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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000112 ID=TCONS_00000112|Name=TCONS_00000112|organism=Clytia hemisphaerica|type=transcript|length=993bp
CCTCAGGATACTTGTCGAGATAGTCAATATCATGCAGACCAAAATTGAAC
AATATTACATCATATTGTGTAGGGCGTAAACTTATTGTGGATAAAAAATA
ATCCAAACATTGACGCCCATAGCTTGAATCCATCGCCGCCCCTGCTTTTG
AAGAGGGCGCCAATTGAACTTGACAACTCCCATTAAGGGCGGCTGCAGCT
GAGTAGCTTTACCCTAAAGCAATTGAATCTCCAATCACAAGACAGTTAGG
TTTCCCTTCAAAATACGTTTTCATAACACCTGGTTTACACACTCGTGAAG
CTTTTATATCACCATCAGGTACAACATTTTGTTGGTTAGTGGAAACCAGC
CCTAATGACTGTTGCTCTTCATGCTTGATCTCTTGGCGATGTTGCGTCTT
GTTTGTAGCCGGTTTGGTCGGCGTCATAGGGCCAGCGGCACTGTTTGATA
ATAGAGAGACCTTGTCATCTGGAGATTTCTCTGAAGCATCTAATTTATCA
ATCAAGTTTTGAATGCTTTTGTctggttttgttttcaaatgttGGTCCTG
TTTTTTGGCCGGTGAGTCGGTCTTCACCTTCTGCTTTGTATTGAACTTAT
TTGCCTCGATTGCtttgcttttgatttttttgtcaacCGTTGGCGATACA
TTTTGCTCTTTCTTTCTCTCAATTGccttatttttgatttttttgctgcT
CGACGAGTCATTTGACTTTGTTTTTGTCTCGATTGCTTTGTTTTCAATCT
TTTTATCAGCAACGGGTGACAACTTTTGTTGCTTCTTTAACTCGCTAGCC
TTGATGTCAACTTTTTTTGTCTCTGTTGTAAAAGTAGgttttttatctgt
tttactACTTTTTGTTACTGCTGGTTTCAGTTTTTCAGTTGTTATTACAG
AAGGATGAGGGATTGGTTGCTGTGAAGTAGCTGTTGTATGTTTCTTCTTG
GCCGTGTTGTGTTCTGGCATCACTTTCTTCTTCTGTATTTTGG Run BLAST on NCBI transcript from alignment at sc0000001:2134555..2135889+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000112 ID=TCONS_00000112|Name=TCONS_00000112|organism=Clytia hemisphaerica|type=transcript|length=1335bp|location=Sequence derived from alignment at sc0000001:2134555..2135889+ (Clytia hemisphaerica)
CCTCAGGATACTTGTCGAGATAGTCAATATCATGCAGACCAAAATTGAAC
AATATTACATCATATTGTGTAGGGCGTAAACTTATTGTGGATAAAAAATA
ATCCAAACATTGACGCCCATAGCTTGAATCCATCGCCGCCCCTGCTTTTG
AAGAGGGCGCCAATTGAACTTGACAACTCCCATTAAGGGCGGCTGCAGCT
GAGTAGCTATACCTGGAATAGAGATAATGATGAAGTTGATTAGccataat
aaaagtttttcttaTATTTGCATACTACTCCACTCTATTTAAATACGACC
GTATATGCGGCCTAAAATTAGGCCTTCGAAATTGGACCCTTATAATGTAG
AGAAAATGTAACcaaattttagtaaatttgggacgaAAAATCGACCCCTA
CGCTATAATTTCATGAAAACCTTTGACCGttaaaaggccaaaaaattgtc
agaatttccaaaatttaagcCGAAGACCTATTTTCCGAAAAAGTTTCTCT
TTAGAAATACGGAAGGGCAACATATTGAATTGCAATGGACAATTGACAAC
TTACCCTAAAGCAATTGAATCTCCAATCACAAGACAGTTAGGTTTCCCTT
CAAAATACGTTTTCATAACACCTGGTTTACACACTCGTGAAGCTTTTATA
TCACCATCAGGTACAACATTTTGTTGGTTAGTGGAAACCAGCCCTAATGA
CTGTTGCTCTTCATGCTTGATCTCTTGGCGATGTTGCGTCTTGTTTGTAG
CCGGTTTGGTCGGCGTCATAGGGCCAGCGGCACTGTTTGATAATAGAGAG
ACCTTGTCATCTGGAGATTTCTCTGAAGCATCTAATTTATCAATCAAGTT
TTGAATGCTTTTGTctggttttgttttcaaatgttGGTCCTGTTTTTTGG
CCGGTGAGTCGGTCTTCACCTTCTGCTTTGTATTGAACTTATTTGCCTCG
ATTGCtttgcttttgatttttttgtcaacCGTTGGCGATACATTTTGCTC
TTTCTTTCTCTCAATTGccttatttttgatttttttgctgcTCGACGAGT
CATTTGACTTTGTTTTTGTCTCGATTGCTTTGTTTTCAATCTTTTTATCA
GCAACGGGTGACAACTTTTGTTGCTTCTTTAACTCGCTAGCCTTGATGTC
AACTTTTTTTGTCTCTGTTGTAAAAGTAGgttttttatctgttttactAC
TTTTTGTTACTGCTGGTTTCAGTTTTTCAGTTGTTATTACAGAAGGATGA
GGGATTGGTTGCTGTGAAGTAGCTGTTGTATGTTTCTTCTTGGCCGTGTT
GTGTTCTGGCATCACTTTCTTCTTCTGTATTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000112-exon-sc0000001-1491911889:2134555..2134762 | TCONS_00000112-exon-sc0000001-1491911889:2134555..2134762 | Clytia hemisphaerica | exon |
| TCONS_00000112-exon-sc0000001-1510915933:2134555..2134762 | TCONS_00000112-exon-sc0000001-1510915933:2134555..2134762 | Clytia hemisphaerica | exon |
| TCONS_00000112-exon-sc0000001-1575043694:2134555..2134762 | TCONS_00000112-exon-sc0000001-1575043694:2134555..2134762 | Clytia hemisphaerica | exon |
| TCONS_00000112-exon-sc0000001-1491911889:2135105..2135889 | TCONS_00000112-exon-sc0000001-1491911889:2135105..2135889 | Clytia hemisphaerica | exon |
| TCONS_00000112-exon-sc0000001-1510915933:2135105..2135889 | TCONS_00000112-exon-sc0000001-1510915933:2135105..2135889 | Clytia hemisphaerica | exon |
| TCONS_00000112-exon-sc0000001-1575043694:2135105..2135889 | TCONS_00000112-exon-sc0000001-1575043694:2135105..2135889 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:2134555..2135889 + |
Blast
The following BLAST results are available for this feature:
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