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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000188 ID=TCONS_00000188|Name=TCONS_00000188|organism=Clytia hemisphaerica|type=transcript|length=782bp
gtaacatttggcaagtcagtgtggaaacaatttgtagccatgtgctacct
aaattgtgcagactaccgggctaccttaatggagcagcctgtttgtttct
acaaaaccttagaaagataacagtaacattggcaagtcagtgtggaaaca
atttgtagtcatgtgctacctaaattgtgcagactaccgggctaccttaa
tggagcagCCCGTTTGCTTCTGCGTAAAAACCTTGAAtactattttggac
tttttttctGGTACAAGCCATTTATATTGAAATCAAAGCTCTtcgtattt
ttttttcaggaaaagtgAAGTGCAAACCCGGAAGTGAAACGTCATCTACA
TGTCTACATCTCTACAAGTCGTCTTCAAAAGGAGACTGATCGACCGAACG
CAAGAAAGAAAGAACTGTTTGCCTGAGATGCCAAGACTAATGGTAGAAGT
TAGGACATGGAAATCGTTTATCGATGTACGGTAGCAAGATTTTGACGGTG
GAGCCGCTTCCACTCGGTTTCTTATGTTTAATGGTTTTGTTTTACTTGCT
CCACGAATACTATCCAACAGACAGAGCTGATTACCTGCATGCATGACAAT
CTAGCACCGGATCGTCTTCAAAGACACTTGTTGTAATGATTCTCATTACG
AAAGCTTTAATAATGCAGTAAAAGGACTTCAGAATTTCTACCCAGCGATT
TCGACACCTCTATGTCACAGAGCCGCTGGGACCCCCGcccaactggaaaa
tttgacaaaaatttcgtgcCGGTAGGAAAAAA Run BLAST on NCBI transcript from alignment at sc0000001:1048928..1049884- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000188 ID=TCONS_00000188|Name=TCONS_00000188|organism=Clytia hemisphaerica|type=transcript|length=957bp|location=Sequence derived from alignment at sc0000001:1048928..1049884- (Clytia hemisphaerica)
GTAACATTTGGCAAGTCAGTGTGGAAACAATTTGTAGCCATGTGCTACCT
AAATTGTGCAGACTACCGGGCTACCTTAATGGAGCAGCCTGTTTGTTTCT
ACAAAACCTTAGAAAGATAACAGTAACATTGGCAAGTCAGTGTGGAAACA
ATTTGTAGTCATGTGCTACCTAAATTGTGCAGACTACCGGGCTACCTTAA
TGGAGCAGCCCGTTTGCTTCTGCGTAAAAACCTTGAATACTATTTTGGAC
TTTTTTTCTGGTACAAGCCATTTATATTGAAATCAAAGCTCTTCGTATTT
TTTTTTCAGGAAAAGTGAAGTGCAAACCCGGAAGTGAAACGTCATCTACA
TGTCTACATCTCTACAAGTCGTCTTCAAAAGGTAAGAAAATTTCTGTAAT
TGTTTACCCAGCACCTTCAATATTTGCGTCTTCATTACTCCAAGTACAAA
ATCTCTTCAGAGTCATTTAGCAAACGTAGGTGGAAAGAAGCACTTACTTA
TCTTTGAGTTATGTTGGCTTGTGAAGTCTAATATATTCTAATTTCCTTTT
CTACAGGAGACTGATCGACCGAACGCAAGAAAGAAAGAACTGTTTGCCTG
AGATGCCAAGACTAATGGTAGAAGTTAGGACATGGAAATCGTTTATCGAT
GTACGGTAGCAAGATTTTGACGGTGGAGCCGCTTCCACTCGGTTTCTTAT
GTTTAATGGTTTTGTTTTACTTGCTCCACGAATACTATCCAACAGACAGA
GCTGATTACCTGCATGCATGACAATCTAGCACCGGATCGTCTTCAAAGAC
ACTTGTTGTAATGATTCTCATTACGAAAGCTTTAATAATGCAGTAAAAGG
ACTTCAGAATTTCTACCCAGCGATTTCGACACCTCTATGTCACAGAGCCG
CTGGGACCCCCGCCCAACTGGAAAATTTGACAAAAATTTCGTGCCGGTAG
GAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000188-exon-sc0000001-1575043694:1049504..1049884 | TCONS_00000188-exon-sc0000001-1575043694:1049504..1049884 | Clytia hemisphaerica | exon |
| TCONS_00000188-exon-sc0000001-1575043694:1048928..1049328 | TCONS_00000188-exon-sc0000001-1575043694:1048928..1049328 | Clytia hemisphaerica | exon |
| TCONS_00000188-exon-sc0000001-1510915933:1049504..1049884 | TCONS_00000188-exon-sc0000001-1510915933:1049504..1049884 | Clytia hemisphaerica | exon |
| TCONS_00000188-exon-sc0000001-1510915933:1048928..1049328 | TCONS_00000188-exon-sc0000001-1510915933:1048928..1049328 | Clytia hemisphaerica | exon |
| TCONS_00000188-exon-sc0000001-1491911889:1049504..1049884 | TCONS_00000188-exon-sc0000001-1491911889:1049504..1049884 | Clytia hemisphaerica | exon |
| TCONS_00000188-exon-sc0000001-1491911889:1048928..1049328 | TCONS_00000188-exon-sc0000001-1491911889:1048928..1049328 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1048928..1049884 - |
Blast
The following BLAST results are available for this feature:
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