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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000305 ID=TCONS_00000305|Name=TCONS_00000305|organism=Clytia hemisphaerica|type=transcript|length=1150bp
ctaattttcaaaactaaatttgaagtatttttcgaaacttttggtTTTTC
ATGACAACCTTTTTCAGTTcctttatttttaaattatattcaaaatttct
attttttaaatttccaatttttttaagatttatcagagttttatttttta
actgctttagaaatgttttattttgtgTTCTCGAAATGCGCCTTTATGTA
ACAACGCCCATGGGACCTCTACCCATTCAAATGCCATTTATACCACTGTC
TCAGTGACTAGTTGACACTCTTTTAacaatgaagattgaaaatgggcttt
tccagaaaaaaaattggaagatataattttttttggaaatttacccacgg
acattgtgacttttgacacaCACAGACCGCACAGACAGAAGGTctaaccc
cctggacaagcatcaggaTATTCAAAATTACCATCAAACAGAGGAGCAAA
ATCAATCCCAAACAGAGAAAGTTTACCCCTGGGCAAGGCAAAtcttgtag
atttttcactaggTATCTCCGGACATACCCCCCTGTACGAACATTTTATG
GAAGAGCACATTCTCTTCTTTCTAAATAACGTTTGTTTCAAATCCCATTT
TTTAAACGCTCAAGAACTTATTCAAGATTCAAAACTTTCCTTTCTAGTGT
AGGGATTGGATTTCAGTATAGGTTTTCCAATGGGTTTGGAATTATAGGAA
TTTTCTAACTGGAGAAGATTTCTCAGCTAATTTTTCTATGGGTATTGGGT
TCtaacgggtctgtgacacgggggtgtTTTATTTGTGGAAGTTTGGTTTT
GAATTacaatgaattatttttctatagaatttcattttcctaaaaattat
ATTATGTCATAAAGCCTTTTTTCAACGGCGGGCGGGCGTGCGAAAAAAAA
CCGAAATTAACCCGAAAATCAATACTATGcgtgttgcatttttcaaatct
ttaacttttttgcaattttcgaaCGATTCGAACGTTCTACGGACAAACTC
ACTAAGATGACTTTACATTTACGAATCTGTTTTTAACTATGGTAAGTCCA
ACCAAGTATAGGAAATCGTACTTTATTGAATATACATTTATGACACGCTA
TTTTTTAAAGTGTacagtttttttatatttgaaagaattttttcgGACGG Run BLAST on NCBI transcript from alignment at sc0000001:974705..975854 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000305 ID=TCONS_00000305|Name=TCONS_00000305|organism=Clytia hemisphaerica|type=transcript|length=1150bp|location=Sequence derived from alignment at sc0000001:974705..975854 (Clytia hemisphaerica)
CCGTCcgaaaaaattctttcaaatataaaaaaactgtACACTTTAAAAAA
TAGCGTGTCATAAATGTATATTCAATAAAGTACGATTTCCTATACTTGGT
TGGACTTACCATAGTTAAAAACAGATTCGTAAATGTAAAGTCATCTTAGT
GAGTTTGTCCGTAGAACGTTCGAATCGttcgaaaattgcaaaaaagttaa
agatttgaaaaatgcaacacgCATAGTATTGATTTTCGGGTTAATTTCGG
TTTTTTTTCGCACGCCCGCCCGCCGTTGAAAAAAGGCTTTATGACATAAT
ataatttttaggaaaatgaaattctatagaaaaataattcattgtAATTC
AAAACCAAACTTCCACAAATAAAacacccccgtgtcacagacccgttaGA
ACCCAATACCCATAGAAAAATTAGCTGAGAAATCTTCTCCAGTTAGAAAA
TTCCTATAATTCCAAACCCATTGGAAAACCTATACTGAAATCCAATCCCT
ACACTAGAAAGGAAAGTTTTGAATCTTGAATAAGTTCTTGAGCGTTTAAA
AAATGGGATTTGAAACAAACGTTATTTAGAAAGAAGAGAATGTGCTCTTC
CATAAAATGTTCGTACAGGGGGGTATGTCCGGAGATAcctagtgaaaaat
ctacaagaTTTGCCTTGCCCAGGGGTAAACTTTCTCTGTTTGGGATTGAT
TTTGCTCCTCTGTTTGATGGTAATTTTGAATAtcctgatgcttgtccagg
gggttagACCTTCTGTCTGTGCGGTCTGTGtgtgtcaaaagtcacaatgt
ccgtgggtaaatttccaaaaaaaattatatcttccaattttttttctgga
aaagcccattttcaatcttcattgtTAAAAGAGTGTCAACTAGTCACTGA
GACAGTGGTATAAATGGCATTTGAATGGGTAGAGGTCCCATGGGCGTTGT
TACATAAAGGCGCATTTCGAGAAcacaaaataaaacatttctaaagcagt
taaaaaataaaactctgataaatcttaaaaaaattggaaatttaaaaaat
agaaattttgaatataatttaaaaataaaggAACTGAAAAAGGTTGTCAT
GAAAAaccaaaagtttcgaaaaatacttcaaatttagttttgaaaattag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000305-exon-sc0000001-1491911889:974705..975854 | TCONS_00000305-exon-sc0000001-1491911889:974705..975854 | Clytia hemisphaerica | exon |
| TCONS_00000305-exon-sc0000001-1510915933:974705..975854 | TCONS_00000305-exon-sc0000001-1510915933:974705..975854 | Clytia hemisphaerica | exon |
| TCONS_00000305-exon-sc0000001-1575043694:974705..975854 | TCONS_00000305-exon-sc0000001-1575043694:974705..975854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:974705..975854 . |
Blast
The following BLAST results are available for this feature:
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