTCGATT
ACAAGatgagaaatataaatcaacaaACGACATGGTCAAATCTTCATCAG
AGTTATCTGTTAATGATATAATGCCCAGGAGACGTTCTAGATCAGCTCCT
CTAACATTAGAGGCATCCATAGTAGCTACTGAACTAACACGTTTAAGTGA
TGCACTTGCAACTAAATACACTTTACAGAAAGTATCTGTTTTGAATAGGA
TTCGAAGACACACTCTTGCTTCACCAAGTGAAAGGGAGCACGATAGGAGA
TCTTTTCATTTTGATTACCACAATTACCAGAAccttcaaattgaaaattt
aacaatCGAAGAAGGAGAGGAAACTCCTCCTGAATATCAACGTGGAACAT
CAGTTTAAGCAAtgaatttgttgattttttggaaatatttagTTTTTTCA
ATATACATGACAGTCTGATTTTGGATGTCATTGACAATTTAGACTGTTAT
TATTAATTGAAATGATGGGTCTATATACGTATACACCAAACAAATTTTTA
GATTGTTTTACCGTAtagtaaatatgatatttttaCTTGCAtattttttg
tacttttggTACAGTTTCATCTAATACGTCGGTCGTCGGTCGCGTTGTAC
ACTTTTTGACTGCTCAATGGAACATTTTGCAGCATTTTTGTAAATTGTTC
AGCATTTGTACATTATGATAAATTATGATATAAGCCGTATTTTGTACATA
AAATTTGagtattttcgccattttgcgttgattttttttcagacttGAAT
AATAATTTATTTCTTCAGTAAAAACACACTTCAGAgatataattttcttc
tttaggGAAAACTTTTAACTATGCTTAACATTATTGTAGCCTGCTCCTTT
CAGATTTATTTAACCCGGCTGCAAATGAGCTTGAACGTACTATGAAAATG
TTAAGTTTCAGCTGGAGTTAGATATAAAATGGATAATTGATTTTCAAGAA
ATGTTTGCATTTTGTGTTAGGAAAGTTAGGTTAATATATTTGTAATATAG
GCGTATTTTAGTATATAGCTAATTATTTTCGAATCCTTTTATTTTACTAG
TCATGTTATTgtagttattttgatttttgtagaatagataattattattt
tgaaaaaaaatttcaaaatctataGATAGGCGATACTCTCTCcgaaatat
tttctattttgagaattttgatttgatcatcTTATCTCACTATTATTGTC
TATGTTACTGGTTCAATATGGCAAAGGTTTCAGAgactttccaatttttt
tc Run BLAST on NCBI transcript from alignment at sc0000002:263262..265673+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000425 ID=TCONS_00000425|Name=TCONS_00000425|organism=Clytia hemisphaerica|type=transcript|length=2412bp|location=Sequence derived from alignment at sc0000002:263262..265673+ (Clytia hemisphaerica)
GTGAAACTTTATTGAGCAGAGGTTGTCCTATATCTTATactatttttctc
attttctgaCTGCCTGAAACTGGTTTAATGTCGAAAAACCCATCTTATGC
TGTCACctttattttttatactttcagaaatgtaacaaaaaataaaaaaa
cgaaaTTGCAAAAATTGTATAAAAGGTTCTCCTATTCCCTGGTATATCAA
ACAGGGAAGGAGAAAAAAGGAGAATTataccaacaaaacaaaaatggcta
CAATAAACAAAGACAGTGAAGAGGCAAGTGAGAAGCCGGTCAATAAAATC
TTGAATGCACATCGGCCTTTACAACCTTGCAAAAGCGCTGCTGGTCGATT
ACAAGatgagaaatataaatcaacaaACGACATGGTCAAATCTTCATCAG
AGTTATCTGTTAATGATATAATGCCCAGGAGACGTTCTAGATCAGCTCCT
CTAACATTAGAGGCATCCATAGTAGCTACTGAACTAACACGTTTAAGTGA
TGCACTTGCAACTAAATACACTTTACAGAAAGTATCTGTTTTGAATAGGA
TTCGAAGACACACTCTTGCTTCACCAAGTGAAAGGGAGCACGATAGGAGA
TCTTTTCATTTTGATTACCACAATTACCAGAAccttcaaattgaaaattt
aacaatCGAAGAAGGAGAGGAAACTCCTCCTGAATATCAACGTGGAACAT
CAGTTTAAGCAAtgaatttgttgattttttggaaatatttagTTTTTTCA
ATATACATGACAGTCTGATTTTGGATGTCATTGACAATTTAGACTGTTAT
TATTAATTGAAATGATGGGTCTATATACGTATACACCAAACAAATTTTTA
GATTGTTTTACCGTAtagtaaatatgatatttttaCTTGCAtattttttg
tacttttggTACAGTTTCATCTAATACGTCGGTCGTCGGTCGCGTTGTAC
ACTTTTTGACTGCTCAATGGAACATTTTGCAGCATTTTTGTAAATTGTTC
AGCATTTGTACATTATGATAAATTATGATATAAGCCGTATTTTGTACATA
AAATTTGagtattttcgccattttgcgttgattttttttcagacttGAAT
AATAATTTATTTCTTCAGTAAAAACACACTTCAGAgatataattttcttc
tttaggGAAAACTTTTAACTATGCTTAACATTATTGTAGCCTGCTCCTTT
CAGATTTATTTAACCCGGCTGCAAATGAGCTTGAACGTACTATGAAAATG
TTAAGTTTCAGCTGGAGTTAGATATAAAATGGATAATTGATTTTCAAGAA
ATGTTTGCATTTTGTGTTAGGAAAGTTAGGTTAATATATTTGTAATATAG
GCGTATTTTAGTATATAGCTNCCAGAAccttcaaattgaaaatttaacaa
tCGAAGAAGGAGAGGAAACTCCTCCTGAATATCAACGTGGAACATCAGTT
TAAGCAAtgaatttgttgattttttggaaatatttagTTTTTTCAATATA
CATGACAGTCTGATTTTGGATGTCATTGACAATTTAGACTGTTATTATTA
ATTGAAATGATGGGTCTATATACGTATACACCAAACAAATTTTTAGATTG
TTTTACCGTAtagtaaatatgatatttttaCTTGCAtattttttgtactt
ttggTACAGTTTCATCTAATACGTCGGTCGTCGGTCGCGTTGTACACTTT
TTGACTGCTCAATGGAACATTTTGCAGCATTTTTGTAAATTGTTCAGCAT
TTGTACATTATGATAAATTATGATATAAGCCGTATTTTGTACATAAAATT
TGagtattttcgccattttgcgttgattttttttcagacttGAATAATAA
TTTATTTCTTCAGTAAAAACACACTTCAGAgatataattttcttctttag
gGAAAACTTTTAACTATGCTTAACATTATTGTAGCCTGCTCCTTTCAGAT
TTATTTAACCCGGCTGCAAATGAGCTTGAACGTACTATGAAAATGTTAAG
TTTCAGCTGGAGTTAGATATAAAATGGATAATTGATTTTCAAGAAATGTT
TGCATTTTGTGTTAGGAAAGTTAGGTTAATATATTTGTAATATAGGCGTA
TTTTAGTATATAGCTAATTATTTTCGAATCCTTTTANAGGTTAATATATT
TGTAATATAGGCGTATTTTAGTATATAGCTAATTATTTTCGAATCCTTTT
ATTTTACTAGTCATGTTATTgtagttattttgatttttgtagaatagata
attattattttgaaaaaaaatttcaaaatctataGATAGGCGATACTCTC
TCcgaaatattttctattttgagaattttgatttgatcatcTTATCTCAC
TATTATTGTCTATGTTACTGGTTCAATATGGCAAAGGTTTCAGAgacttt
ccaatttttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000425-exon-sc0000002-1491911889:263262..264590 | TCONS_00000425-exon-sc0000002-1491911889:263262..264590 | Clytia hemisphaerica | exon |
| TCONS_00000425-exon-sc0000002-1510915933:263262..264590 | TCONS_00000425-exon-sc0000002-1510915933:263262..264590 | Clytia hemisphaerica | exon |
| TCONS_00000425-exon-sc0000002-1575043694:263262..264590 | TCONS_00000425-exon-sc0000002-1575043694:263262..264590 | Clytia hemisphaerica | exon |
| TCONS_00000425-exon-sc0000002-1491911889:265401..265673 | TCONS_00000425-exon-sc0000002-1491911889:265401..265673 | Clytia hemisphaerica | exon |
| TCONS_00000425-exon-sc0000002-1510915933:265401..265673 | TCONS_00000425-exon-sc0000002-1510915933:265401..265673 | Clytia hemisphaerica | exon |
| TCONS_00000425-exon-sc0000002-1575043694:265401..265673 | TCONS_00000425-exon-sc0000002-1575043694:265401..265673 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:263262..265673 + |
Blast
The following BLAST results are available for this feature:
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