|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000284 ID=TCONS_00000284|Name=TCONS_00000284|organism=Clytia hemisphaerica|type=transcript|length=1738bp
ttaaagggacattacagtagtaaaatgtaaacattgcgtgaaccacgtgt
cattaaaaagaacaattaaaatcacgtgtccaaaacaaacttgtaaaaca
attgaacaattaaaattagccatatttggtttgattttttattttgacat
gtgacatttgttttgattttgtatccgctgcatacagtttgtttacaaat
ttcgcaagtactgttatgtccctttaagtaaatcggtaaaatcacgaaga
cgaacgaaaatttaacaggctagtgagtttcaaccaatcaaatttcgtat
ttccactagcctattacatttttcgtccgtcgtcgtgattatcttggtat
gcttaacctcagtaataTCTACAAATATAGCGCAAGAAACTTCAACATTC
ATTTGAAACTCTCAATTTCCTGTtgtccactgacctttatattcTCTGGA
CACTCAATCTGTTTCTCGATATCCTGGCCAAGCAGAATCTTTGATAGCag
atttttgaaagtggtaccctaattgTAGCATTTCTCAGTGTTGGTGAGCA
AAGCTTTAAAAGGATTATTTCATTGAATTACAAATTGAGCTACATTGAAT
AGTTCTACTATTAGGGTGTACCACTCTTCTAAAAACTCGAATCGAAAATG
GGTGATATTTTTTGGTATATAAAGATCAGTGCTATACattcaactctctc
taattcgaaccgcAATCACAGAACTTATTGGAGATTATATATTAAGCTAT
CTTTTATGGTTGCATTTCAGCCTTAAAATTTCTGTGTCGCGATGTTAAta
tgctaattttttttttttttaatgtcaaaaGCTAACCCGGATTTTGAAGA
AGTTTGGGTAGTTAGTTGTGTTCTAGGACTTTATCCacaatttttattgt
tcatttAATTGTCAATTTACTtcgaaaaatgttttaccaGATTGATTTCC
TCATCATTCAAAATGGTGTCAATTCTTTGGTTTTAccttcaaaaagttta
aaaaattgtcCAATTAAAACATACTTcaagacacccctgtgtcacagacc
cgctgggaccctagccccactggaaaatttggctgggaaattgactttga
tttcatccccactcacAAATGATtgtctaaaaattgcactccaaaactat
ccccactggattttttaaccttggaaagaaacttttattttatccccatt
gaaatttcaatagGGATTTTTATCCATACAgtactgaagaaaaaagttcc
accggggctgtgagacaggggtgtttaaaggGCGTTGTCGTTGCATACTC
GAATATAAAGGTGAACCGAAATCACCAAACCTCCTTTATTTTACCAgcaa
ccaatcaaattccagTATCATTTCCCTTTGCCATCTGCATTATTATTACC
ATCATTGATAGCTAATTTACTCATAAGTTCAGCCTCAAGTtcagttttct
tttcacttgttaTATCTACTGTTGCATTGTTATCAGTAATTAATGCATTG
CGACGTCCTTTTCTTTCTGAgcatgaaaattctttttccaatTGTTCTTT
ATTAATTTCAGCAACTGCTGTCGCCATCTTCTTTTTTGTATTCCTTTGTC
TTTTCTCTTGAAAATTCAGTAATCGTATATTTTTATCGTTAGCGCATGCG
TAATACAATATTCATGTGCGTCGATAGGTACATAAAAGTCCAACTTTAGG
TTatctattttgtatttttttagcaCAAAAGATTTCTG Run BLAST on NCBI transcript from alignment at sc0000001:309863..311600 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000284 ID=TCONS_00000284|Name=TCONS_00000284|organism=Clytia hemisphaerica|type=transcript|length=1738bp|location=Sequence derived from alignment at sc0000001:309863..311600 (Clytia hemisphaerica)
CAGAAATCTTTTGtgctaaaaaaatacaaaatagatAACCTAAAGTTGGA
CTTTTATGTACCTATCGACGCACATGAATATTGTATTACGCATGCGCTAA
CGATAAAAATATACGATTACTGAATTTTCAAGAGAAAAGACAAAGGAATA
CAAAAAAGAAGATGGCGACAGCAGTTGCTGAAATTAATAAAGAACAattg
gaaaaagaattttcatgcTCAGAAAGAAAAGGACGTCGCAATGCATTAAT
TACTGATAACAATGCAACAGTAGATAtaacaagtgaaaagaaaactgaAC
TTGAGGCTGAACTTATGAGTAAATTAGCTATCAATGATGGTAATAATAAT
GCAGATGGCAAAGGGAAATGATActggaatttgattggttgcTGGTAAAA
TAAAGGAGGTTTGGTGATTTCGGTTCACCTTTATATTCGAGTATGCAACG
ACAACGCcctttaaacacccctgtctcacagccccggtggaacttttttc
ttcagtacTGTATGGATAAAAATCCctattgaaatttcaatggggataaa
ataaaagtttctttccaaggttaaaaaatccagtggggatagttttggag
tgcaatttttagacaATCATTTgtgagtggggatgaaatcaaagtcaatt
tcccagccaaattttccagtggggctagggtcccagcgggtctgtgacac
aggggtgtcttgAAGTATGTTTTAATTGgacaattttttaaactttttga
aggTAAAACCAAAGAATTGACACCATTTTGAATGATGAGGAAATCAATCt
ggtaaaacatttttcgaAGTAAATTGACAATTaaatgaacaataaaaatt
gtGGATAAAGTCCTAGAACACAACTAACTACCCAAACTTCTTCAAAATCC
GGGTTAGCttttgacattaaaaaaaaaaaaaattagcataTTAACATCGC
GACACAGAAATTTTAAGGCTGAAATGCAACCATAAAAGATAGCTTAATAT
ATAATCTCCAATAAGTTCTGTGATTgcggttcgaattagagagagttgaa
tGTATAGCACTGATCTTTATATACCAAAAAATATCACCCATTTTCGATTC
GAGTTTTTAGAAGAGTGGTACACCCTAATAGTAGAACTATTCAATGTAGC
TCAATTTGTAATTCAATGAAATAATCCTTTTAAAGCTTTGCTCACCAACA
CTGAGAAATGCTAcaattagggtaccactttcaaaaatctGCTATCAAAG
ATTCTGCTTGGCCAGGATATCGAGAAACAGATTGAGTGTCCAGAgaatat
aaaggtcagtggacaACAGGAAATTGAGAGTTTCAAATGAATGTTGAAGT
TTCTTGCGCTATATTTGTAGAtattactgaggttaagcataccaagataa
tcacgacgacggacgaaaaatgtaataggctagtggaaatacgaaatttg
attggttgaaactcactagcctgttaaattttcgttcgtcttcgtgattt
taccgatttacttaaagggacataacagtacttgcgaaatttgtaaacaa
actgtatgcagcggatacaaaatcaaaacaaatgtcacatgtcaaaataa
aaaatcaaaccaaatatggctaattttaattgttcaattgttttacaagt
ttgttttggacacgtgattttaattgttctttttaatgacacgtggttca
cgcaatgtttacattttactactgtaatgtccctttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000284-exon-sc0000001-1491911889:309863..311600 | TCONS_00000284-exon-sc0000001-1491911889:309863..311600 | Clytia hemisphaerica | exon |
| TCONS_00000284-exon-sc0000001-1510915933:309863..311600 | TCONS_00000284-exon-sc0000001-1510915933:309863..311600 | Clytia hemisphaerica | exon |
| TCONS_00000284-exon-sc0000001-1575043694:309863..311600 | TCONS_00000284-exon-sc0000001-1575043694:309863..311600 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:309863..311600 . |
Blast
The following BLAST results are available for this feature:
|
