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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000264 ID=TCONS_00000264|Name=TCONS_00000264|organism=Clytia hemisphaerica|type=transcript|length=2370bp
GTGAACCACAAAACCAGCATTGCaacatttaaaacgaaacttcCTTTATG
GGAGAATCAGGAGAATGGGACCTTCCTGCCCTTCCTGCCTCCTCTCCCGC
CCAGACTATCATATCTGTTATATACGTCACAAGGCGTCTTTTTGTCTGAA
CAAAAGGCAGCAAAACTCCGAGCAGAACATCATATTTTCCAACATGGCGG
ACGACGAAGTTGCATCAAACAGCGAAGTGTTCGACGATGTCGATTCAGAT
CCTGGATCAATCATAAACAATGTAGTTGAATCATGCAGTAAAATTTTAAT
CCCTTCCATGGCTCAACCTTCCATGAACAGGCCACACAATGAAGAAGAAG
TAAATACGACTGACGCCATTTTTCATACGGATCACGATGATGAAGGGATC
AACACTAAAAGTGACGAAGAATCGTCGCTGGAAGATCAAAACACCGACGA
TGTGGTAAACAACATTAAGCGTGGAAGTCCTCTTCTCGAAGATAAACAAA
GGATCAGTGGTCACAGTCCAAGAGTTGTAAGATGGACACTAGATACTATG
GCAGCTGCAATGGATGCAGTTTTTGCAGGGGAGATGACCACAACAAATGC
ATCAAGAAAATTTGGAATCCCCAGAACCACCCTCCTTGATAGGCTTTCAA
TGAAAGTTAAGAGGCAACATTTAGACTGTCCAGGTTCTTTCCCTCTTAAT
GCTGATAATGATGCAAAAGTTGTTGATTTTATTCTTGCTAATCAAAATCT
TGATAAACAAACTTTAATCAAGGGGCTTTTAAGCCTTGGAGAGGAATTAG
CTAGTATGCAGGGAAgacctttcaatgggccattAAACTCCAGGAAATGG
TTGAAATTGTTTGTTCAAAAGCATCcaaatttgaatgttttttcttacag
cCGATCTAGAGCACCAAGCTCACGCTCAGTTTCTTTTTCTGGCACTAGCT
CCCATGCTCGACTTCAATCGTCATCTATTTCTAATGATAATACAGTGCTT
ATTCCTCAGCAAATATTACACATCCAGCATGATCCTTTAGCACAATTGCA
ATCTGAACATGGCACAGAACAAGATTCTCCAACTCTTCCAGATNtttgaa
tgttttttcttacagcCGATCTAGAGCACCAAGCTCACGCTCAGTTTCTT
TTTCTGGCACTAGCTCCCATGCTCGACTTCAATCGTCATCTATTTCTAAT
GATAATACAGTGCTTATTCCTCAGCAAATATTACACATCCAGCATGATCC
TTTAGCACAATTGCAAACTGAACATGGCACAGAACAAGATTCCCCAACTC
TTCCAGAAAACGATAATGTGTTTGATTCTTTGGAGTCATCCTTAGCAAAG
CAAGGCGTTCGAGCTATAGAACAAAAACTGGGAGCTGAACAATTGTCATA
TTTCAATTATAGATACATGAACAAAAATTTAGAGAGGGGATATGAGTTAT
GGAAATTatgcaaaatcaaaacagatGCAGGTGATAACCTCTCAACTTTT
GCATTGAGTGGGGTAGAGGAAGGTTTAGTGGAAGAGCATTTGAAGTATTT
CAGATTTCGATATGACAATACAGAACTTGAGGAGGGCTATAAACTTTGGG
CTGTTCTGAGAGAGAAAATGCATGAATGAACTAAGATATCCTGTGTTCGT
TTTAATATTGAATTAACTAATTACTTTATATACTTCAGTATAATTTTTTT
GCATGTTGGTTGTAAAATACGCATTATCAGTGCCTCTTAGATGGCGTTAA
ACATCTTGAAAGTGttcttttcatcttttcaaATTTCCCTTGGGGATTTT
CAGGGATGACAACCAAATCCactaaatccgcgaaatttgaTTCCTTTGTC
TTTTGCAACACAAATGTTACCTACTGTAGGGACAATATAATTTATCCTGT
TTTTATTGACTGAGTAGTAATGTTTGATTAATCTGTTATTCAATAGATCA
TTGCGTTCTCCCAAACAAATACTGGCTCATAACTTgtttttgtacatatt
tttaatcaaatttccCTTACTTTGTTAGATTTACAGATTTAGTTTGTTGT
ATATACTATCTATATACCTTGCATCATAAAAATTATACTGTTTTCtaatg
tcaacattagaccaagttatggTATACTATTTTTCGCTAATTATTGAAGT
AGTGGAATTGGATTAGGAACCATTCAAAACGTACATAAGTTCAAATATAA
GCAAAATTTGATACTCCCTCTGTGTATGTACGCTTTTCTGAAAACCCCCT
CCTCTAAGAAAATGTTTTATAATTATAGCTGGATAACAAATATGGGTAAC
ACAAGTAAGCTGGGTTACGAATATCAAATAGAAGGTTACAAAAAAACTAG
AAATcaaaacagtttgaaaa Run BLAST on NCBI transcript from alignment at sc0000001:2528102..2530471- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000264 ID=TCONS_00000264|Name=TCONS_00000264|organism=Clytia hemisphaerica|type=transcript|length=2370bp|location=Sequence derived from alignment at sc0000001:2528102..2530471- (Clytia hemisphaerica)
GTGAACCACAAAACCAGCATTGCAACATTTAAAACGAAACTTCCTTTATG
GGAGAATCAGGAGAATGGGACCTTCCTGCCCTTCCTGCCTCCTCTCCCGC
CCAGACTATCATATCTGTTATATACGTCACAAGGCGTCTTTTTGTCTGAA
CAAAAGGCAGCAAAACTCCGAGCAGAACATCATATTTTCCAACATGGCGG
ACGACGAAGTTGCATCAAACAGCGAAGTGTTCGACGATGTCGATTCAGAT
CCTGGATCAATCATAAACAATGTAGTTGAATCATGCAGTAAAATTTTAAT
CCCTTCCATGGCTCAACCTTCCATGAACAGGCCACACAATGAAGAAGAAG
TAAATACGACTGACGCCATTTTTCATACGGATCACGATGATGAAGGGATC
AACACTAAAAGTGACGAAGAATCGTCGCTGGAAGATCAAAACACCGACGA
TGTGGTAAACAACATTAAGCGTGGAAGTCCTCTTCTCGAAGATAAACAAA
GGATCAGTGGTCACAGTCCAAGAGTTGTAAGATGGACACTAGATACTATG
GCAGCTGCAATGGATGCAGTTTTTGCAGGGGAGATGACCACAACAAATGC
ATCAAGAAAATTTGGAATCCCCAGAACCACCCTCCTTGATAGGCTTTCAA
TGAAAGTTAAGAGGCAACATTTAGACTGTCCAGGTTCTTTCCCTCTTAAT
GCTGATAATGATGCAAAAGTTGTTGATTTTATTCTTGCTAATCAAAATCT
TGATAAACAAACTTTAATCAAGGGGCTTTTAAGCCTTGGAGAGGAATTAG
CTAGTATGCAGGGAAGACCTTTCAATGGGCCATTAAACTCCAGGAAATGG
TTGAAATTGTTTGTTCAAAAGCATCCAAATTTGAATGTTTTTTCTTACAG
CCGATCTAGAGCACCAAGCTCACGCTCAGTTTCTTTTTCTGGCACTAGCT
CCCATGCTCGACTTCAATCGTCATCTATTTCTAATGATAATACAGTGCTT
ATTCCTCAGCAAATATTACACATCCAGCATGATCCTTTAGCACAATTGCA
ATCTGAACATGGCACAGAACAAGATTCTCCAACTCTTCCAGATNTTTGAA
TGTTTTTTCTTACAGCCGATCTAGAGCACCAAGCTCACGCTCAGTTTCTT
TTTCTGGCACTAGCTCCCATGCTCGACTTCAATCGTCATCTATTTCTAAT
GATAATACAGTGCTTATTCCTCAGCAAATATTACACATCCAGCATGATCC
TTTAGCACAATTGCAAACTGAACATGGCACAGAACAAGATTCCCCAACTC
TTCCAGAAAACGATAATGTGTTTGATTCTTTGGAGTCATCCTTAGCAAAG
CAAGGCGTTCGAGCTATAGAACAAAAACTGGGAGCTGAACAATTGTCATA
TTTCAATTATAGATACATGAACAAAAATTTAGAGAGGGGATATGAGTTAT
GGAAATTATGCAAAATCAAAACAGATGCAGGTGATAACCTCTCAACTTTT
GCATTGAGTGGGGTAGAGGAAGGTTTAGTGGAAGAGCATTTGAAGTATTT
CAGATTTCGATATGACAATACAGAACTTGAGGAGGGCTATAAACTTTGGG
CTGTTCTGAGAGAGAAAATGCATGAATGAACTAAGATATCCTGTGTTCGT
TTTAATATTGAATTAACTAATTACTTTATATACTTCAGTATAATTTTTTT
GCATGTTGGTTGTAAAATACGCATTATCAGTGCCTCTTAGATGGCGTTAA
ACATCTTGAAAGTGTTCTTTTCATCTTTTCAAATTTCCCTTGGGGATTTT
CAGGGATGACAACCAAATCCACTAAATCCGCGAAATTTGATTCCTTTGTC
TTTTGCAACACAAATGTTACCTACTGTAGGGACAATATAATTTATCCTGT
TTTTATTGACTGAGTAGTAATGTTTGATTAATCTGTTATTCAATAGATCA
TTGCGTTCTCCCAAACAAATACTGGCTCATAACTTGTTTTTGTACATATT
TTTAATCAAATTTCCCTTACTTTGTTAGATTTACAGATTTAGTTTGTTGT
ATATACTATCTATATACCTTGCATCATAAAAATTATACTGTTTTCTAATG
TCAACATTAGACCAAGTTATGGTATACTATTTTTCGCTAATTATTGAAGT
AGTGGAATTGGATTAGGAACCATTCAAAACGTACATAAGTTCAAATATAA
GCAAAATTTGATACTCCCTCTGTGTATGTACGCTTTTCTGAAAACCCCCT
CCTCTAAGAAAATGTTTTATAATTATAGCTGGATAACAAATATGGGTAAC
ACAAGTAAGCTGGGTTACGAATATCAAATAGAAGGTTACAAAAAAACTAG
AAATCAAAACAGTTTGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000264-exon-sc0000001-1575043694:2528102..2530471 | TCONS_00000264-exon-sc0000001-1575043694:2528102..2530471 | Clytia hemisphaerica | exon |
| TCONS_00000264-exon-sc0000001-1510915933:2528102..2530471 | TCONS_00000264-exon-sc0000001-1510915933:2528102..2530471 | Clytia hemisphaerica | exon |
| TCONS_00000264-exon-sc0000001-1491911889:2528102..2530471 | TCONS_00000264-exon-sc0000001-1491911889:2528102..2530471 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:2528102..2530471 - |
Blast
The following BLAST results are available for this feature:
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