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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000313 ID=TCONS_00000313|Name=TCONS_00000313|organism=Clytia hemisphaerica|type=transcript|length=982bp
CATCTAGACTAGAGGATATGTTTTTAGATGAAACACTAGCCTGTATTTTC
TTTCTATACAACTTGTGCATAACTTGCGTAGCGAACGGTAATGGTTTTTG
AACTGGCATACAGTCTAGTGCAGAATGGCACTTGATCGTGAAACAGTTTT
TATTTAGCATAAACGCGACGTCGCATTCCGGGTGCTGGCAACATTTTTCA
CTACACGCGGCAGCATCTTGAACagctccctggtcagtaaaatagcCTGA
GTCCCTTCCTCGGCGAAGCGAAACATTGTAAGAAACCGGGCTAAACTGAC
ACAGAGAGTGCTCAGTAGATACCAAATGTACTTTGTGTATATTTGGGATT
TCATGCTGCCCGCTCATGAAATTCTTAAACTCCTCCTCGATTCCTATTGG
TTGTTTAATGGAATCATCatctctgattggctgagatTTGATCACGTGAT
TGGTTATTCCATTGTTGTCTGTCACAATATCAATGGTCATTACGCCTCTG
GGTTCTTCCTTTTTAGCAATATTCGACAAATCGTTGATCTCCTTAAGAAA
CACTTGTTGATCTTTAGGTATGGGTGACCAAGGATAGTATTCCGTTTTCT
TTGTCGGATTATAATTCGGGTAAACAGACATTTTACCCGCGTGTCTTAAA
ATTAAGCTTTGCTCTTTTATGTAGGATCCTTTGAAAGTTAAGATGGTTGG
AATGTGACTTGTCTTGGTTTTACGGATTTTGCAGCTCTCCAAATTAGCAC
AATGGACTGAATAGCAATTATCAGCCACCATAAATGCCGCGTGGCATGAT
TTGATACTGCAGCACCTGTCCACACACTTTTCAAATGAATCTATTTTCCC
TTGGTCTGTAAAATTACCTGATTGAATACCTGCTTTTAGAGTGTATCCTT
TGATAACTTGACCGTGTGCGCATAAATTGATTGGTGTGATATCGCTAATG
AGAGATAATGAGTCTCGATCGCTTTCAGGGGT Run BLAST on NCBI protein sequence of TCONS_00000313-protein >TCONS_00000313-protein ID=TCONS_00000313-protein|Name=TCONS_00000313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
TPESDRDSLSLISDITPINLCAHGQVIKGYTLKAGIQSGNFTDQGKIDSF
EKCVDRCCSIKSCHAAFMVADNCYSVHCANLESCKIRKTKTSHIPTILTF
KGSYIKEQSLILRHAGKMSVYPNYNPTKKTEYYPWSPIPKDQQVFLKEIN
DLSNIAKKEEPRGVMTIDIVTDNNGITNHVIKSQPIRDDDSIKQPIGIEE
EFKNFMSGQHEIPNIHKVHLVSTEHSLCQFSPVSYNVSLRRGRDSGYFTD
QGAVQDAAACSEKCCQHPECDVAFMLNKNCFTIKCHSALDCMPVQKPLPF
ATQVMHKLYRKKIQASVSSKNISSSLD Run BLAST on NCBI transcript from alignment at sc0000001:1041591..1042572 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000313 ID=TCONS_00000313|Name=TCONS_00000313|organism=Clytia hemisphaerica|type=transcript|length=982bp|location=Sequence derived from alignment at sc0000001:1041591..1042572 (Clytia hemisphaerica)
ACCCCTGAAAGCGATCGAGACTCATTATCTCTCATTAGCGATATCACACC
AATCAATTTATGCGCACACGGTCAAGTTATCAAAGGATACACTCTAAAAG
CAGGTATTCAATCAGGTAATTTTACAGACCAAGGGAAAATAGATTCATTT
GAAAAGTGTGTGGACAGGTGCTGCAGTATCAAATCATGCCACGCGGCATT
TATGGTGGCTGATAATTGCTATTCAGTCCATTGTGCTAATTTGGAGAGCT
GCAAAATCCGTAAAACCAAGACAAGTCACATTCCAACCATCTTAACTTTC
AAAGGATCCTACATAAAAGAGCAAAGCTTAATTTTAAGACACGCGGGTAA
AATGTCTGTTTACCCGAATTATAATCCGACAAAGAAAACGGAATACTATC
CTTGGTCACCCATACCTAAAGATCAACAAGTGTTTCTTAAGGAGATCAAC
GATTTGTCGAATATTGCTAAAAAGGAAGAACCCAGAGGCGTAATGACCAT
TGATATTGTGACAGACAACAATGGAATAACCAATCACGTGATCAAatctc
agccaatcagagatGATGATTCCATTAAACAACCAATAGGAATCGAGGAG
GAGTTTAAGAATTTCATGAGCGGGCAGCATGAAATCCCAAATATACACAA
AGTACATTTGGTATCTACTGAGCACTCTCTGTGTCAGTTTAGCCCGGTTT
CTTACAATGTTTCGCTTCGCCGAGGAAGGGACTCAGgctattttactgac
cagggagctGTTCAAGATGCTGCCGCGTGTAGTGAAAAATGTTGCCAGCA
CCCGGAATGCGACGTCGCGTTTATGCTAAATAAAAACTGTTTCACGATCA
AGTGCCATTCTGCACTAGACTGTATGCCAGTTCAAAAACCATTACCGTTC
GCTACGCAAGTTATGCACAAGTTGTATAGAAAGAAAATACAGGCTAGTGT
TTCATCTAAAAACATATCCTCTAGTCTAGATG Coding sequence (CDS) from alignment at sc0000001:1041591..1042572 >TCONS_00000313 ID=TCONS_00000313|Name=TCONS_00000313|organism=Clytia hemisphaerica|type=CDS|length=981bp|location=Sequence derived from alignment at sc0000001:1041591..1042572 (Clytia hemisphaerica)
ACCCCTGAAAGCGATCGAGACTCATTATCTCTCATTAGCGATATCACACC
AATCAATTTATGCGCACACGGTCAAGTTATCAAAGGATACACTCTAAAAG
CAGGTATTCAATCAGGTAATTTTACAGACCAAGGGAAAATAGATTCATTT
GAAAAGTGTGTGGACAGGTGCTGCAGTATCAAATCATGCCACGCGGCATT
TATGGTGGCTGATAATTGCTATTCAGTCCATTGTGCTAATTTGGAGAGCT
GCAAAATCCGTAAAACCAAGACAAGTCACATTCCAACCATCTTAACTTTC
AAAGGATCCTACATAAAAGAGCAAAGCTTAATTTTAAGACACGCGGGTAA
AATGTCTGTTTACCCGAATTATAATCCGACAAAGAAAACGGAATACTATC
CTTGGTCACCCATACCTAAAGATCAACAAGTGTTTCTTAAGGAGATCAAC
GATTTGTCGAATATTGCTAAAAAGGAAGAACCCAGAGGCGTAATGACCAT
TGATATTGTGACAGACAACAATGGAATAACCAATCACGTGATCAAatctc
agccaatcagagatGATGATTCCATTAAACAACCAATAGGAATCGAGGAG
GAGTTTAAGAATTTCATGAGCGGGCAGCATGAAATCCCAAATATACACAA
AGTACATTTGGTATCTACTGAGCACTCTCTGTGTCAGTTTAGCCCGGTTT
CTTACAATGTTTCGCTTCGCCGAGGAAGGGACTCAGgctattttactgac
cagggagctGTTCAAGATGCTGCCGCGTGTAGTGAAAAATGTTGCCAGCA
CCCGGAATGCGACGTCGCGTTTATGCTAAATAAAAACTGTTTCACGATCA
AGTGCCATTCTGCACTAGACTGTATGCCAGTTCAAAAACCATTACCGTTC
GCTACGCAAGTTATGCACAAGTTGTATAGAAAGAAAATACAGGCTAGTGT
TTCATCTAAAAACATATCCTCTAGTCTAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000313-exon-sc0000001-1491911889:1041591..1042572 | TCONS_00000313-exon-sc0000001-1491911889:1041591..1042572 | Clytia hemisphaerica | exon |
| TCONS_00000313-exon-sc0000001-1510915933:1041591..1042572 | TCONS_00000313-exon-sc0000001-1510915933:1041591..1042572 | Clytia hemisphaerica | exon |
| TCONS_00000313-exon-sc0000001-1575043694:1041591..1042572 | TCONS_00000313-exon-sc0000001-1575043694:1041591..1042572 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1041591..1042572 . |
Blast
The following BLAST results are available for this feature:
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