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TCONS_00000172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000172
Unique NameTCONS_00000172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1241

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000172 ID=TCONS_00000172|Name=TCONS_00000172|organism=Clytia hemisphaerica|type=transcript|length=1241bp
GTTGATGATTACCATAATCTtcaccttttgtgacctacccccttgtaatt
ccaggcaattttaggatcatacccctctggaattccgaatttttacaaat
tttcaatcattacccccttggaattccgcttatttttgacggattttcta
CCCTTATgaaattccactgcatttcaaaccttacccccttggaacggaaa
tggacctcctcaacagggggtgtacgattttttttctggaaaagcccatt
attgGTGTGATATTGAAATTTGTCACCTTTATCATTTTTCTAGAGATAAC
AGTGGGAAACGGTTGATGGATTATCTGTTTCTGATACCAAAGGTGTCTGG
AAATATCGTTGAccatttcaaaattattgaagATGGTTTCCATATCAATA
CAGCTGATCACCAGgAATCATCAACATGTTCGTCAGTAATTCAAGTGACG
AATAATTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCC
GCCGAACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATG
gTCAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAAT
AATGATAAAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATA
TCGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAAT
CACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGC
AAATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATAT
TGTCGACTTTGAATATCTTTCAACGGTCACTCCACCAATGATGTCGGTGT
TTTCAGAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGA
TTTACTGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAA
TGTCTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAGgTTGACCTTCT
TGACGGAAGAAATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAA
ATCACGGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAAATGTT
ATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGAACTGA
CCACTATGGCTGATCTCGGTGGAAATTCCACTTTGGAGTACTTGGATGTC
AGTTACAATCAAATTACTGGTATGGAAGGATTCAAAGTAAG
Run BLAST on NCBI

protein sequence of TCONS_00000172-protein

>TCONS_00000172-protein ID=TCONS_00000172-protein|Name=TCONS_00000172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MDYLFLIPKVSGNIVDHFKIIEDGFHINTADHQESSTCSSVIQVTNNFRF
LDKHRIKTTTTPPNKNDVKTNSDISFRYGQILICKVYLGKSCAVNNDKRL
AESLYPGHQSVYRTKKHLATSCPSKVKKSLSTSATPQEYCECTARKCVWY
LFDPDLVLPEYIVDFEYLSTVTPPMMSVFSELSKPTMSEEIRQQRFTEMC
TKKPEEDTTDNNVLNLEPIIASRPRLTFLTEEMILKQSGQTYLNKITELN
LHGCGLTKGKMLSSLSNIKKLVLSFNELTTMADLGGNSTLEYLDVSYNQI
TGMEGFKV
Run BLAST on NCBI

transcript from alignment at sc0000001:679224..692480-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000172 ID=TCONS_00000172|Name=TCONS_00000172|organism=Clytia hemisphaerica|type=transcript|length=13257bp|location=Sequence derived from alignment at sc0000001:679224..692480- (Clytia hemisphaerica)
GTTGATGATTACCATAATCTTCACCTTTTGTGACCTACCCCCTTGTAATT CCAGGCAATTTTAGGATCATACCCCTCTGGAATTCCGAATTTTTACAAAT TTTCAATCATTACCCCCTTGGAATTCCGCTTATTTTTGACGGATTTTCTA CCCTTATGAAATTCCACTGCATTTCAAACCTTACCCCCTTGGAACGGAAA TGGACCTCCTCAACAGGGGGTGTACGATTTTTTTTCTGGAAAAGCCCATT ATTGGTGTGATATTGAAATTTGTCACCTTTATCATTTTTCTAGAGATAAC AGTGGGAAACGGTTGATGGATTATCTGTTTCTGATACCAAAGGTGTCTGG AAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCATATCAATA CAGCTGATCACCAGGTGAGAGCGAGTTTATGTATTTTCGCTTTTGAGGAC GGTAAAGTGACTGAAGCGATTTGGAAAAATCCGCACTTCTGACCTGAAAA ATTGAGAACGGTAAAAAAGTGCTGATTTACCGTCGTCCTCAGTCTAAAGA TACTACTACAGTGGACTTTCACTAAGGCGAGACCAATTTAATTTGTTGTT CTACGAGCCCGACCGACCCTATTTTTGCTAAAATCAAAAAAATAATGATA TTAAATTTCAACTACAATATATTTTACACACTAGCTATTTGTAAGAATTA AATTTGAATAAAGCTGAAAATTAATTCAAGAAATTTAAAAATTCAGAAAA TCAAGCATTCCATATCCTAAAATTTTATTATTATGATCTTCATACCATAC CTGATGAATGAAAAATTTATTCTTATTTTACCGACCGACCCATATTTGTC TAACGATCTGCCCGTAGAACTCGAATCTTTTTTATAATTCGAACTAATTT TTAGTTCAAGTCATAGGGAAACTTTCGTAAAATACTCTCTACTATTCGAG TGTCTCTGTATTTGAAACAGAATGGGTTTCCCGCTCGAATTCGATATAGC GTGAGTTAACTGTATGCACTTCCAAGCATTATCGTGGCAGCAGATATCGT GTTTTTTTTTACCAACTAGACTAGATAGGGTAATTAGTGAGGGCTATTTT GAAGTGTTTTCAATGAAACGAGGGGTTATTAATCCAAAATCACCCGAGAA TACCATGTTATTCCGCGTTAATTGTATGGACTGACACTCTTATTTTGATT GGCTTAAAAATTTCGTACGATATTTTGTTAACCAATAAAAATATCGTACA ATACTTTTCTTTCAACCAATAGAAATTTTTGTTTACATCAGGGCGATTAC AAAAAAGCGGGGCTATTACGGATTTATCGCCCGCTCGTCCTTTACAAATC TAAGCTAAATGTAATCAACCATATAATTACTTAAGATATCCCGTGGAAGT GTGACCAACTTTCAAGTTGGCTAGTTCGCCATCACAGCTGGCACACAACG TTGTTTCAACGTTTATGTAACGTTCACAACGTCCATTTAACGTTAGATTA ACGTTGAAACAACGTTGTGTGCCAGCTGGGATATCACTGAATTCTTGGTT CATTCATAGTCATTATAAAAAACCCCGGCCTAGCAATTTATTTCTTTAGG TTTTTGTTCAATTTTCTTTTGTTACAAACAAAAGACAAGTTGTGATTTGC ATACTTTTTTATCACGTTACCAAAATCTCTTCTTGGGATTGGTCTATTTT CTAATCACATGATCAAAATGTTTGCAAAATAAATCGATTTTTGTCACGTA AGCTCCATCTTTTAACAATAAAAGGAGACAAAAGCCTTCCAGACCAGTGT TTTTATAATGACTATGGTTCATTCAAATCATTCGAATCCCGTAGAGGTCG TCATGCAGAACAAAAAACAGCAATACGGATTGCCATGCTATACATACAAG AAGTTGTTTGTTCATCTTATAATAGCCTGTACCACCCCGCCGCCACGGGC GTTTTCATATTTTGAAAAAAAACTTACCGTAGGTCGGTCTGTTACGATTA GCGAGATTCTTTGTCTCAGTTTGTCCCAAAATCCTAAAAAAACGTAGCGA GTAGGAGTGCTCTTTTGAAAATTGAAAGATACCATTACATTCGAAGTTGA GCTAGATTGAATGCTAAAAATAGCTACGTTCCATCGCATAGACCTTCCGA GTTTTTCGTAAAAAAGTCTGAGACACGGAAAATTGTCTAACCGTAACAAA CCGAACTTTGCGTTTCTTTTCAGTCAGCGAAAAAGTTTCTGGTACAGGCT GGTCTTACAAAAGCAATACAATGATCCTAATACTTGATCCTTCAAAAATG TTGACCATTCGTGTCGGTTCAATTTAGAAATTGTTCACTTAGCTTCAAAA TGATGTCCCTTAAAATGTTTCAAAACATTCTTCTTTTTCTTCATAGGAAT CATCAACATGTTCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTC GATAAACATCGAATCAAAACGACAACAACTCCGCCGAACAAAAACGATGT TAAAACAAATAGTGATATATCGTTTCGATATGGTAAGAAAAACTTAATTT TTTTTACATTTTCTTTTTGAAAAACAAACCCTGCTTCGACTGTCTTGAAA CTCGTAAGATATTTCACTCAAGGTCATGCAATATTACTAGCACTATGACA TGGAACATGGTATTAGGTACACCCTAAGAAAATAGTAACCTCCTGAATTT TAGGTAACCCAAATAATAGACGTTAGTAGGTACGTCGTATGTCGTTTGTA CACTCTTTGACCAAAGTAATTTTTTAGGTACCACTCCCTAAATATAGTTG AATTTTTTTATGTTGTATACGGAGAAAATAAAATATTATGTACTTGGGCT ACCTTATCGGCCAAAACTTAGTCGGCCTTAATTTTAGTCAGCCTTTATTA TTAGTCGGCCCTAATTTTAGTCACCAAGCCAAAATTTGGTCACTTAGGGC CGACTAAGTTTTGGCCGATAAGGTAGTTGCGAAGCCGAGTTGAATATACA TCACCGAGGGTTAATAAATCCAATAACCAACGAAAACCTACTTTAATATA TGTTTTATTATATACCTAGAGGCAAAAAAAAGCATAAATTATGCAAGTAG TCGAATGAGTCACATAAAACACTCTCATAATAGAACGTTCGAATGTTTTT CTTTTTTAACGATTTTCTTAATAACTTTGAGTCATAAAATTTGTTCATGA AATTGACAATAGATTTATTCTAATAAATTTATTTAATGAACAACAATAGC GACAAAAAAATCGAATTTTGAAAGCAAAATCAAAAAGAAAATTCTACCGT TGTATAATTGCCGTGGTATATCAGGAATTATTCAATGGCTGTTTTTGCCT ACATCTATATATTAATAGCGGTAGTCTGTATGTCGTTTTGTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTCGCGCCGTTTTATAAAGACTTTGTTTTGATTGATAG ATTAGACTTTTTCTTTTTTTTCTTTCTTTTCTTTTGTTTTATGTTTTCGA ATGTAAAGTAATTTTTAAACGACCTTATTTGATTTGAGACATTCGAATTC TTTTCAAAACAAAAGAAAATCTTTTAAAAAGAATCTGTTATGTTAAAGAA AAGAACAAATATAAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCCAATTTCCCACTGTAATTTTTTTGAGGCCAAAATCGGACTCACAGC TCTGACCCGTCAAGTATTCATCAGATTTAAAAAAATACGCAGACGGGTTC CTGTCTACGTAAAAAGGGACCTTTAAACATGTATGTCGATAATTATTCTG CTGTAAATCATTGTTGAATTTGAAAAATTACTGAAGTTATGACGAAGCTA TTTTATAAAAAACAACATAAAATTGCGCTATCACGCTTTTTTGTCTGCGT GTCCTAGCTGCCTTCCGGGGGGACTATGGTTGCGAGCTGACTTTCGGCCC TGCCCCTCGGACCCTTAGCAGAATAAAGAGGAGAAGAAACAAGGGAAATT GTGTGAATTTTAATTCACTTTTTGGAACTAATTTGACCATATTTCTATCT TTCTGGGGGCAAAAAGTTGAAATTTTCCTATTTTTCCAATTATTAGTGGG ACTGAAGTTTGATTTTCCGACTTTTCAAACTGCCATGTTTCAAAAAAGGC ACCTTTAAGGCCGGCACATACCCTTCTCTTGCCTAAGTACCCCCTCCCCC GGGCTGCCTCTTTTCGAAGAATCGCGTGTCATGTCTATTATTTCACTCCG CTTATCTTGACATCAAAGTTTTCCTAAGCATCAAGAACTACGGCAAATAT AACGAGCGAAGCGAGAAAAAAATCCAATTGCAGAGCCGTCTCGGACGTCG CTGGTCGCCGGTATGGTGTAATTTGGGAATGACGCCCTTTCTGTATTCTG ATTATTTTTGCCACAAAAATCTTTTTCAAAATATGGTTAAAAGATACGTC ACCCGGGAGGGATAGAGTCAAACTTTGAAGAGAATTCTTCCCAACATCTC AAAGGACTTTAAATGCGTTCAGTAAACAGCTAAACCGGCGTGCGACGCCG GGTACCGGCTAGTATGTATATAATAATATGACTAAAATGATCTTCATCTT CATTTTTCATTGATCTTTTAAACAATTTTTTTTACATTTAGGTCAAATCT TGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAATAATGATAAA AGGTGAAAATTCAACATTTTTAAACATTGGGCTGTTCCATTTAAAATCAA TACAGGGGGTTGAACGAACTTTTCTCAGCCAAAAACAATTCTCGAAAATG TCGGGATAACCACCTAGAAAATAGAAGAATTTGCAAAAAGACTTTTGGAT AATCTTTTTATACTTTCAAAAGAGGGCGGAAGAACTAAAAATCTGTTTTT ATCTCCCTGAAATCTTACAGAATAACATTTTACCCTCTGGAAAAATAAAA AAAACTTAAACCCCGTCTAATCGTCTTTGGATTTCCCCCTGGAATGGAGA TAAAAAGTAGAATGGCCCTTTTCCCAGTGAGTCAAAAATTCTAGAAATAT TCGCTTTTTATATGAGAATAATTTTGTAAGAGCCATAGGCATAATTTTGG CCAAAACCTAAGAAGATAAAGTACTTTTAAAGGTTTTATTTTTAAATAAG AGTGATATAGTTTACTAATCATCAATTTTAAATTTACAAGCCTTTTCACA TTGAATCGACACGGATGTGGAGCAAGATTGGTCAGAAAGAGGAAAAAACA AATATTTTTTTTGTTTATTTAGTACAGGGCTTTTCCAGAAAAAAATTAAC CCCACTGTTGAGGATATTGATTTTTCGAAGTATCGAACCCCCTGAATATC CTACTTTATTAGTAAAGACCCCCTGGATATCCACTTTTAAAAATATGCTC AACCCCCTGGATATCCTCTCTTATAAAGATGCTTACCCCTGAATATCATA TTTTTTTACTTGGAAAGACACTTTACCCCTGGATATCCACTTTTGAATAA AAATCGTTAACCCCCTGGATATCTGATATCCTCAACAGGGAGGCACGGAC CAATATAACATTAAGGAGACACTACCCTGATTTGAAACATGTATCTGATA TGAAACAGGGACACTTATGTAAGAATAAAACCTTTAAGCCTTAGAATCAT GGAAAAATAAGAACCTCAAACTAAGAGGAATTCATTATATTGAATAACTA GGTTCAAACCCATGCAACAAAAAGAAACTTCTGCGTTATTTCGCATTAAA AGAGTTATTTTCCACTAGGATAGTATTACATTCCTTCCCTTACACGTAAA ATAATACTCCGTAGCAGAGGGTAACTCACGTCTAACGTAGCAATGAACTT AGCTTATTACACGAATATTACTAGGCAAGTATTCAACGGCCTTGAATTTA ACACTCTAAAAATTAACATGAATTTTATTGCTTTTTCAAGGACACCATGG CTGGTTTTAATTAAGGGGGTTTTTATTAACACGAAATTTTTCTATTCGTG TTAATAAAATGAGTAGTAATATTCGTGTAATAACTAATACAGTATATGGC CCCCAAAACGGAGNAGGGAAAAGAGTGGCGCTCTCCCCTACCTTCGGGTA GACAGCTATAAAAAAAGGGAGCCCGGGGGGGGGGGTACTTAGGCAAATGG ATGGTACGGTATGTGCCGCCCTTAAGGGTACCTTTTTTGGACTTCCAAAG TCTTGCTAAGGGTCGGAAAAAATCAGAAAATCAAATTTCAGTCCCACTAA GGGACTTTCAACTTTTTACCCCCTGAAAGATCGAAATTTGGTCAAAATTG GTCAAATTAGTCCCGCCAAGGGTCATAAAATTCACAAAACTTTCCTTGGT TTTCTCTTTTTTTAGTCCCGGTAAGGGTCCAAAGTTCGAAAGTCGGGCGG CACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCGCCCC CCCCCCCCCCGTCAGCTCGCAACGCTAGTACCCCCTCCCCCGGGTAAGGG AGTCTGATTCACAGATCTGTAGATATAATTTCCTATACAGCAGTAGAGGC TCTTTAACACGAACCTCAATTAATCGAATATCCCCTTAACTCGAACAAGT TTTCAAGTCCATTCAGTGCCTTTAAAGTCTTGCTCCATATCTCGAAATTT CCTGTACAGTACAGTCTCTTTAGCTCGAACCTCTATAACTTTTTCTAGTC CTTTGACTATGTTCAGACATTACGGTTCCGTTCCGAAACGGTTCCGAAAC AAGTGGGAACGTCAAAATTCGAAACGTCAAAAAAGAAGACGTTACAAAGC AAAACAGATCGAAACGGTTTCGCTCCNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTGCTCCGTTTTCTTGCTCCGAAACGTTCCGAAACCAATATGAAC ACACTCGATCCGTAACGAAAATCATACCGGAGCGAAACGGAACAGTAACA TGTGAACATGATCTTAGTTAACAATATTTTGTTTTAAGTTACGTAATTTC CACCATTATGGAAGCAAACATTCGATTTGTGATTTAAGTGTTCGCCTCCA CAGATTCGAACGATTGCTTCCATAATGGTGGAAATTACGTAACTTTAAAA AATATGAAAAGTCTCTATACGTAAAAAGTACCGTCAAAATTTTTTTTTCC GGTTTTAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATATC GTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAATCA CTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGCAA ATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATATTG TCGACTTTGAATATCTTTCAACGGTAAGTTTTAATGCGGTAAAAGTTTCA ATAGAAATATCTCAGATTTGAGTTTGGATAAGTGAGACATCGTTTAATAT TTTGAGCCTATTGCGAGTGGGGGGCAGGGGTCATGAGGGTAGAGGAGACA GGGTAATAAAACTTTCCCAGGGCCCGCGCCATGAAATTGAAAGTGGGGGG GGGGCAATAAATATAGAGTCTAAGGAGGCGCAACCAAAAATCTTTACTTT GCAAAAAAGTGGGGCCTCCCCCCACCTCCGCTTTGGACATTCAGGATAAT TTTATCAGGGTTATATATTTACTATCTGAAAAACGTCAATAAAAAAACGT CAAACAAATTCCTCTTCTCTTCTTCATCAACAACAGGTCACTCCACCAAT GATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGTCAGAAGAGATTC GACAACAAAGATTTACTGAAATGTGCACAAAGAAACCAGAAGAGGACACG ACAGATAACAATGTCTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAG GTAGGGTTTGAATATTTTGTTGGAAAACACGTTTTTTTGTAAGAACAAAG TATATAGGATCATAAGGCTTTGATGGTCATAATATTAAGAACAAGTATTG GTTAGAAGAACCAGAAAGGTTGCATAAGTTCGATTGCCATGGCAATGGTG TAGTCACATGAACGGATTTTGAATTCCTCCCAAAAGCAGTTCTTTCTTTG CTGGACAGCTTTTTTTAGAATCGTGGATATTCTTAACTTTTTTGGGGAAA ATCCTCCTGAAATATTCTTACGGTATTCTTAGGATTCTTAGGATCCAAAG TTAACCTAAATCTAATATGCAAAAAATTCGACATTTTTATGAAATTTATA AGCCTTGAATGACAATTTACAGGTAAAATGCTCTGAAAATGGAACTGTTA GGTTCAGTTGCATCAATTCCATGTTGATGTTATTCTTAGGATATTCTTAT TTTTTGGCAAATTTCATCATGAATATTCTTATATAAAAGTATATCCTTGT AAAGAAAAAAAGTGTGTATCTGTTCCAGAAACTTTAGGCTGTTGGTATTC TCTAACGTATGCTTGTGATCCAGCCTGCATTCATTTACTTTATGACATTT GGTTTTTCTCTCCGGGTCTATTGACTACTGGATTTATGAACCGCCTACTT TACTTATTATCCATAAAATGTAAATGATCTAGAAAATTTTCAATACTTTG AACTCTATTCACCAATAACCGTATTACTTCGAATAAACACCCCCTTCTTT TAAAGGCCCTCTTGAATAAGCGCCCCTCCTGAAATCCAAAAAAAATAATA AACGCCCAGGGCGGTATATTAACCTCATAGAGTGCAATATGATTTGATAG AGCAGTATTATAATGAGAGTTGGACTGAATTCTTATTTTTCATACTCGGA ATTTCAAGTTTATTTAGATAGAAATTTGTGTAATCTGATAGAACACTTGT ATTATTATAAGCTTGAGAATGGTGATACCACCGAAATATATTGCTTGACT GTTTTTAAATTTTAAACTTTGAAAAATGGCTTCAAATTTATTAACATAAA TTTATTAACATTTTTATACTATATTTATATAAATTGTTTTTTGTTTTTTT TTGTTTTGTTTTTTCAGGTTGACCTTCTTGACGGAAGAAATGATACTGAA ACAGTCTGGGCAAACCTACTTGAACAAAATCACGGTTGGTGAAACTTATT ATGATAAGAAACAAATAATCTTCATTTCAAGTTTTTTGGCAGACCCCTGA AATCTTTAAGAAGAGGGAGGGGAATTCAAATTATATTTTTCAATTAACCA ACAACGAGCAATTATTTTATTTTTTGACGATATATTTCGATCTATTGATC ATCTTCAGGTCTAAAATTCAATAAAAACAAGATTANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT TTAGCGTACCGTCGTAGAGCAAGTTTGCGCAAACTTCAATGGCTTCGTCG ACTGGAACATTCGTATATAATGAGACAACATCAAAACTGACCATCTCTTT GTCATCTTGCAGGACAATATCAGCTAACTGGTCAGCAATTTCTTTTGTAG ATGAGTTGATTTTGCATTCTGGAACAGCAGATAACCAGTTTTCAAATTTC AAATTATGCAGTGCTATTTTGTGTCAGACAGATTTACACCTTATCGAACA TTCACAAAGACATTTCAGTGCCGTAGGAAGCATTTTCATATTGGGGGGGG AGGGCTGAAGTTTAGTGACACCATAGTTTGGCCCGAGGGGGGAAATTTTG AAAATTTGAGCTCTAGATTGCTTAAAAATACACTCAAAACATACACATAA AGGCAATTATGACACATTAAAAAAGCAAAACTTTGCATTCTGCAAAATAA CCATTTTTGAAAAAATTATTGGGGGGGGGGCATAGCCCCCCTCTGCCCCC CAGTTGCTACGGCACTGCATTTACGTCTCAAAATTCAGCAAAATTAGTTG TCCGTTTGGAAAGTCCCATAATTTCGCATTGATCACTGGAGCTTAGCCTG TACCATGCAGTCACTAGCCTATCTCTATCTCAACACGCGTTTTTTTTATT ACTCTCATCACAGCCTTTTCCCGATAATTTTTCAATTAATCTAAATAAGT TTGCGTTTATCGAACCAGTGATATTGGAAGTTTATGGTGGCTTGGATCAC GTTTGGCTACGTTTTGAGAGATTCCTCTCCCATCATTGGGCAATGTGGAG GATGTTTTCCCCACTATTTGTACTAATAGACCTTCTGATTACCCATAATT ATCAAGTGTAATTTCCTTCCAAGGTGTGAACCTTGTTATCATAGGTGATG AATGACGTGAGTGAAGGTAGAGAGTCTATAACCATATTTCCCTAACACCC TGCCTGGAGCAGAGCAGAGCTTGGGATTCAAACATAGTCCATTGCGTTGA AAGTCTGTGATCGAAACCTTCACACTACCAATCGGCTAAATCGGATAAAT CAGGTGTTCGATTTAGGAATAGATTAACTGAAATCACGAGCTTACCTCAA ATCTCTACCTACAAGGAATTGTTCTTTTGTAGGAGTTAAATCTACACGGT TGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAAGAA GCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTGGAA ATGTAAGTTCGAGTGTTTATAATGCCCCCGATTTCATTTCAATTTTTTTT TCCTTAATCATATATTTCTATTACAAAATGAAAAATTCAGAGTTTCATCA GATTTATCATCTTTTTACATCTGACGATTGCTGAGAGCATGAAACTCTGG GTAATGTAAAATTTTCAATTTGTCACAGAAATATATGATTTCAATGAAAG CTCTATCTTTGATATCGAGCACTTTTTGGTGTTGATTTCTTTACCAAACA AATAATGAAATCCTTTTTGTTCTACAAAAGCCTTGTAGCAAATTCATTCT CTGTAGAAAACTCATTTGAAAGTGTCGATTCAACTGTGATTCACTTGGTA AGTGAATATACCTTCGCCCGGGTCAATCTGGGTACACCGACACTCTGATA CACGAGTATCAGTTGTGTTGAAGTTTTTATAAGATGCTCACATAATTGGT TATTCAAAATAATAGAGATGACGCGTTCTTTAGAAAAATATAATAAAAGT TTTTGTTTGAATAGTTAACGACCAATCCAATGACAAAAATTCTTGTAAAA TGTTCAGCTTGACCCACGAGTATGGGGAGATACACCTAGTACTGTGTGGT TTTTGTAAGATTCGACCATACGAAGATGCTCCGTCATCCTGAGTCGTTCG TGTATAGTTACTGTACACCAAGAGCTCTGTATGTCGGATGCACGTGTTGG CAAAGTCAGGTAATTTCCCGCAGTGATTTCCATATCCTAAGAAAGAGAAT GCTGTTCTGGATAGGGCATCTTTCGTTTATCGGTAGGATAATCTCTCTAT CTATGTTATAATAATTCTTTCTCTCCCTCCTTTTTTTCCCAGTCCACTTT GGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAGGATTCA AAGTAAG

Coding sequence (CDS) from alignment at sc0000001:679224..692480-

>TCONS_00000172 ID=TCONS_00000172|Name=TCONS_00000172|organism=Clytia hemisphaerica|type=CDS|length=7392bp|location=Sequence derived from alignment at sc0000001:679224..692480- (Clytia hemisphaerica)
TCCACTTTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGA
AGGATTCAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGA
AAATGTTATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAAC
GAACTGACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGG
AAGAAATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACG
GTCACTCCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAAT
GTCAGAAGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAAC
CAGAAGAGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATC
GCTTCAAGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGT
ATATCGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGA
AATCACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCT
CGCAAATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATA
TATTGTCGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGT
GTACCTTGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAAC
ATGTTCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAAC
ATCGAATCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACA
AATAGTGATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAA
AGGTGTCTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTC
CATATCAATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAG
TTACAATCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTAC
ACGGTTGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATC
AAGAAGCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGG
TGGAAATGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGG
CAAACCTACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTT
TTCAGAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGAT
TTACTGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAAT
GTCTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAG
CCTTTATCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTA
CAAGTTGTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCT
CAAGAATATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGA
TCCTGATTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAA
CGGTCAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAA
ATAATGATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGA
ATAATTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCG
CCGAACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGA
TGGATTATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCAT
TTCAAAATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAGTC
CACTTTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAG
GATTCAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAA
ATGTTATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGA
ACTGACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGGAA
GAAATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACGGT
CACTCCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGT
CAGAAGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAACCA
GAAGAGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATCGC
TTCAAGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTAT
ATCGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAA
TCACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCG
CAAATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATA
TTGTCGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGTGT
ACCTTGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAACAT
GTTCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAACAT
CGAATCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACAAA
TAGTGATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAAAG
GTGTCTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCA
TATCAATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAGTT
ACAATCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTACAC
GGTTGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAA
GAAGCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTG
GAAATGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGGCA
AACCTACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTTTT
CAGAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGATTT
ACTGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAATGT
CTTGAATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAGCC
TTTATCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTACA
AGTTGTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCTCA
AGAATATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGATC
CTGATTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAACG
GTCAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAAT
AATGATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGAAT
AATTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCGCC
GAACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGATG
GATTATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCATTT
CAAAATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAGTCCA
CTTTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAGGA
TTCAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAAAT
GTTATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGAAC
TGACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGGAAGA
AATGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACGGTCA
CTCCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGTCA
GAAGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAACCAGA
AGAGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATCGCTT
CAAGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATAT
CGTACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAATC
ACTATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGCA
AATGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATATT
GTCGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGTGTAC
CTTGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAACATGT
TCGTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAACATCG
AATCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACAAATA
GTGATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAAAGGT
GTCTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCATA
TCAATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAGTTAC
AATCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTACACGG
TTGTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAAGA
AGCTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTGGA
AATGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGGCAAA
CCTACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTTTTCA
GAACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGATTTAC
TGAAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAATGTCT
TGAATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAGCCTT
TATCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTACAAG
TTGTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCTCAAG
AATATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGATCCT
GATTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAACGGT
CAAATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAATAA
TGATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGAATAA
TTTTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCGCCGA
ACAAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGATGGA
TTATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCATTTCA
AAATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAGTCCACT
TTGGAGTACTTGGATGTCAGTTACAATCAAATTACTGGTATGGAAGGATT
CAAAGTAGAGTTAAATCTACACGGTTGTGGGTTAACTAAAGGGAAAATGT
TATCTTCGCTAAGCAATATCAAGAAGCTTGTCCTGTCCTTCAACGAACTG
ACCACTATGGCTGATCTCGGTGGAAATGTTGACCTTCTTGACGGAAGAAA
TGATACTGAAACAGTCTGGGCAAACCTACTTGAACAAAATCACGGTCACT
CCACCAATGATGTCGGTGTTTTCAGAACTATCGAAACCTACAATGTCAGA
AGAGATTCGACAACAAAGATTTACTGAAATGTGCACAAAGAAACCAGAAG
AGGACACGACAGATAACAATGTCTTGAATTTGGAACCGATCATCGCTTCA
AGGCCAAGATTGGCAGAGAGCCTTTATCCAGGACATCAATCAGTATATCG
TACCAAGAAACATTTAGCTACAAGTTGTCCTTCAAAAGTCAAGAAATCAC
TATCTACTTCGGCTACCCCTCAAGAATATTGTGAGTGTACTGCTCGCAAA
TGTGTTTGGTATTTGTTCGATCCTGATTTGGTATTACCGGAATATATTGT
CGACTTTGAATATCTTTCAACGGTCAAATCTTGATATGCAAAGTGTACCT
TGGAAAATCATGTGCCGTAAATAATGATAAAAGGAATCATCAACATGTTC
GTCAGTAATTCAAGTGACGAATAATTTTCGTTTCCTCGATAAACATCGAA
TCAAAACGACAACAACTCCGCCGAACAAAAACGATGTTAAAACAAATAGT
GATATATCGTTTCGATATGATGGATTATCTGTTTCTGATACCAAAGGTGT
CTGGAAATATCGTTGACCATTTCAAAATTATTGAAGATGGTTTCCATATC
AATACAGCTGATCACCAGTCCACTTTGGAGTACTTGGATGTCAGTTACAA
TCAAATTACTGGTATGGAAGGATTCAAAGTAGAGTTAAATCTACACGGTT
GTGGGTTAACTAAAGGGAAAATGTTATCTTCGCTAAGCAATATCAAGAAG
CTTGTCCTGTCCTTCAACGAACTGACCACTATGGCTGATCTCGGTGGAAA
TGTTGACCTTCTTGACGGAAGAAATGATACTGAAACAGTCTGGGCAAACC
TACTTGAACAAAATCACGGTCACTCCACCAATGATGTCGGTGTTTTCAGA
ACTATCGAAACCTACAATGTCAGAAGAGATTCGACAACAAAGATTTACTG
AAATGTGCACAAAGAAACCAGAAGAGGACACGACAGATAACAATGTCTTG
AATTTGGAACCGATCATCGCTTCAAGGCCAAGATTGGCAGAGAGCCTTTA
TCCAGGACATCAATCAGTATATCGTACCAAGAAACATTTAGCTACAAGTT
GTCCTTCAAAAGTCAAGAAATCACTATCTACTTCGGCTACCCCTCAAGAA
TATTGTGAGTGTACTGCTCGCAAATGTGTTTGGTATTTGTTCGATCCTGA
TTTGGTATTACCGGAATATATTGTCGACTTTGAATATCTTTCAACGGTCA
AATCTTGATATGCAAAGTGTACCTTGGAAAATCATGTGCCGTAAATAATG
ATAAAAGGAATCATCAACATGTTCGTCAGTAATTCAAGTGACGAATAATT
TTCGTTTCCTCGATAAACATCGAATCAAAACGACAACAACTCCGCCGAAC
AAAAACGATGTTAAAACAAATAGTGATATATCGTTTCGATATGATGGATT
ATCTGTTTCTGATACCAAAGGTGTCTGGAAATATCGTTGACCATTTCAAA
ATTATTGAAGATGGTTTCCATATCAATACAGCTGATCACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000100XLOC_000100Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000172-exon-sc0000001-1575043694:692067..692480TCONS_00000172-exon-sc0000001-1575043694:692067..692480Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:689949..690084TCONS_00000172-exon-sc0000001-1575043694:689949..690084Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:687279..687339TCONS_00000172-exon-sc0000001-1575043694:687279..687339Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:684458..684671TCONS_00000172-exon-sc0000001-1575043694:684458..684671Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:683931..684094TCONS_00000172-exon-sc0000001-1575043694:683931..684094Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:682747..682813TCONS_00000172-exon-sc0000001-1575043694:682747..682813Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:680129..680248TCONS_00000172-exon-sc0000001-1575043694:680129..680248Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1575043694:679224..679288TCONS_00000172-exon-sc0000001-1575043694:679224..679288Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:692067..692480TCONS_00000172-exon-sc0000001-1510915933:692067..692480Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:689949..690084TCONS_00000172-exon-sc0000001-1510915933:689949..690084Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:687279..687339TCONS_00000172-exon-sc0000001-1510915933:687279..687339Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:684458..684671TCONS_00000172-exon-sc0000001-1510915933:684458..684671Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:683931..684094TCONS_00000172-exon-sc0000001-1510915933:683931..684094Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:682747..682813TCONS_00000172-exon-sc0000001-1510915933:682747..682813Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:680129..680248TCONS_00000172-exon-sc0000001-1510915933:680129..680248Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1510915933:679224..679288TCONS_00000172-exon-sc0000001-1510915933:679224..679288Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:692067..692480TCONS_00000172-exon-sc0000001-1491911889:692067..692480Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:689949..690084TCONS_00000172-exon-sc0000001-1491911889:689949..690084Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:687279..687339TCONS_00000172-exon-sc0000001-1491911889:687279..687339Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:684458..684671TCONS_00000172-exon-sc0000001-1491911889:684458..684671Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:683931..684094TCONS_00000172-exon-sc0000001-1491911889:683931..684094Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:682747..682813TCONS_00000172-exon-sc0000001-1491911889:682747..682813Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:680129..680248TCONS_00000172-exon-sc0000001-1491911889:680129..680248Clytia hemisphaericaexon
TCONS_00000172-exon-sc0000001-1491911889:679224..679288TCONS_00000172-exon-sc0000001-1491911889:679224..679288Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000172-proteinTCONS_00000172-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:679224..692480 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.90875 7.15356 5.03247 4.13549 14.6021 10.9849 18.8197 19.6734 10.9079 12.8275 9.47835 10.0868 3.11567 3.27557 2.28216 3.15279 3.71357 4.4157 2.43616 3.30739 4.09861 3.34711 4.85321 5.03215 22.5329 21.6248 5.24376 3.11622 4.1278 3.11892
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
BLAST of TCONS_00000172 vs. Swiss-Prot (Human)
Match: LRRC9 (Leucine-rich repeat-containing protein 9 OS=Homo sapiens GN=LRRC9 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.082e-39
Identity = 101/315 (32.06%), Postives = 169/315 (53.65%), Query Frame = 1
Query:  301 SGKRLMDYLFLI--PKVSGNIVDHFKIIEDGFHINTADHQESSTCSSVIQVTNNFRFLDKHRIKTTTTPPNKNDVKTNSDISFRYGQILICKVYLGKSCAVNNDKRLAESLYPGHQSVYRTKKHLATSCPSKVKKSLSTSATPQEYCECTARKCVWYLFDPDLVLPEYIVDFEYLSTV-TPPMMSVFSELSKPTMSEEIRQQRFTEMCTKKPEEDTTDNNVLNLEPIIASRPRLTFLTEEMILKQSGQTYLNKITELNLHGCGLTKGKMLSSLSNIKKLVLSFNELTTMADLGGNSTLEYLDVSYNQITGMEGFK 1236
            S +R+++ LF +  P+VS       +I+E GF    ++  +       I V+N+    +  RI+            +     FR+G +LI KV+LG+S   +  + +++S YP   SV+  +K+L  S               Q  C+C+ R+C W++FD DLVLPEY+V+FEY++ V  P + SVF+ +    + EE ++     + +K   +   D+ V+ +EP I +RP+L  L ++ IL  +  +  + I  LNLHG  L+K + LS L+ ++KL +SFNE T + D+     LEYLD S+N +  +EGF+
Sbjct:  464 SYRRMLECLFYVFDPEVSVKKKHLLQILEKGF--KDSETSKLPLKKEAIIVSNSLSISECPRIEFLQQKHKDEKKISLKHELFRHGILLITKVFLGQSVQAHEKESISQSNYPMVNSVFIPRKYLLNS------------VMGQRNCDCSVRQCKWFVFDHDLVLPEYVVEFEYITMVKAPSLFSVFNNV----ILEESKKNPEVSVFSK---DLKFDDEVIKMEPRIKARPKLISLDDKTILSLAKTSVYSHIVSLNLHGNSLSKLRDLSKLTGLRKLNISFNEFTCLDDVYHLYNLEYLDASHNHVITLEGFR 757          
The following BLAST results are available for this feature:
BLAST of TCONS_00000172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRRC92.082e-3932.06Leucine-rich repeat-containing protein 9 OS=Homo s... [more]
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