TCONS_00000289 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000289
Unique NameTCONS_00000289
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000289 ID=TCONS_00000289|Name=TCONS_00000289|organism=Clytia hemisphaerica|type=transcript|length=151bp
AAATATtcgattttttgtttcataataTTGTATATTTTAGGAATAATTTA
ATATAACTTAATGTAATATAAAAAGGTTTGATAACATATAATTGCAAGTA
TGAGATATTCATAATATATTTTTGTGTAGTGTAAAGATATATATCAGTAT
C
Run BLAST on NCBI

transcript from alignment at sc0000001:597721..597871

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000289 ID=TCONS_00000289|Name=TCONS_00000289|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0000001:597721..597871 (Clytia hemisphaerica)
GATACTGATATATATCTTTACACTACACAAAAATATATTATGAATATCTC
ATACTTGCAATTATATGTTATCAAACCTTTTTATATTACATTAAGTTATA
TTAAATTATTCCTAAAATATACAAtattatgaaacaaaaaatcgaATATT
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000164XLOC_000164Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000289-exon-sc0000001-1491911889:597721..597871TCONS_00000289-exon-sc0000001-1491911889:597721..597871Clytia hemisphaericaexon
TCONS_00000289-exon-sc0000001-1510915933:597721..597871TCONS_00000289-exon-sc0000001-1510915933:597721..597871Clytia hemisphaericaexon
TCONS_00000289-exon-sc0000001-1575043694:597721..597871TCONS_00000289-exon-sc0000001-1575043694:597721..597871Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:597721..597871 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000289 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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