TCONS_00000316 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000316
Unique NameTCONS_00000316
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000316 ID=TCONS_00000316|Name=TCONS_00000316|organism=Clytia hemisphaerica|type=transcript|length=120bp
GTTGAGGATTGGTTATCACGTATTTCTCTCGTTAGAACGCTGGCGACCTT
GGTTAGTCGTCGAAGGTTGGCTGAACCTTAAGAAGCCGCCCGATCGTCAG
CCCTCTGGGATCGACCACAC
Run BLAST on NCBI

transcript from alignment at sc0000001:1052869..1052988

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000316 ID=TCONS_00000316|Name=TCONS_00000316|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at sc0000001:1052869..1052988 (Clytia hemisphaerica)
GTGTGGTCGATCCCAGAGGGCTGACGATCGGGCGGCTTCTTAAGGTTCAG
CCAACCTTCGACGACTAACCAAGGTCGCCAGCGTTCTAACGAGAGAAATA
CGTGATAACCAATCCTCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000190XLOC_000190Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000316-exon-sc0000001-1491911889:1052869..1052988TCONS_00000316-exon-sc0000001-1491911889:1052869..1052988Clytia hemisphaericaexon
TCONS_00000316-exon-sc0000001-1510915933:1052869..1052988TCONS_00000316-exon-sc0000001-1510915933:1052869..1052988Clytia hemisphaericaexon
TCONS_00000316-exon-sc0000001-1575043694:1052869..1052988TCONS_00000316-exon-sc0000001-1575043694:1052869..1052988Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1052869..1052988 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000316 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top