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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000319 ID=TCONS_00000319|Name=TCONS_00000319|organism=Clytia hemisphaerica|type=transcript|length=1050bp
taagtttagactaaCTGTCAGACAGCAAACAATTGTAGTTTTGCTCAAGA
GACTTTTAGTTAATACTTGGAGAATGGTTacacaaaatctttcaatcttT
GTACATATCAATCCATGccatatcaattttttttgtacgTAGCTAGGTGG
ATATACTGCGATAGCGATAGATGTTCTTTCGGTTGAATTAAGAATTTTAC
GCCCACCAAATCTGCTAATTGTAAAGTCATGGTATACTTGCTCTGGAAAT
TACTACATTGGTTAGGTTGCCATCATATGTAGTGCAGTGTAGTGAGTGGT
CTTTGGTTGGGACATACTGTATTTGTTATCACAGATATTGAAACCTTCTT
CGTTCCTCTTTCTTGTGGAAAACCAACATCACATCTTCCAAATGTTTACC
TCAAGAGCGattcaaaaaagtttgttttcaaCAGCTTCCCAAAGTTTGGT
AATTTGAATGGAATAATGTCAATGAAGAAccataaatttaaatttgaaga
aTCATTCATTCTGAAGATGCACTCAAACTTTCAACGAGGCTTCCAATTAT
CTCCGTTATTTAAAAACTTCATGAAACAGGTACGCTAATTACTACGGAGC
TAACAAGAATGTAAGGCAAATGCTACATGATAAGATTGCGTGGCGTAATA
TAAGGGAGATAATAGAACTGATGCAAGAATTGACGCGGGAAATAATTTCC
CGATTCCCCGAACATTTGATTCCGAATCGTGTGACTAAACTTGCACTTTT
TTGTCTTAAGGACGAGGAAAAGCACCGAGATTAATGGTCTCCTTCCACTT
AGCGTGGGGCGACCAACAACCAAAACTGAGCCCAAGAATTTTGCACGAAG
AGAACCATGAAGAAAAGCAACATACACAAAGAAGAGACTcatcaaataag
aaaaaagaaacaaaacatcttttcaaataaaaatttccactaGAAGTCAG
CCATTTTTCTTCCAATCACTCACTCCTCCAAATTCAAAATAACAAGATCA
GCGACTTTGACGGAAGTTTCCATTTCTCATTTCAGGAATCTCCCCCAAAG Run BLAST on NCBI transcript from alignment at sc0000001:1118914..1119963 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000319 ID=TCONS_00000319|Name=TCONS_00000319|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at sc0000001:1118914..1119963 (Clytia hemisphaerica)
CTTTGGGGGAGATTCCTGAAATGAGAAATGGAAACTTCCGTCAAAGTCGC
TGATCTTGTTATTTTGAATTTGGAGGAGTGAGTGATTGGAAGAAAAATGG
CTGACTTCtagtggaaatttttatttgaaaagatgttttgtttctttttt
cttatttgatgAGTCTCTTCTTTGTGTATGTTGCTTTTCTTCATGGTTCT
CTTCGTGCAAAATTCTTGGGCTCAGTTTTGGTTGTTGGTCGCCCCACGCT
AAGTGGAAGGAGACCATTAATCTCGGTGCTTTTCCTCGTCCTTAAGACAA
AAAAGTGCAAGTTTAGTCACACGATTCGGAATCAAATGTTCGGGGAATCG
GGAAATTATTTCCCGCGTCAATTCTTGCATCAGTTCTATTATCTCCCTTA
TATTACGCCACGCAATCTTATCATGTAGCATTTGCCTTACATTCTTGTTA
GCTCCGTAGTAATTAGCGTACCTGTTTCATGAAGTTTTTAAATAACGGAG
ATAATTGGAAGCCTCGTTGAAAGTTTGAGTGCATCTTCAGAATGAATGAt
tcttcaaatttaaatttatggTTCTTCATTGACATTATTCCATTCAAATT
ACCAAACTTTGGGAAGCTGttgaaaacaaacttttttgaatCGCTCTTGA
GGTAAACATTTGGAAGATGTGATGTTGGTTTTCCACAAGAAAGAGGAACG
AAGAAGGTTTCAATATCTGTGATAACAAATACAGTATGTCCCAACCAAAG
ACCACTCACTACACTGCACTACATATGATGGCAACCTAACCAATGTAGTA
ATTTCCAGAGCAAGTATACCATGACTTTACAATTAGCAGATTTGGTGGGC
GTAAAATTCTTAATTCAACCGAAAGAACATCTATCGCTATCGCAGTATAT
CCACCTAGCTAcgtacaaaaaaaattgatatggCATGGATTGATATGTAC
AaagattgaaagattttgtgtAACCATTCTCCAAGTATTAACTAAAAGTC
TCTTGAGCAAAACTACAATTGTTTGCTGTCTGACAGttagtctaaactta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000319-exon-sc0000001-1491911889:1118914..1119963 | TCONS_00000319-exon-sc0000001-1491911889:1118914..1119963 | Clytia hemisphaerica | exon |
| TCONS_00000319-exon-sc0000001-1510915933:1118914..1119963 | TCONS_00000319-exon-sc0000001-1510915933:1118914..1119963 | Clytia hemisphaerica | exon |
| TCONS_00000319-exon-sc0000001-1575043694:1118914..1119963 | TCONS_00000319-exon-sc0000001-1575043694:1118914..1119963 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1118914..1119963 . |
Blast
The following BLAST results are available for this feature:
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