TCONS_00000260 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00000260
Unique Name	TCONS_00000260
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2875

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000001:2476843..2490300-
coding sequence from alignment at sc0000001:2476843..2490300-

transcript sequence

>TCONS_00000260 ID=TCONS_00000260|Name=TCONS_00000260|organism=Clytia hemisphaerica|type=transcript|length=2875bp
GCAGGACTCGTCCTCCGAGAACGCCCTCGCTCGTAACCAGTGTCCATAAA
TTTTACGTGTCTTCTTCATGAAAGTTCAGTGGGGCTCAACGATAATATAA
TATGTATATTTCCTGCCGCGGCAGACCAAGCTTACATCTTGTCAAAAATA
AGTTGCATAATCGTAGTATGAGCTAGCTGAAATCGACTGaattcattttt
ccaagaaacaaaatggcgtcgGTGCTTCGAGCTGCTTCCCGAACTTTATC
ACATTCAAAAGtcattttgaagaacaaaaCGTCGCTCTATAGTCtgaaag
gaaatatttcaaccaCATCAAAGCTTCTAGTTGCAGGAATTGATGAtgat
ttgtttgatttgacAGAAGAACAAAAGGAGTTTCGTCAAACTGTTCATGA
CTTTTGCACCAAAGAACTTGGTCCTCACGCAGACCAAATTGACAAAGATA
ATGGATGGAGTGATCTAAGggacTTTTGGAAGAAGCTTGGTGAAATGGGT
CTTCACGGCATTACAGTTCCTGAAGCAGACGGAGGTCTCGGCCTGGGTTA
TTTTGAACATCTGATTGCCATGGAAGAGATGTCTCGTCAATCGGCTGCTC
TCGCTCTTAGCTATGGTGCACACTCTAATCTCTGTATCAACCAAATCGCT
CGTAACGGTAACGAAGACCAAAAGGCAAAATATCTTCCTAAGCTGATCAG
TGGAGAGCATTTCGGCTCCTTAGCTATGAGTGAAACAGGATCAGGATCGG
ATGTTGTTtccatgaaaatgaaagcagAGAAACAAGGAGATTATTACATC
TTGAATGGTAATAAATTCTGGATCACAAACGCCCCTGATGCGGATACTCT
AGTCGTGTACGCTCGAACTGATTCTTCAGGCAAACCTGAGCATGGAGTCA
CTACCTTTTTGATCGAGCGGGGAATGGAAGGTTTCTCTACTATGCCCAAA
CTTGACAAACTTGGCATGCGTGGTTCAAATACAGCTGaattgtttttcga
agattgcAAAGTTCCTGCTTCAAACATTATGGGTGAACTTAACAAAGGAA
TCTACGTTTTGTTCAGTGGATTGGATATCGAACGCCTTTTACTGTCAGGT
GGCCCGCTCGGTATTATGCAAGCCGTCATTGATCTAGCTTTCCCGTACGC
GCACATGCGCAAACAATTTAACCGACCAATCGGTAGCTTTCAATTGCTCC
AAGGCAAGATGGCAGACATGTATGTTGAACTTTCCGCTTGCCGTGCGTAC
GTTTATTCTGTCGCGCGTGCACTCGATAAAGGTCATCTCATCAGTAAAGA
TTGTGCGGGAAGTATCTTATATTCAGCCGAGAAATGCACACAAATGGCTC
TCGAGGGAATTCAAATTCTCGGAGGAAACGGATATATTAATGACTATCCG
TCCGGAAGGTATTTGAGGGACGCCAAGTTGTATGAAATTGGTGCTGGAAC
ACAAGAAATCCGGAGATGGTTGATCGGGCGTCGCTTGAACGAAGAATATT
CGgaataatattttttatttttttctgtctttgtcttttaagtcattttt
ctatttAAGTCACGTGCCAAACATCAGGCCCAAGCTAATGAGTCTTCTAA
AGttgactctctttaattcgatcttcaagtgaccaaaacttttttcgaat
taaagaaaaattcgaattacatagagtaatttaaaccattTTCCAGCTGA
GGAGACCAATTTtttggttcgaattatagaaagattttaaTACTGACCGA
ATTCttctgtatttcaaaatgaaacgaTGACTCTTCAGCTAAACGTATTC
GAATCCCACTTTTACTCGAAGAAAATTCTCCTTAGCTCCTTAaagattga
attagagagattAAGCCGtataaatttgaccaaatttacTATGTTCTTTT
TACTTGAAGTGCGATATCATGTGGCTCTTCTGTTTTTCTGTGTTCTCTGA
TTTCCTTTTCTATACaatacgtcacttccaaccaatcagTTGTTGTTGAA
GTGATGTCATGTTAGACATTGCAGGCGTCCATATCATGGAGAAGAAACGT
ATGATTAAGTCGAAAGATTTCCTCTAAGACAATCAAAATAGGTCACTTGT
TCTCAGTCCTCTGTGTTACACAAGTGGACCCTTTGTTATGTTTTAACTTG
ACTTGATTGGCAAGTACTAGCTGgattaaaatgaatgaaaacagTAGTCA
GCCATTAGGCTTGCATGGTGCTATTGCTGTAAGTCAAAAAGCCACTGATA
TAAAATTACGGCGCCGATATTAACGTTCACAAAGTTGCCGGCGACCGAct
gatcaaaacaaagatggtagacAAGCTACCAGTGTGGACAGGACACCCTT
CCAGAAAAATACATTCAGATAAAAAgctaattttgaaaacttcttAATTT
CTTACCGCTGAATAACTGTTGGCTTAAGTAATTTTCCATATACTCCTGGT
TAGACTAGCCTAAAGCCAGATAGGATCCAATTTCGCCAGATATcgtcatc
attttttatttgaacttttttatttaaaatattaTACTTAATATTTTATT
TGGTCCCAACAAAATGTACTTCGCgtattaaaatttttagaatgaaaatg
acattttaatgaatTGATTTTGTCTTGATATCGAAGCATATACTTTATTA
ATCCGATTGATTTTCATAAATTCGCCAGAgtatataattttcaaaatttg
atttttaaaacacCATTATCTAAATTTGTGCGTATTGTGCtattgttatt
tttcaacaaCGGCGAAAGAATGATTTTTAAGGATTTTCCACATCCAGTTT
TCTCAGCTGCGCCCCTGAGAACAAAATATTATCTCTCACTCTCTATGTTT
TACTTCTACTAGCGTAGCATACTAC

Run BLAST on NCBI

protein sequence of TCONS_00000260-protein

>TCONS_00000260-protein ID=TCONS_00000260-protein|Name=TCONS_00000260-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MASVLRAASRTLSHSKVILKNKTSLYSLKGNISTTSKLLVAGIDDDLFDL
TEEQKEFRQTVHDFCTKELGPHADQIDKDNGWSDLRDFWKKLGEMGLHGI
TVPEADGGLGLGYFEHLIAMEEMSRQSAALALSYGAHSNLCINQIARNGN
EDQKAKYLPKLISGEHFGSLAMSETGSGSDVVSMKMKAEKQGDYYILNGN
KFWITNAPDADTLVVYARTDSSGKPEHGVTTFLIERGMEGFSTMPKLDKL
GMRGSNTAELFFEDCKVPASNIMGELNKGIYVLFSGLDIERLLLSGGPLG
IMQAVIDLAFPYAHMRKQFNRPIGSFQLLQGKMADMYVELSACRAYVYSV
ARALDKGHLISKDCAGSILYSAEKCTQMALEGIQILGGNGYINDYPSGRY
LRDAKLYEIGAGTQEIRRWLIGRRLNEEYSE

Run BLAST on NCBI

transcript from alignment at sc0000001:2476843..2490300-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00000260 ID=TCONS_00000260|Name=TCONS_00000260|organism=Clytia hemisphaerica|type=transcript|length=13458bp|location=Sequence derived from alignment at sc0000001:2476843..2490300- (Clytia hemisphaerica)
GCAGGACTCGTCCTCCGAGAACGCCCTCGCTCGTAACCAGTGTCCATAAA
TTTTACGTGTCTTCTTCATGAAAGTTCAGTGGGGCTCAACGATAATATAA
TATGTATATTTCCTGCCGCGGCAGACCAAGCTTACATCTTGTCAAAAATA
AGTTGCATAATCGTAGTATGAGCTAGCTGAAATCGACTGAATTCATTTTT
CCAAGAAACAAAATGGCGTCGGTGCTTCGAGCTGCTTCCCGAACTTTATC
ACATTCAAAAGTCATTTTGAAGAACAAAACGTCGCTCTATAGTCTGAAAG
GAAATATTTCAACCACATCAAAGCTTCTAGTTGCAGGAATTGATGATGAT
TTGTTTGATTTGACAGAAGAACAAAAGGAGTTTCGTCAAACTGTTCATGA
CTTTTGCACCAAAGAACTTGGTCCTCACGCAGACCAAATTGACAAAGATA
ATGGATGGAGTGATCTAAGGTAAATATAGTTTATGAAAATGTTAGATTTT
AAAAACTTGTTTATATTCTCCATTGCAAAAACCTTATTGTGAGATGTTCA
TTCATCATTAAAACTACCCTTTATTAGAAACGTACCGTGAAAAAGGGTAA
CTTGCATCATTGGAGGCTAACATGCATAGCCCTCAATTGAAAGACCCAGC
TGGTCATTAAAATACAAAAATAAATCAAAACAAAAATGGTAGAGTAGAGC
TGCGAGCGGAGCTGCGTAGTTGTATTTTAATGACCAGCCAGGTCATTCAT
TTGAGGGCTATGCATGTTAGCCTCCATTGATGCAAGTTACCCTTTTTCAC
GGTAGTCGTCTAAAAAAACGGCTATTCTTTTTTGGAATCAACCTTACAAT
CTAGTTTTTATATTTATAAAAACTAGATTGCTGACGTATGGAAAGGAATG
TCGGCGTGACTGATCCTTTTGTTTCGACAGTTATATCAAAATGCCTCGAA
AATGTCAATATGAAAATTGCTGCGTAATCAGAGAACTTATGTCTCGCTCA
TTATAAAAAGGCAGAGACAAACTTTCAATAATTGGATTGTAACATTGAGT
TAAGTCCCTATTGTTAAGTCACCAGGGGGTAAATAAAACAGACCTTGATA
CATTTATCGTTCGTTTCAACTTGACGATTCGTTTAAAACTCAGCCTCCTA
AATATTTACAGTGTGGCTCGAATCTCTCAGATCCTTGGTTAGAAAAAGCT
ATACCTGTTTACTTTTTTCTTGCCAGATTCAACAAGCCATCAACCAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAGCTAAAAAGGTTACGGGTTTTGG
GCAATCGAGGCAAAAATCAGCAAAAAGCTGGTGTTTTCCGTAAATCTGAG
AATCGCGATAAGATCCTCACTGATTTAGGGTAGGTAAAATATGTACAAAG
AAATTCATACTTTTCCAACCCGGCCAAACTTTAAAAAAAGAAGCGAACAA
TAAAATATAATTACCCTTTCCAAATAAACCTCTTCGGTGGCGAGCGTAGT
CTACTCTGATGTACTGTAATTGTAAAATTTATGTGATGGGAGTTTGGCAT
AGTAATGAAATGTTGTTTGGGGAATTACTCTGTTCTCTGGAATTTCGATT
GCATTTATTCAGGTTGATTTTTTATGACTTCTAATGGTAGTTTTTCTAAC
GAGTTTGATTACTCTGTTCTCACACTTATGTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTCACACTTATGT
CTTTTTTTTTCGTGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAA
GACAGGTAAGAAGGCATATTGATGTAACTGTTCGATAATAACATCAAAGC
GGGAACTAATTTTCTTCTCGTTTCTTTCTTTCCTTTTTCTTTCTAATAAA
TTCAAGCTTTCCCTCACACCCTCCAAGCGTGGTTAGGGGTCACTCTAGCC
TGGATATCCAGCCCGTAAACTTTTTTTTGATTTTGATATTTCTTATGTTT
ACAGTCTGGTTTATCTAGATTGTCTGCATTCTCATCTGAGGATGATTATG
CGGATATTCTGATTGGTTGGTCCAAGCGAATCAGAGATCTGAATGGTGGC
GCGCGTATAAGAAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTAGATGTTCTGGT
TGTTTTCTTTTCAATTACTTGCTTAGATATTCTTGTTTTAATCTTCTTAA
TGACTTGGTTGCATCGTGTAAAGAACTAAAAAGGTATATTTTTATTTTGC
TTCAATTCTTCTTTTCTGTTTGCCAATTTCGTATTGCTGTTTTGGGTTGG
ATATTTTGAAAAAAATTTTCTCCAAAATTTACTTTGCACTTTGTCTAACA
GACTTTCCACCACACTGTCTATATTTTATGGTCAAGGCTGCCATTCTAAA
TTGATTTATCACTGCTGGGGTACCATCTTGAAATTATACATGTCATTATG
TGCATATATTTATTTGCAGCCATGGGATTCATGCAGGAGAATCTGTCAAC
GGGGGTTCACCTGATTTCTAGGTGAACCAAGCTCTATAATTTTAGAACTT
TGTCTGGCTGAGGTAAAACTTATTTTTTCTAAAATTTTGAGCTTGGATAT
CCAGGCTAGGGTCACTCACATATCGATGTTTTCTGCAACTAACGTCGTTG
TGACGCGAGGGGGTAGGGGGGTCAGAGCCTATGACGCTAAGAAATTTCAA
CAGAATATCGATTTTCAAACCTGTAACATTTTGTATTCCATCCTTCGCTA
CACCTGCCATCTTAATTCAAACGCATAAAATATAACAGAGATGATATCCG
ATACCCTTCCGTTACATTTGTAGGAATATGTTATTATCTCCCTAATCATA
AAAACAGAGATACCGCAATAAAAAATAGATGGGCCGTATTTTGATATACA
AGGGCCGCGCTGACGGACCGTCTACATAAATATGACAAAACAACGAGCCG
TTTGTCTGGGGACAAACAAATGTTAAAGTCATAAGTCAAAACCACTTGTT
TTAAAACCGTGCGAAACGAAGCACAAAAATCAATGTGGCTGGAATATCAT
TATCTGTAATAGAGAAGAAAAATTACTTTCATCGTTTTTTGGTATATTTA
TATAAATGACGCTAAGAAAGGGGGGTGGGGGGGTTCTTCAGATAGCGTCA
CAATGACGTTAGTTGCAGGAAAAATCGTTACCATAAAAACTCTTTCACAA
GCTCCTAAGACTTTCAAAACTACTAAAAACCACATCAAAACATCAGCCAC
ATGTATTTGGGCGATTTGCACTAAATCTGTACCGTCCCGTCCGAAATCAT
TTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
CTGTCCGAAATCATAACTTTTCAAATATGTTTCAATTTGTAATAAAATGA
ATGTTTAACATTCAGGAAGTTATTAGCAAGACCTAGTGGTAAGAAAAATG
TTTAAACAGGCCAATTAAAGTAAGTTTTTATACCTTTATTTTAACCTTGA
AAATAGGAATTGATTTCGGACGGGACAATTTTCCTGTAAAAATAGGTATT
GTATTAAAACCACTACCGGAACAAAAAGAGTGGAAGATTCTCAAGTATTT
TCTATTTGGAATAGTTGTATATTTACTTGTATACTTACTGATAATATGCA
GAAGGAAAAAGTTTAGCAAAACTTGAAATAAAACAGATTTTTATGAAAAT
GATTTCGGACGGGACAGGAAAAATTTAGTGCAAATCACCCTGAAAAAAGA
TGAAAAGGTGATACTATGATAATTTGAGGAAAGCCTTTATAGGAACAATT
TCAGGCTGTTCTACAGCTTCCTTACTTCCTCAATACATTTTTCTGATGTA
TTCTAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTAAATAACATGTATTACTTTTTTGTAATTTAATGCGTTATG
TATTGATGTTATGTTATGTATATGTTATGATCTTATTATCTTTTTTCCGG
TCTGCACTTTAGTGACCTGTGACCTGTTGACCTGTGACCTGTGACCTGCG
CTTCGAACTAGCCGCATTTTGTTTTGAAATGAATCTATGTTTTCAGTTTC
ATTTGTTTTCCTTTTTTCTGCAGAGTCAGCTTTTCCATAAATTATGCCCG
CGCCTCGAAAATATCAAAATGCGCGCGAAAGTACTGCTAAGTAATACGCC
GAAAGCTGGCCAATCAGGCCGAACCTGCATTGCAGGGAAAAATGTCCCTG
CAGGCAAGTTACCTGCGCCAAGCGTTAAACCAACAGCAAAAATATCATAA
ACTAGACTGAAAAAAGTTTAACGCTTGGATTCCCAGGCTAATGACAACCA
TGCAAGAAAGATAAGCAAACAGTTGGATCAAGTGTCAAACATTTTGACCC
GGAAATCAATTATCATTCTGTCTTTAAAGTATAAAACGAGAATGATTCTG
AAGGAAGTTATTTGACGATTCTCTTACAAAGAATCGCTCGCTCACTCGCT
GGCTGAAAGTGAAAGTGAAAGTAGTGAAACTGAAACTGAAACTGAAACTG
TCAGTCACCAAACGAAGGCGCAAACGCCTATCTGTTCTTCTATATAACAG
CCTTGAATAATCCCTTGTGGTAAAAAAAAGATTGAAGAAAAAACAACTTA
AAAAAGTTCTTATTAAGTGATGCTATCATATAGCTTATCTAAACCTTACA
CAGAGAGGAGGTAATATATGCTAGTTACTTGTTTGATTGACCTTCATTAT
AATAGAAAGAGAATTAAAAAAGGAATTTGAAGAATTGAAATAATTGACAT
CCAGCGGGATCAAACTCAGAAACCCATGCTTATGAGACAGACGCTCTAAC
CGGTTGAGCTAACCACGCTTGGAAGGTGTGAGGGAAAGCTTGAATTTATG
AGAAAGAGAAGGAAAGAAAGAAACGAGAAGAAAATTAGTTCCTGCTTTGA
TGTTATTATCGAAACAAAGGGATCAGTCACGCCGACATTCTTTTCCACAT
GTCAGCAAACTAGATTGTAAGGTTGATTCTAAAAAAGAATAGCCGTTTTT
TAGACGACTACGTTTAGACCTTTTTGCCTTGCCTTTCCATGCCATCCACC
ATCTTCGTGAATTGTATGCAAAAGAATGGTGCTGAATTTGCCTTGGTTAG
ATTTCTTACTCTCGACTAAATTGTCATGATGCAAGGCTGGTTGCAAGTAC
CGTATATTCTAGCCTGGCGGTTTAGTGGAAATACCTCCATTTAAAGTCTA
TTAAGGTTCACAATAATGACTTTCTTTTTATGGAAACCAAACAAGTAAGA
ACAAGTCATTAAAACGAAAAGTCAGCGCTCCGTTGTTGTGACATGGGTAA
TTACAGTAATTTTCACAGTTTCTTGTAAATTCTACGTCATTTTTTAAACC
TCTTAGTATGGACAACGTGTCATTCCACAGTAGACCTAACACTTCATACA
AAAATTACGGGAAACGCATATTTGGACTTTGTACCCTATGCTGCACGCAA
GCACTTAAGCTAAAGCGGGAATATCAAATAAAGCATCTTCTGAAAATTTC
ATTCTTCCCCATAAACAAAGAAGCTTTTGTTTTCTGATAGTCTTTTTAAT
CTGCCATGAAGTGTTATATATAAAATTCCTTATAGAAAGACACATTCTCC
TAGGAAGAGGCTTCAAAAAAATGACGTAGAAAAAAGTGTTAAAAAGTATG
TCATTTTATCTTAACAATTTTGTAAACTACGTCACAACCACAGAGCGCTG
ACTTTTAGTTTTATGACTTGTTCTCACTCATTTGGTTTCTGGTTTTGTTT
TGGTAATGAAACTGATAAAAAGAAAGTTGTTATTGTGAACTTTGAACATG
CTTTTTAAAAATCGAGGTTCTTCCACTTAATTCATAATTGAAGTTGTTGA
CAGACTTTCTGAATTTTGGAAGCCCAGAGGCAAACATACATAATCAATTT
ACCAAAAAAACTCTTTCACAACGAGCTCTAAAGACTTTCAAACCTACTAA
AACCACATTAAAACACCAGCCACCCACATGTATTTAGACTCCCAGTCAAC
AGCCATTTTATTTCTAGATGAATCTATGTTTTCATTTTCATTTGTTTTCC
TTTTTTCTACATAGTCAGCTTTTTCCATAAATTATTCGCAAAATGATCAA
AATGCGCGCGAAAGTACTGCTAAGTAATACGCCGAAAGCTGACCAATCAG
GCCAAACCTGCATTGCAGGGAAAAATCTCCCTGCAGGCGAGTTAGTTACC
TGGGCCAACATTAAACAAGCAGCAAAAATATCATAAACTAGACTGTGAAA
AAAGTTTAACACTTGGATTCCCCAGGCTACGTAGATTTGTCTTCTATCGA
AATCCTTTAATCTCAACATAAGCACAACTCTATGCACATACTGAATTTGG
ACGATCTTCTATGTGATGTTTTTTCGCAAACTTTATTCCGCATTGGGTAC
AAAATCCAAAAATTGCGTTTCCTGTAAATTTTATATGAAGAGATAGGGCT
ATACTGCCTATCTCCTATAACTAATTAGCATGCTTTCCACAAAGATATAA
AAATCATAACAACTTTTTGCATGCAAGGAATTTTCTGCCCTGCCGCCCTG
TCTCGACAATCTAAATGAAAAATAGTGAGTTGTATGTGCCTTAGTGCCTA
GAGTGTGTGCTTACCATAAAAAATAAGGAAGGGAAACCAGGTCAGGTCCT
AAGCGTGCAAATCATTTTGATCACACATACACTTGTTAGATAAGAGGAAT
GCCAAGAATTTCATAAAAGGTTCACAAACGTCTTGAATATTTTGCACATC
CGGTGTCAAAATTAAAATTAGATTGGGACATCAGATTTTTTTGTTTTCAC
CTGTTTGGATTTGCCTGATATGAAATGGATATTTTTTGGTAAAAATACGA
TAATTAAGTTCCTGCAAAATGCAATGTTTTTAAACAAAATTTTCACCCTG
AAAATCAGTTCCACAAAAATTAGTTCCATTGAGTTTATCTTGGATGAAAA
ATTAGTATCAGCTGGATTTACAAAAACATTTTTCAACCCCTGATCCAACT
AGCATCAAATGCAAAGTGTTCTTTTCAAATAAATATGCTCTGAAACAATG
CAAGATCCTATCCAAATTTCTTCTTATAAGTGATATTGAGCCACCAGAGA
ACTTGTACAGGAAAAATGAAAAGAAATTATAGGAGCCACTTTTGAAATAT
ATTTACCCAAAATTAACATTCTTTCGGTAAAATTTCCTTGAGAGTTACTT
TGAGCAAAGTTTTTGGAGAAAGGACGCTATTAAGATTGTTAAGAAGCTGC
TTTTCTAGAAATTTACCAACCATTGTATCAACAATTCATGTTTAGTTTGT
GTCCTAATTAATAGTTTCAGAGCTGAGAAGGGGTACCTAAAAACTCATTC
TAAAATAATGCAGAAATTCGGGTCCACTTTATGGGGGTCATGGAGCGTGG
AAAAATTCGGGGGGGGGAGGGACACTCAAGGTAAACAACCTACCGTATCA
ACAACCTACCGGGTCCTTTTTCCAATCTTCCCAAAGTGCACTGTAAAGGT
CGAAATGAGCAAAGATGAGAAAAAGTGCTCTCTAAATGTGTAAAACCTGA
CCATATTTGTATCAAAATGGTCTAAAATCTTCAAGAAAGTACACCGATAG
CACAAGGGTCAATTTTTGCCCCCAAATTTACTCAAATTTGACTAAGGGTC
CGATTTCAAAGGCCTAATTTTGAACCGCAGTAGGTCGTTTTTGAATCGAT
TTTGAATCACTGTGAAAATGATTGACATATTGAATTTAAATATCCAATTA
GGATATCATAATTTAATGGATATAATACTAACAGAAATAAACACTAAACA
CGAGAAATCTGACTATTAATGGCAAAGTTGATTTCTAAATTATGAACTAA
AATGCCCTAAATTTTAGCTAACCTAAGTTTCAACCATTTATCAAAAATAT
TTAATATAACACTAGTCCAGAAAATTCTTGCATTCTTTTGTTTTTTTTTC
AGGGACTTTTGGAAGAAGCTTGGTGAAATGGGTCTTCACGGCATTACAGT
TCCTGAAGCAGACGGAGGTCTCGGCCTGGGTTATTTTGAACATCTGATTG
CCATGGAAGAGATGTCTCGTCAATCGGCTGCTCTCGCTCTTAGCTATGGT
GCACACTCTAATCTCTGTATCAACCAAATCGCTCGTAACGGTAACGAAGA
CCAAAAGGCAAAATATCTTCCTAAGCTGATCAGTGGAGAGCATTTCGGCT
CCTTAGCTATGAGTGAAACAGGATCAGGATCGGATGTTGTTTCCATGAAA
ATGAAAGCAGAGAAACAAGGAGATTATTACATCTTGAATGGTAATAAATT
CTGGATCACAAACGCCCCTGATGCGGATACTCTAGTCGTGTACGCTCGAA
CTGATTCTTCAGGCAAACCTGAGCATGGAGTCACTACCTTTTTGATCGAG
CGGGGAATGGAAGGTTTCTCTACTATGCCCAAACTTGACAAACTTGGCAT
GCGTGGTTCAAATACAGCTGAATTGTTTTTCGAAGATTGCAAAGTTCCTG
CTTCAAACATTATGGGTGAACTTAACAAAGGAATCTACGTTTTGTTCAGT
GGATTGGATATCGAACGCCTTTTACTGTCAGGTGGCCCGCTCGGTATTAT
GCAAGCCGTCATTGATCTAGCTTTCCCGTACGCGCACATGCGCAAACAAT
TTAACCGACCAATCGGTAGCTTTCAATTGCTCCAAGGCAAGATGGCAGAC
ATGTATGTTGAACTTTCCGCTTGCCGTGCGTACGTTTATTCTGTCGCGCG
TGCACTCGATAAAGGTCATCTCATCAGTAAAGATTGTGCGGGAAGTATCT
TATATTCAGCCGAGAAATGCACACAAATGGCTCTCGAGGGAATTCAAATT
CTCGGAGGAAACGGATATATTAATGACTATCCGTCCGGAAGGTATTTGAG
GGACGCCAAGTTGTATGAAATTGGTGCTGGAACACAAGAAATCCGGAGAT
GGTTGATCGGGCGTCGCTTGAACGAAGAATATTCGGAATAATATTTTTTA
TTTTTTTCTGTCTTTGTCTTTTAAGTCATTTTTCTATTTAAGTCACGTGC
CAAACATCAGGCCCAAGCTAATGAGTCTTCTAAAGTTGACTCTCTTTAAT
TCGATCTTCAAGTGACCAAAACTTTTTTCGAATTAAAGAAAAATTCGAAT
TACATAGAGTAATTTAAACCATTTTCCAGCTGAGGAGACCAATTTTTTGG
TTCGAATTATAGAAAGATTTTAATACTGACCGAATTCTTCTGTATTTCAA
AATGAAACGATGACTCTTCAGCTAAACGTATTCGAATCCCACTTTTACTC
GAAGAAAATTCTCCTTAGCTCCTTAAAGATTGAATTAGAGAGATTAAGCC
GTATAAATTTGACCAAATTTACTATGTTCTTTTTACTTGAAGTGCGATAT
CATGTGGCTCTTCTGTTTTTCTGTGTTCTCTGATTTCCTTTTCTATACAA
TACGTCACTTCCAACCAATCAGTTGTTGTTGAAGTGATGTCATGTTAGAC
ATTGCAGGCGTCCATATCATGGAGAAGAAACGTATGATTAAGTCGAAAGA
TTTCCTCTAAGACAATCAAAATAGGTCACTTGTTCTCAGTCCTCTGTGTT
ACACAAGTGGACCCTTTGTTATGTTTTAACTTGACTTGATTGGCAAGTAC
TAGCTGGATTAAAATGAATGAAAACAGTAGTCAGCCATTAGGCTTGCATG
GTGCTATTGCTGTAAGTCAAAAAGCCACTGATATAAAATTACGGCGCCGA
TATTAACGTTCACAAAGTTGCCGGCGACCGACTGATCAAAACAAAGATGG
TAGACAAGCTACCAGTGTGGACAGGACACCCTTCCAGAAAAATACATTCA
GATAAAAAGCTAATTTTGAAAACTTCTTAATTTCTTACCGCTGAATAACT
GTTGGCTTAAGTAATTTTCCATATACTCCTGGTTAGACTAGCCTAAAGCC
AGATAGGATCCAATTTCGCCAGATATCGTCATCATTTTTTATTTGAACTT
TTTTATTTAAAATATTATACTTAATATTTTATTTGGTCCCAACAAAATGT
ACTTCGCGTATTAAAATTTTTAGAATGAAAATGACATTTTAATGAATTGA
TTTTGTCTTGATATCGAAGCATATACTTTATTAATCCGATTGATTTTCAT
AAATTCGCCAGAGTATATAATTTTCAAAATTTGATTTTTAAAACACCATT
ATCTAAATTTGTGCGTATTGTGCTATTGTTATTTTTCAACAACGGCGAAA
GAATGATTTTTAAGGATTTTCCACATCCAGTTTTCTCAGCTGCGCCCCTG
AGAACAAAATATTATCTCTCACTCTCTATGTTTTACTTCTACTAGCGTAG
CATACTAC

Coding sequence (CDS) from alignment at sc0000001:2476843..2490300-

>TCONS_00000260 ID=TCONS_00000260|Name=TCONS_00000260|organism=Clytia hemisphaerica|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000001:2476843..2490300- (Clytia hemisphaerica)
GGACTTTTGGAAGAAGCTTGGTGAAATGGGTCTTCACGGCATTACAGTTC
CTGAAGCAGACGGAGGTCTCGGCCTGGGTTATTTTGAACATCTGATTGCC
ATGGAAGAGATGTCTCGTCAATCGGCTGCTCTCGCTCTTAGCTATGGTGC
ACACTCTAATCTCTGTATCAACCAAATCGCTCGTAACGGTAACGAAGACC
AAAAGGCAAAATATCTTCCTAAGCTGATCAGTGGAGAGCATTTCGGCTCC
TTAGCTATGAGTGAAACAGGATCAGGATCGGATGTTGTTTCCATGAAAAT
GAAAGCAGAGAAACAAGGAGATTATTACATCTTGAATGGTAATAAATTCT
GGATCACAAACGCCCCTGATGCGGATACTCTAGTCGTGTACGCTCGAACT
GATTCTTCAGGCAAACCTGAGCATGGAGTCACTACCTTTTTGATCGAGCG
GGGAATGGAAGGTTTCTCTACTATGCCCAAACTTGACAAACTTGGCATGC
GTGGTTCAAATACAGCTGAATTGTTTTTCGAAGATTGCAAAGTTCCTGCT
TCAAACATTATGGGTGAACTTAACAAAGGAATCTACGTTTTGTTCAGTGG
ATTGGATATCGAACGCCTTTTACTGTCAGGTGGCCCGCTCGGTATTATGC
AAGCCGTCATTGATCTAGCTTTCCCGTACGCGCACATGCGCAAACAATTT
AACCGACCAATCGGTAGCTTTCAATTGCTCCAAGGCAAGATGGCAGACAT
GTATGTTGAACTTTCCGCTTGCCGTGCGTACGTTTATTCTGTCGCGCGTG
CACTCGATAAAGGTCATCTCATCAGTAAAGATTGTGCGGGAAGTATCTTA
TATTCAGCCGAGAAATGCACACAAATGGCTCTCGAGGGAATTCAAATTCT
CGGAGGAAACGGATATATTAATGACTATCCGTCCGGAAGGTATTTGAGGG
ACGCCAAGTTGTATGAAATTGGTGCTGGAACACAAGAAATCCGGAGATGG
TTGATCGGGCGTCGCTTGAACGAAGAATATTCGGAATAAATGGCGTCGGT
GCTTCGAGCTGCTTCCCGAACTTTATCACATTCAAAAGTCATTTTGAAGA
ACAAAACGTCGCTCTATAGTCTGAAAGGAAATATTTCAACCACATCAAAG
CTTCTAGTTGCAGGAATTGATGATGATTTGTTTGATTTGACAGAAGAACA
AAAGGAGTTTCGTCAAACTGTTCATGACTTTTGCACCAAAGAACTTGGTC
CTCACGCAGACCAAATTGACAAAGATAATGGATGGAGTGATCTAAGGGAC
TTTTGGAAGAAGCTTGGTGAAATGGGTCTTCACGGCATTACAGTTCCTGA
AGCAGACGGAGGTCTCGGCCTGGGTTATTTTGAACATCTGATTGCCATGG
AAGAGATGTCTCGTCAATCGGCTGCTCTCGCTCTTAGCTATGGTGCACAC
TCTAATCTCTGTATCAACCAAATCGCTCGTAACGGTAACGAAGACCAAAA
GGCAAAATATCTTCCTAAGCTGATCAGTGGAGAGCATTTCGGCTCCTTAG
CTATGAGTGAAACAGGATCAGGATCGGATGTTGTTTCCATGAAAATGAAA
GCAGAGAAACAAGGAGATTATTACATCTTGAATGGTAATAAATTCTGGAT
CACAAACGCCCCTGATGCGGATACTCTAGTCGTGTACGCTCGAACTGATT
CTTCAGGCAAACCTGAGCATGGAGTCACTACCTTTTTGATCGAGCGGGGA
ATGGAAGGTTTCTCTACTATGCCCAAACTTGACAAACTTGGCATGCGTGG
TTCAAATACAGCTGAATTGTTTTTCGAAGATTGCAAAGTTCCTGCTTCAA
ACATTATGGGTGAACTTAACAAAGGAATCTACGTTTTGTTCAGTGGATTG
GATATCGAACGCCTTTTACTGTCAGGTGGCCCGCTCGGTATTATGCAAGC
CGTCATTGATCTAGCTTTCCCGTACGCGCACATGCGCAAACAATTTAACC
GACCAATCGGTAGCTTTCAATTGCTCCAAGGCAAGATGGCAGACATGTAT
GTTGAACTTTCCGCTTGCCGTGCGTACGTTTATTCTGTCGCGCGTGCACT
CGATAAAGGTCATCTCATCAGTAAAGATTGTGCGGGAAGTATCTTATATT
CAGCCGAGAAATGCACACAAATGGCTCTCGAGGGAATTCAAATTCTCGGA
GGAAACGGATATATTAATGACTATCCGTCCGGAAGGTATTTGAGGGACGC
CAAGTTGTATGAAATTGGTGCTGGAACACAAGAAATCCGGAGATGGTTGA
TCGGGCGTCGCTTGAACGAAGAATATTCGGAATAAATGGCGTCGGTGCTT
CGAGCTGCTTCCCGAACTTTATCACATTCAAAAGTCATTTTGAAGAACAA
AACGTCGCTCTATAGTCTGAAAGGAAATATTTCAACCACATCAAAGCTTC
TAGTTGCAGGAATTGATGATGATTTGTTTGATTTGACAGAAGAACAAAAG
GAGTTTCGTCAAACTGTTCATGACTTTTGCACCAAAGAACTTGGTCCTCA
CGCAGACCAAATTGACAAAGATAATGGATGGAGTGATCTAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000141	XLOC_000141	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00000260-protein	TCONS_00000260-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00000260-exon-sc0000001-1575043694:2489832..2490300	TCONS_00000260-exon-sc0000001-1575043694:2489832..2490300	Clytia hemisphaerica	exon
TCONS_00000260-exon-sc0000001-1575043694:2476843..2479248	TCONS_00000260-exon-sc0000001-1575043694:2476843..2479248	Clytia hemisphaerica	exon
TCONS_00000260-exon-sc0000001-1510915933:2489832..2490300	TCONS_00000260-exon-sc0000001-1510915933:2489832..2490300	Clytia hemisphaerica	exon
TCONS_00000260-exon-sc0000001-1510915933:2476843..2479248	TCONS_00000260-exon-sc0000001-1510915933:2476843..2479248	Clytia hemisphaerica	exon
TCONS_00000260-exon-sc0000001-1491911889:2489832..2490300	TCONS_00000260-exon-sc0000001-1491911889:2489832..2490300	Clytia hemisphaerica	exon
TCONS_00000260-exon-sc0000001-1491911889:2476843..2479248	TCONS_00000260-exon-sc0000001-1491911889:2476843..2479248	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000001	supercontig	sc0000001:2476843..2490300 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
79.7783	79.2239	75.6233	80.0295	64.2463	49.9316	54.5086	59.888	46.4706	45.0185	48.8729	51.058	42.6874	48.7502	36.3615	39.8405	56.4628	53.9816	23.944	24.0103	44.299	43.7925	58.5581	57.1782	45.649	50.6103	35.3266	34.0757	33.8387	33.2122

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013786	AcylCoA_DH/ox_N
IPR009075	AcylCo_DH/oxidase_C
IPR006091	Acyl-CoA_Oxase/DH_cen-dom
IPR006089	Acyl-CoA_DH_CS
IPR034183	IVD
IPR009100	AcylCoA_DH/oxidase_NM_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0050660	flavin adenine dinucleotide binding
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
GO:0003995	acyl-CoA dehydrogenase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0008152	metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0003995	acyl-CoA dehydrogenase activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors

Blast

[Close]

BLAST of TCONS_00000260 vs. Swiss-Prot (Human)
Match: IVD (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1)

HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0
Identity = 257/400 (64.25%), Postives = 317/400 (79.25%), Query Frame = 3

Query:  294 LKGNISTTSKLLVAGIDDDLFDLTEEQKEFRQTVHDFCTKELGPHADQIDKDNGWSDLRDFWKKLGEMGLHGITVPEADGGLGLGYFEHLIAMEEMSRQSAALALSYGAHSNLCINQIARNGNEDQKAKYLPKLISGEHFGSLAMSETGSGSDVVSMKMKAEKQGDYYILNGNKFWITNAPDADTLVVYARTDSSGKP-EHGVTTFLIERGMEGFSTMPKLDKLGMRGSNTAELFFEDCKVPASNIMGELNKGIYVLFSGLDIERLLLSGGPLGIMQAVIDLAFPYAHMRKQFNRPIGSFQLLQGKMADMYVELSACRAYVYSVARALDKGHLISKDCAGSILYSAEKCTQMALEGIQILGGNGYINDYPSGRYLRDAKLYEIGAGTQEIRRWLIGRRLN 1490
            L G +S  +  L+  +DD +  L+EEQ++ RQT+  F  + L P A +ID+ N + +LR+FWK+LG +G+ GIT P   GG GLGY EH++ MEE+SR S A+ LSYGAHSNLCINQ+ RNGNE QK KYLPKLISGE+ G+LAMSE  +GSDVVSMK+KAEK+G++YILNGNKFWITN PDAD L+VYA+TD +  P   G+T F++E+GM GFST  KLDKLGMRGSNT EL FEDCK+PA+NI+G  NKG+YVL SGLD+ERL+L+GGPLG+MQAV+D   PY H+R+ F + IG FQL+QGKMADMY  L ACR YVY+VA+A D+GH  +KDCAG ILYSAE  TQ+AL+GIQ  GGNGYIND+P GR+LRDAKLYEIGAGT E+RR +IGR  N
Sbjct:   21 LAGFVSQRAHSLLP-VDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFN 419

The following BLAST results are available for this feature:

BLAST of TCONS_00000260 vs. Swiss-Prot (Human)

BLAST of TCONS_00000260 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IVD	0.000e+0	64.25	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Hom...	[more]

You are here

TCONS_00000260 (transcript) - C. hemisphaerica