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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000304 ID=TCONS_00000304|Name=TCONS_00000304|organism=Clytia hemisphaerica|type=transcript|length=732bp
CAAAGTTCCGAGCATGCGTAGTTTCACCAATATTCTTGTTTGTAACGCTG
CTTTTGCTGATTTGCTAATCACTTTAGTGCCCAATGTTCACGAGGTGATT
GATATCGTGTATTATCAAGGAGACTGGGTCCTAGGTGGTTTCATGTGTTC
GTTTTTGTACATGTGTATCTATTTATCGGTAGCAGCGACTGTTTTAACAC
TCGTTTTTATCNTATACATGTGTATCTATTTATCGGTAGCAGCGACTGTT
TTAACACTCATTTTTATTACCATTGATCGTTATTTCTCGGTGACCATGCC
CTATAAGAAATTCATGAAATTGTCGGATTTACCGAAAGTTGTCGGCGTGA
TTTGGTCGGCCGCGTTTTGTTTCTCGTCACCGactgtttttatacaaaaa
gtaATCCCCTTTGATGGACGAATGATTTGTATTGAAAGATGGGATTCACC
TTTTGATGTCAAGGAATCACCTAAACATTATACTATCATTCTATTTATGT
TTTTGTACGCACTACCCTTAACTTTAATGGGGTTGATGTATTGGGCCATC
GCTCGTAAATTATCGAAACAATATCGGGCGTTAACCAAACGACTTAACGA
ACAAGGTGTGGAAACTACTTCTGTTAGGGAATCAACTCCCAGACGTGACG
GGTATTCCCCGGTAACAAGTGAAAATAGAAATAAGGTACTGGCTGATAAT
TTAAACAGGAGCATTAGGGAAGACGAATTAAA Run BLAST on NCBI protein sequence of TCONS_00000304-protein >TCONS_00000304-protein ID=TCONS_00000304-protein|Name=TCONS_00000304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
KVPSMRSFTNILVCNAAFADLLITLVPNVHEVIDIVYYQGDWVLGGFMCS
FLYMCIYLSVAATVLTLVFIXYMCIYLSVAATVLTLIFITIDRYFSVTMP
YKKFMKLSDLPKVVGVIWSAAFCFSSPTVFIQKVIPFDGRMICIERWDSP
FDVKESPKHYTIILFMFLYALPLTLMGLMYWAIARKLSKQYRALTKRLNE
QGVETTSVRESTPRRDGYSPVTSENRNKVLADNLNRSIREDEL Run BLAST on NCBI transcript from alignment at sc0000001:964050..964781 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000304 ID=TCONS_00000304|Name=TCONS_00000304|organism=Clytia hemisphaerica|type=transcript|length=732bp|location=Sequence derived from alignment at sc0000001:964050..964781 (Clytia hemisphaerica)
TTTAATTCGTCTTCCCTAATGCTCCTGTTTAAATTATCAGCCAGTACCTT
ATTTCTATTTTCACTTGTTACCGGGGAATACCCGTCACGTCTGGGAGTTG
ATTCCCTAACAGAAGTAGTTTCCACACCTTGTTCGTTAAGTCGTTTGGTT
AACGCCCGATATTGTTTCGATAATTTACGAGCGATGGCCCAATACATCAA
CCCCATTAAAGTTAAGGGTAGTGCGTACAAAAACATAAATAGAATGATAG
TATAATGTTTAGGTGATTCCTTGACATCAAAAGGTGAATCCCATCTTTCA
ATACAAATCATTCGTCCATCAAAGGGGATtactttttgtataaaaacagt
CGGTGACGAGAAACAAAACGCGGCCGACCAAATCACGCCGACAACTTTCG
GTAAATCCGACAATTTCATGAATTTCTTATAGGGCATGGTCACCGAGAAA
TAACGATCAATGGTAATAAAAATGAGTGTTAAAACAGTCGCTGCTACCGA
TAAATAGATACACATGTATANGATAAAAACGAGTGTTAAAACAGTCGCTG
CTACCGATAAATAGATACACATGTACAAAAACGAACACATGAAACCACCT
AGGACCCAGTCTCCTTGATAATACACGATATCAATCACCTCGTGAACATT
GGGCACTAAAGTGATTAGCAAATCAGCAAAAGCAGCGTTACAAACAAGAA
TATTGGTGAAACTACGCATGCTCGGAACTTTG Coding sequence (CDS) from alignment at sc0000001:964050..964781 >TCONS_00000304 ID=TCONS_00000304|Name=TCONS_00000304|organism=Clytia hemisphaerica|type=CDS|length=729bp|location=Sequence derived from alignment at sc0000001:964050..964781 (Clytia hemisphaerica)
TAATTCGTCTTCCCTAATGCTCCTGTTTAAATTATCAGCCAGTACCTTAT
TTCTATTTTCACTTGTTACCGGGGAATACCCGTCACGTCTGGGAGTTGAT
TCCCTAACAGAAGTAGTTTCCACACCTTGTTCGTTAAGTCGTTTGGTTAA
CGCCCGATATTGTTTCGATAATTTACGAGCGATGGCCCAATACATCAACC
CCATTAAAGTTAAGGGTAGTGCGTACAAAAACATAAATAGAATGATAGTA
TAATGTTTAGGTGATTCCTTGACATCAAAAGGTGAATCCCATCTTTCAAT
ACAAATCATTCGTCCATCAAAGGGGATtactttttgtataaaaacagtCG
GTGACGAGAAACAAAACGCGGCCGACCAAATCACGCCGACAACTTTCGGT
AAATCCGACAATTTCATGAATTTCTTATAGGGCATGGTCACCGAGAAATA
ACGATCAATGGTAATAAAAATGAGTGTTAAAACAGTCGCTGCTACCGATA
AATAGATACACATGTATANGATAAAAACGAGTGTTAAAACAGTCGCTGCT
ACCGATAAATAGATACACATGTACAAAAACGAACACATGAAACCACCTAG
GACCCAGTCTCCTTGATAATACACGATATCAATCACCTCGTGAACATTGG
GCACTAAAGTGATTAGCAAATCAGCAAAAGCAGCGTTACAAACAAGAATA
TTGGTGAAACTACGCATGCTCGGAACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000304-exon-sc0000001-1491911889:964050..964781 | TCONS_00000304-exon-sc0000001-1491911889:964050..964781 | Clytia hemisphaerica | exon |
| TCONS_00000304-exon-sc0000001-1510915933:964050..964781 | TCONS_00000304-exon-sc0000001-1510915933:964050..964781 | Clytia hemisphaerica | exon |
| TCONS_00000304-exon-sc0000001-1575043694:964050..964781 | TCONS_00000304-exon-sc0000001-1575043694:964050..964781 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:964050..964781 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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