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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000419 ID=TCONS_00000419|Name=TCONS_00000419|organism=Clytia hemisphaerica|type=transcript|length=1844bpRun BLAST on NCBI transcript from alignment at sc0000002:173991..199422+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00000419 ID=TCONS_00000419|Name=TCONS_00000419|organism=Clytia hemisphaerica|type=transcript|length=25432bp|location=Sequence derived from alignment at sc0000002:173991..199422+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00000419 vs. Swiss-Prot (Human)
Match: KI26B (Kinesin-like protein KIF26B OS=Homo sapiens GN=KIF26B PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.048e-67 Identity = 148/384 (38.54%), Postives = 227/384 (59.11%), Query Frame = 3
Query: 729 AMTSQFFVEAAXXXXXXXXXXXXXXXXXXXXXXXLFPTNFTNMLKQSSPSNPPGLFKYMGRRVD----GKVSVMLRVQPSI-NDQSDNS-LIEIDLRKKQISFLQP---NAPSSTPLDANQAPPPSQPKYFGFDNIFTPEERHDRISSGSLLDVLHAVINGGDGALVTYGGPGTGKTRTMVGQDGSSTTAGILPCAIAWLYSLIDDCKQRTGARISIRVSAVEVVGRNEELKDLLADQASGTDSIDSHSASPGIYLREDPVGGINLENVSEPQAANKEKAGFYLDAALASRSAEKD--NQGVTQNSHMIFTFHIYQYRVEKNARKIPSGSVPQYSGGRSRLHLIDL-SYVNQNFEEKTSQPSQAPSHAALGQIMITMLNGNKKV 1844
++ + FF AA+K N+ + + LF T+F+ +L+ S P PP L + + + D GKV VMLR+ ++ D S++S +++D RKKQI+ P ++ NQ PP K F FD +F + + +G++ +V+ +V+NG DG + +G GK+ TM+G+D S GI+PCAI+WL+ LI++ K++TGAR S+RVSAVEV G+ E L+DLL++ A+G+ SPG+YL EDP+ G L+N SE +A EKA F+LDAA+ASR + + ++ +NSH+ FT HIYQYR+EK+ + SGGRSRLHLIDL S V + + S +ALG +++ ++NG+K +
Sbjct: 381 SVAASFFARAAQKLNLSSKKKKHRPSTSSAAEPPLFATSFSGILQTSPPPAPPCLLRAVNKVKDTPGLGKVKVMLRICSTLARDTSESSSFLKVDPRKKQITLYDPLTCGGQNAFQKRGNQVPP----KMFAFDAVFPQDASQAEVCAGTVAEVIQSVVNGADGCVFCFGHAKLGKSYTMIGKDDSMQNLGIIPCAISWLFKLINERKEKTGARFSVRVSAVEVWGKEENLRDLLSEVATGS---LQDGQSPGVYLCEDPICGTQLQNQSELRAPTAEKAAFFLDAAIASRRSHQQDCDEDDHRNSHVFFTLHIYQYRMEKSGKG-------GMSGGRSRLHLIDLGSCVKALSKNREGGSGLCLSLSALGNVILALVNGSKHI 750 The following BLAST results are available for this feature:
BLAST of TCONS_00000419 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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