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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000275 ID=TCONS_00000275|Name=TCONS_00000275|organism=Clytia hemisphaerica|type=transcript|length=1241bp
attcatATTAAGATTTGCTCGAGTATTAAGCGAGAAATCAATAACTAGCA
GCTGCCGCTACAGTAcaacttttttacaagaaaaacaaGACAAATCAAAA
TGTGAATATTAAATGGTTGGTGACtggaaataaaatttccaaaaaatcaa
tgGTGTTGAATCATGCTGGCCGATGGTTATGATCTCCATGCAAGTTTTTA
CTACCATTGTTTACATTGACGTTATTCAACATTGGTCATTGTGCGCCATC
CATGCCCCATGACGGCATGAAACACCATGAAACTTATTGGACTTTTATAC
GATACAGTCTGTACAGTCTGATTATCATATCAGCTTTTTATCACAGATGT
ATATATGTATTGTATGTAAATACTTATTGATATACAGTTAAACAAAATTG
ATGTatggcaaaaacaaaacagagcaAACGTTGGATTGGTCAGGTGACGC
TATAAAAGTCAAGCttttgaaagtttcaagtcaTATCATATCCAATCAAA
CAGAATGGACAATCAAATTGAATTGTAAATTTCCTGACGAAACTCTATAA
ATTTGATTGCACTTTTGGTGTATCATTGAAGGTTTAAAGGTTCAGGTGTA
AATGGAATGCTTAAACGACCAAAGATGTTTGAGATATGTGACCTCCCGGA
TGTAGTGACTCGTTCGATTTCCGATAACTTTACAGATTTTACTGACGACA
GTCATTGTTTACCAATACCTAGATTGGTTTAAGCcacaatcacaaataac
ttgtgtttgtCGTCCGACCGACTGATAATTTCTGgaaaaattcctttcaa
aatataACGGAGATATTGAGGTTCCTATCCGTTGGTGCATGGATGTAGGT
CTTCTCCACCGTATattttttcttgagaagttgttcttcaaattagtttt
caaggttggctcagctcaaattttttcatctatagctcaaaattttggta
atttctcataaaaatattaatttcattaaaaagcgtcAGTATATTTTCTA
TGAATCCTATTAGAAGTTTTGCGACGCATTTTCTTGCTTCAAGTAACCGA
TATAGTGCAAAAtggcagcattaatctttgatacgcatttcggTAGGATG
CTAATGTGACTAACTGTTTGTGGGAAATCTTTTGACTACCTTTCTTAATA
TACTATTAATTGAAATCTTAAACAAAATTAGAATGCCATACTTTTTTTGT
GAATTCTGTCCAAATTGTCAACATTGAAATTTCTCGGTAGA Run BLAST on NCBI transcript from alignment at sc0000001:42857..44097 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000275 ID=TCONS_00000275|Name=TCONS_00000275|organism=Clytia hemisphaerica|type=transcript|length=1241bp|location=Sequence derived from alignment at sc0000001:42857..44097 (Clytia hemisphaerica)
TCTACCGAGAAATTTCAATGTTGACAATTTGGACAGAATTCACAAAAAAA
GTATGGCATTCTAATTTTGTTTAAGATTTCAATTAATAGTATATTAAGAA
AGGTAGTCAAAAGATTTCCCACAAACAGTTAGTCACATTAGCATCCTAcc
gaaatgcgtatcaaagattaatgctgccaTTTTGCACTATATCGGTTACT
TGAAGCAAGAAAATGCGTCGCAAAACTTCTAATAGGATTCATAGAAAATA
TACTgacgctttttaatgaaattaatatttttatgagaaattaccaaaat
tttgagctatagatgaaaaaatttgagctgagccaaccttgaaaactaat
ttgaagaacaacttctcaagaaaaaatATACGGTGGAGAAGACCTACATC
CATGCACCAACGGATAGGAACCTCAATATCTCCGTtatattttgaaagga
atttttcCAGAAATTATCAGTCGGTCGGACGacaaacacaagttatttgt
gattgtgGCTTAAACCAATCTAGGTATTGGTAAACAATGACTGTCGTCAG
TAAAATCTGTAAAGTTATCGGAAATCGAACGAGTCACTACATCCGGGAGG
TCACATATCTCAAACATCTTTGGTCGTTTAAGCATTCCATTTACACCTGA
ACCTTTAAACCTTCAATGATACACCAAAAGTGCAATCAAATTTATAGAGT
TTCGTCAGGAAATTTACAATTCAATTTGATTGTCCATTCTGTTTGATTGG
ATATGATAtgacttgaaactttcaaaaGCTTGACTTTTATAGCGTCACCT
GACCAATCCAACGTTtgctctgttttgtttttgccatACATCAATTTTGT
TTAACTGTATATCAATAAGTATTTACATACAATACATATATACATCTGTG
ATAAAAAGCTGATATGATAATCAGACTGTACAGACTGTATCGTATAAAAG
TCCAATAAGTTTCATGGTGTTTCATGCCGTCATGGGGCATGGATGGCGCA
CAATGACCAATGTTGAATAACGTCAATGTAAACAATGGTAGTAAAAACTT
GCATGGAGATCATAACCATCGGCCAGCATGATTCAACACcattgattttt
tggaaattttatttccaGTCACCAACCATTTAATATTCACATTTTGATTT
GTCttgtttttcttgtaaaaaagttgTACTGTAGCGGCAGCTGCTAGTTA
TTGATTTCTCGCTTAATACTCGAGCAAATCTTAATatgaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000275-exon-sc0000001-1491911889:42857..44097 | TCONS_00000275-exon-sc0000001-1491911889:42857..44097 | Clytia hemisphaerica | exon |
| TCONS_00000275-exon-sc0000001-1510915933:42857..44097 | TCONS_00000275-exon-sc0000001-1510915933:42857..44097 | Clytia hemisphaerica | exon |
| TCONS_00000275-exon-sc0000001-1575043694:42857..44097 | TCONS_00000275-exon-sc0000001-1575043694:42857..44097 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:42857..44097 . |
Blast
The following BLAST results are available for this feature:
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