TCONS_00000090 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00000090
Unique Name	TCONS_00000090
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2107

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000001:1826493..1838565+
coding sequence from alignment at sc0000001:1826493..1838565+

transcript sequence

>TCONS_00000090 ID=TCONS_00000090|Name=TCONS_00000090|organism=Clytia hemisphaerica|type=transcript|length=2107bp
ttcagtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAG
CATGTCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGA
CAAAGACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCA
ACGTCTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATT
ATGCACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAAC
AAAGATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTC
AATTTTCAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTG
CAATGGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGA
TGGTGTTGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGC
TCCAATACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAA
ATTGCTGGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACAT
TTTGAGGACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCT
TCAGAAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCA
CTTATTCAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAAC
GTGGGGAGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAAC
TATCCCACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAA
GTGAAATCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATT
CTGGcGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAA
AGATTCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCT
GTTGCATGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAA
ACCaGCTTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGG
GTCATGAGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAA
CTTATGGTTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATG
ATTATTTAAATATGTTAGCACTGGTACAAAtatattgaatttgaatgacg
aataaaaaagaagttttttacacaaaattaGGACTATAAATTATATTTTA
TACCAGGcaattttaatttattgaagtttttttgggtcaagctggagttt
ttacaagttctttgatgactctgttggtcgttaagtgttgagacaaacga
ttttattactttttctaaagaacgcgtcatccctattgtttaaaaataac
caatcagttaagcatcttgtaaaaactccagctcatcccgttTTTTTAGA
TTAATTAAATTTATCCTTGAAGCAATCAGACCTATATTATTATTCTTTTT
ATATCTTACCTCCCCTCCTCAATCTTTGTTCAGTTCACAAACTGTGAACA
TTTCTCTACTACATACCGTATTTAGTTTatccatagtcattataaaaacc
ctggtctggcaatgtattgttttagctttttgtttttgatcacgttacca
aaatctcctcttgggattggtctattttccaaTCAGATGATCAAAAGGtc
tgcaaaataaatcgattttggtacgtaagctctatcttttaacaataaaa
agagacaaaaggtttccagaccagtgtttttataatgactatggtttaTC
ACTGCTTTTGTAAAACCTATTCCACATAGAAATAAATACCCAAAAAATAG
CTAATTTCTTTTGCATATtattcagaaaaatattttattttctatttgcA
ATTATAAACTCATTATCATattaaagtaaaagaaaataattacaATGATT
CATGTTCAATCACCTGTGTCCAATtattttgagactgaaattcaaGCTTT
TCTGgccttgaaatatttcatgcaAATATATGTGAAAATTTGTTACTTTA
AGTAAATCTCTGTTAAGTAAATCTCATTAGCTAGATAACCGTTGGTGcta
gaaaatt

Run BLAST on NCBI

protein sequence of TCONS_00000090-protein

>TCONS_00000090-protein ID=TCONS_00000090-protein|Name=TCONS_00000090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
QCICTMMTLIREVAKEHVIQYVLVMLDDLLLVDKDRVKIIHQTAAKHNFN
VWPPLKNLLNRDDQIIMHVASRLLAKLSTFSKTKMPDSDLVFYLTWLKGQ
FSVPSNDYLQSAAECLQWVLRVDEYRLPFVNADGVDSLVSVLLSNLGFQL
QYQFIFCIWMLSFNVEIAGRIGENNVIPVMADILRTSQKEKVTRIIIATF
RNLLEKPEQSKNACVALIQSKLLPVFNVLINKTWGDEDIKEDLEFISEKL
SHSVQDLSTWDEYVAEVKSGRLEWSPVHREEKFWRENAIKICEKNYELLK
ILVKLLQFNTDPIIQAVACHDLGEFIRHYPRAKPAFDALGCKELVMQRMG
HENEQVKYEALLAVQKLMVHNWEFLGKQVKIE

Run BLAST on NCBI

transcript from alignment at sc0000001:1826493..1838565+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00000090 ID=TCONS_00000090|Name=TCONS_00000090|organism=Clytia hemisphaerica|type=transcript|length=12073bp|location=Sequence derived from alignment at sc0000001:1826493..1838565+ (Clytia hemisphaerica)
ttcagtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAG
CATGTCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGA
CAAAGACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCA
ACGTCTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATT
ATGCACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAAC
AAAGATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTC
AATTTTCAGTACCAGTAAGCTATTTCCTGTTTTATGAGTTTATCCATTGG
GTTTTCCACATTGAATTACGATTATTGACCCCCTGAAAGAGATTTGGGCT
GAATATAAACCTGCTCAAACCTGTCAGCATCTAgatgaattttcttttga
acatttgaactcaaaacaaaataacCTAGGAAACCCCAGTCCAGGACCAC
TGTcaagttttagatttttgataGGTATACTTCTCATAGTGTCATTCTAC
CAACAAGCTAGCAGTAAAGTTAACAATTAGCTTTTCAAAAGACAGCCTCA
TTGTGGCGTCGTCTTTCTAAAAGGAAAATGAGTGAAGCTTTGAAGTTTGT
AAGTCTGACAGgagaaaatgtttgattttctaTATAATATGTACTACAGC
ATCAGCATTATAAAGCAATTGAAACAATGGTTCATACTAACCCGTTGTTA
AATTTCCTTTATTTATTCCAGAGCAATGACTACTTACAAAGTGCTGCTGA
ATGTTTGCAATGGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAA
ATGCTGATGGTGTTGACAGGTTTGTTATTCGAAAGGATATTTGAGAGTTT
TATTTTTGGCCTACAGATAGATAACTATAGTCTTAAGATATTTGTGTTTC
AGCTATCTGAAATAAAAGAATTTCTAGTAATACAAAACATTTTGGTAGAT
TTTGACTGTCATTATTCAATGTCTATCCAACTTTTAAGGAGCAATTCTTT
AATATAATATCGTCCCTTTGGAGTTTTACACCTGTATTTCTCGGCTTATG
AGCTTTTAGCAATCTTAGCAGTACGTAATCAATCAGCTTTTTGCTTTCAT
GTGACCATATATCTGTATGGGTATCTTAGGGTAAGAAAAAATAATGTTCT
GAAAACGAGTTATTTCGATTCTTTTTTAGCTTGGTATCGGTGCTTCTGAG
TAATCTTGGATTTCAGCTCCAATACCAATTCATTTTCTGTATTTGGATGT
TATCTTTCAATGTTGAAATTGCTGGACGAATTGGAGAGTAAGTCAATGTT
CAGTTGTTTGGGACCTTccataaaatttaaatttcctGAGTTTAAACTTT
CACTACCCCAAGGATAAATTTTGAATTCTCTCAGGGATGAATTTTGATGG
ACAGGTGTTCAATTTGCTTGCAGTTTGACAGAGTTTTAAGGGGTGTGCAA
ATGGAAGTTATCAAAAACTCTACTGTGGTAACGTATATCGTTCCAAGACT
TAATTTGATTGATAATTTATAACTGGTATTTTGCAACTATACTTAAGATT
ATCCTGAGATACTGAGCGTATTATAAAATAATATCTTAAAGTTATCATGG
GTTGGGATAATTTCCAACATTTTTTCAATCCTTTTAGAAATAATGTTATT
CCAGTAATGGCGGACATTTTGAGGACTTCGCAGAAAGAAAAAGTCACCAG
GATCATCATTGCAACCTTCAGAGTAAGTCTCcaactcaaaaattaaaaac
tataaTTCTATATATAACACTTTCTATTAAAGAATTTAAGCCAGCCTATT
TCTCAAATGTAAATATTCTTTCCTAGAAGTTGCTTTTCAGATTTTGCTGT
AGTAATTCAACCAGCACAGGGTTCGATCAGAAAATGTAggctttcaaaaa
atgtgttATCATTGTGTGAACCCTGCAATTACATTACAGTCTGAGAAAAT
TCAAGTTCAGTTTAATCACAGACTGTAACACTTTGAGAAATCTAATAATT
TTTGCTCTCTtgaataaacattttttggatGGTTGAAATATTCAAATAGA
ATTGAGTGGGGTGAAGGGAGGCTGACTTAAAAAAGGGAGATTTGAAATTG
TATTTAGTTTTTGTTGTTTGATTGATTATCactaatttttactttttgtc
tTAGAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCAC
TTATTCAAAGCAAGCTGTTACCGGTAAGTGCCAAGTCTTGAACACTTTTG
AGATTTCCATCTAGATAGAAAAGAGGAACTTATATGGAAAAGACCCAATT
TCCAGCTGCTACTTAAAGCCTGAAATTCTGTCAGTCAGAGTATGTTCCGC
CTTTATCTTCGTCTAGCTCGCCCTGAATCGGAAAAGATCTCTGAATGATG
TGATTGTGAATGAGCAATTATTCCTTAAGCATCGACTTCCACCCGGGCCA
TACCAAACAATCCATATAAAATtatacttaaaggttttgtttttacataa
gtgttcccgtttcatattcccgtttcatatttcatatcaggacatcATAT
CAGGAGGTGTCTacatattgttatattatgcttatataagcaaaaaatgt
ttttcttttcctttttctgaccaatcttgctccacatccgtatcGATCCA
ATGTGGAAAAGCTTGTAGATTTAAATTGATGATTAAGCAAacgttatcac
tcttatttaaaaacaaaacctttaatgtagctctgcttgatgctcatcAA
CTGAAGGGAGACGATAAGttgagaaatccagggaaacgAGTGGCGACGCC
GTCTCGTTGCTTCAGGAGAATATACAGTAGCTAAAGATATGGGAGCTCTC
AGGTCCTCGCCTTCAACTACGGTTGCAAACTTTCTTACTCATCTCGTTAG
ATTATAAATCTTAAAATCACCTATTCTTTCTTTTAGGTTTTCAATGTGTT
GATCAACAAAACGTGGGGAGATGAAGACATCAAAGAAGACCTGGAATTCA
TCAGTGAAAAACTATCCCACAGTGTTCAAGATTTAAGGTATAATTTGTCT
ATCTGTCTGTTTGTTTGTTATCATTCACAAAGTAGGGTAAGCTGGAGAAT
TTCAAAATCAAGATTTGATCAAGATCTGTTGAGGCTTTGCCGAAGTTTTG
ATCTTTGGTTGAATCTCATAGGAATGTATTTTGGGGGGCCTTCGGGCGAT
TTTTAGGCAActtttgcttataaaaactaAGACAAATATTCTGAGCCAGA
CTGGTCAGAGCCTGATTACCGAGTTTCATTGGCCCAGCAAAGattgaaga
ttgaaaataatGCAGGATTTCttatttgaatcaaaaaaatataatttgaa
gaatattaaaaatcaaaatctgtTTACATGTAAAAACTAGTTAAAGATAA
TGTGTCTAAGCAATCTGGTGATTTTTGACGATTGGTGTTTACTACAGTTA
CTGATAAATACCGTctcaatattttgattggtttcttTAAATATCACATT
TCCTTTGAAATTGATCTTCTCTCGTCAACGAGTAAGATAAGAATACCCAA
tcatttcaaagaattttgaatGTTGACTGTCATTTTTAAATTACTTGCAA
TAGAGCTCTGAATAGAAAGttttattgtcttttatttATAAAGAGTTTTA
TTACTATTTTATTCTATTTCATTATTACCACACAACAGTTTATTCATTCG
TCCAATCAACATTCTATAGAATGTTTCATTATCCAGATCTTCTTCCACCA
TGTAAATCACGCcgtcatttttcatctttggtGAACCCTGGGTTTTCTCA
TCCACAACTACTTTCTGTACCCTGGGTAATGAGGCTGTAGCATTTTGTTG
AACAGTGCTCGTTAAATCCTTAATATCAATATGGATAGCTGTATTATTCT
TGTCATCGATAGCCTTTAATACTTCTTCGCTTGTTGGATAGTAAACTCTA
TCAGAATACAATTTTGACAGATACCACTCTTTACCGGGTCGATTTGAGAA
GGTCACTCCGTAAACTTGAGCTTTCGACAGTTTGCGATCCAGAAAATCTA
ACAGCAGCAATGAAACAACGCTTGTCTCTTGCGAGGCCCAAACATAGACA
TCTACTTTTCTGTAGGAGGGAGTAGTTTGACAGTCAGATTTCAAATCACT
GAACAAATTCAACCGGTCGAAAGCTGGATTTTTTATTACGTCAACAACGa
cctttttgaaattataatcGAACCCAGACTCTAGATCCAAATAAGGAATC
ACATGATGTTTTGGCAGCCAATCATATTTTTGGCACGCCTGGTTAGCTTC
AGAAATGAGACACATGGTTATAATATCGTACCCTGATTTCTGAAGTGACT
TTAATTCTTTCATCACCTTCTTCCTACCATCAGAGTCACTCGTTTTAGCG
TCCAAGTAAAACAAGACTCTAGTCTCGGAATCACGTTCTCTTGGCAAATC
ATCAATTAAGTTTACCACATCGCCATCTTCCATTGCGCTGTATTGTTCAA
ACTCGTAATAAAAAAACCCGCGCACGTCTCTTTTATTCAAACGTACAAAC
TGACTGGTTAGTGGTGAATAAATCTCGATATCGGTACACACAACTGACCA
TAACAGCTCGTCTGACACATACCTTAACAATCGGCGATAAAAATCGAACT
TCTTTGGTTCTTCAGCATCGGCGTCATCATAACTGtccaataaaatgctg
acagtTGTCTTGATAACCGCATCGCATGATAACCCTCCCGGGTGTCTAAA
ATCAATCCAAAATCCGCTTGTTGTAGAAACTACAAATAGCAGTAAAATTA
CGGTCACCTTTTTGCACTGCATCATCACTCTGTATGATTCGTTCTGCTTT
ATTTTAAATAACTGCTAAAAAGTGGAATAAAGTAGTTATTAGAAAGAAGC
TTTAATGATTGGATCGAAAATTTGAACCAacgttttaaaaaatgttttca
aatcaaaagtgTGTTTTTTGGACCGCTAACGTTAAGAGATTTTTCCATTT
TCGTCCATTTTACTATAATCCTTGGATTCTTGGTGCGAGTAGAAGCTTTA
AAGTCGtaaaattatatcaaaatatatcagctttattttctcaaaattca
aTACTTTCTGTGACCATGACATGATACTTTAGCTCAAGCATAGTTGCCAA
GTTACTGATCTTATTTCATTGAAGTcaacataaaattttaaaatatcaaa
gccaaagaaagttttaaaaatgataCTTTACTTGAGCTTTCATCTGGACT
AAGTATCACGTCTAGCATTGACAAAAGACTTTATATATCGTAGCAAGGGG
GAAAGAAAGctaatctgtttattttgttttttgtgaGGATCAAATAGACT
GAAAGGTGATCTAGAAACTAGCGTCATCAGTTTTAAGATCAATAAAAACA
CATAGGTCaaaaaattgcactttttactttatataagaaccagtaatttT
TGGCTGAGGCTCCACTGCTCTTAATCATGATGTATCGGTATAAAAAGTTA
GACTATTATTATGTTAAACTTCAATTAAATTTACTTATTGACTACTTCAA
AGGGGTCTGAAATCAGTATTTTTTAAgccatttctgaaatctgagaaCGG
AATTGTTTgattaatttgttcttagattttgttcaaatttaagTGTACtc
atgttcttatgaaattattCTCATGAACAAGAAAAGCCTATATAACGTTT
ATCGTTGACCTTTTAATAATAAGCTTTTTATTTAGATAAGATTATGACTA
TGGGGTTTTGACGCAAACGGGGAATAACTTTAATCCTATTTTTAGCATCT
TAAAAAAAGTACATTTCTTATACTGATGGTGTAAGTTAGATGTAATCAAA
TCTTAGCGATTCTAAAAAATGTCTATTTCGGCtgacaaacatttttttaa
actaacatcttttgattttttgtacttttcCTCGAtataagattttaaaa
tttagaacTAAAATTTAGCTTCTTGAAAGTTAGAGTAAAACATCTAGCTA
ATGTATGTAATTTGATAACCAAAGCAACGTTTTGGTCGATCTTAGGTCAA
AGTTACAACAAGATAACATGTAAAGTACTACTACcttcccccccaaaaaa
aaacaatagcgAGTTTGTACCTGTCTTTTCTGAACCAAAGACGGTTAATT
TTCctagatcctgactgactgaggacgacggtaaatcagcgcTCACGCTG
TTCTTGTTTTTGTGGGTTAAAAATACGGGATATAACTTTTCATTTCAAGC
CAGTCATTCTTCCTCAAAGCCAAAGAGtagatacataaactcgttaATAA
ACTGCCGAAAAGGTCAAATCCTTGTACGAAATATTTCTGGAACAGCTTGC
TTTAGTAGCTTGattcatttttattgtttttttacagCACTTGGGATGAG
TATGTCGCAGAAGTGAAATCTGGTCGATTAGAATGGAGTCCTGTCCACAG
AGAGGAAAAATTCTGGGTATGCTTATATTTTACCTTTAAGGTTTTCGAAA
TAAGCGAGAAGGAGGTGGAGGTGtggtggccgagtggtctaaagCGTCAG
AAAGTGAAACCAGGGGTCtccgctccttccaattttcTGTTCAGTTCGGA
TTTAAAACCATCAAAAGACTGTAAGTCATAGATTATTAGGCTATTATCCA
ACCATCTTACTTATCTATCCAATTTTAGTCACTAAAACCAAATTGGGTAT
GTACCTAGCTTAAATTATGAATTTGATATCTGatagtttttttttccaaa
acaatgTTTATTTTGGGCTAAATATCTTTGGAATGACATTGTTGGGTAAA
TTACTCCCCTTCTCTTTACCATCCCGACTTGACTTTACGCAATTGCATAT
GGGAACTTTGCACATTTACTTGGCATTTGACTTTTACGATCatgtttttt
tccaatttttagcGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGA
ACTCCTAAAGTAAGACTTTTATCCCTGTCATCTGTGATAAGAGATATTTC
TGGCCGTATTGATTAAAAATTTGTTTACGGTGTGAGGGTCAtcaaaaatt
actaaaaattgATACTCGATGCCATTCTGCTTTTTGTCgaataatcaaac
aaaaatcagGGGGGTGGAAATAAAGAAATTGAGGGAAAAATGAAGATGGC
ATTTCTACTTAGCTgataccagatgtggaaatttGCTACGGCACGCTTTG
CTTTCTATGTCGGGCGATTTCTACATTGGTAGTAATTTGGCCTGtccctt
cagagctttagtgtgggcggccgccaatacaccATTGGAATATAAGATAG
AATctctcccctaccttcgggtaaaaaaactatcaaaaaaggGAACCTGC
GAATCAGCTTGGATTGTGTTAAACCTTTCTTATCTTCATTATCAATCAAT
AAGCCATGCCATCCAGCATATATTAATATACATATATATTAAAAACAcat
ttattggacctacctggaggtcctataaattaacctctgtccgtccatcc
gttcgttcgtccgtccgtttgttaccagcttttctcaggattggctcatt
agttttttctgatttttggcacaatgatgcaaaatgccaatgcccaaaat
gtgacggagcccgattttcgaaaaaaattcatttccggccgaaaatgccg
gaaatatgccggaaaaaccgtttttttggcatattctcaagatttcatca
ttagttttttctgattttttgcacaaagatgcgtattagcaatgcccaaa
ttAGCCgtgtccgatttttgagaaaaaaatttttccggtcgaaaatgccg
gaaatatgccggaaatcgccgtttttgcagattttcatcggactttttcc
ttatatttcgttgttttttcacacaaaaatattattaatagggatgtcca
cgatcaagcatgattcaattgtcaataaaactgatatttgaagccggaac
tttctgaAAATCGCCGGAatagccgattttcgccggaaaaacggtgtttc
ttgaatttcttgagctgtactttatattttttcatgaaatttttcacact
gatgcaaaatggtaatacctaaattgtgacgaagcccgattttcgaaaaa
aattcatttccggccgaaaatgccggaaatatgccggaaaacgttttttc
tgattttgcgcccaaagatgcgtattaacaatgtccaAATCATGGCCGAG
Tccaattcttgagaaaaaattttttccggcggaaaatgcctgaaatatgc
cggaaatcgccgtttttctagattttcattggactttttccttataattg
gtagttttttcattcaaaaacattattaatagcaatgcccaccatcaagc
atgtttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNtgacaatacctaaaatgtgacggagcccgatttttgaaaaacat
ttttttccggccgaaaatgccggaaatatgccggaaaaccggttttttga
cattttttatttttatttttttctgattttttgcataaagatgcgtattt
cgcaatgctcaaaacatggccgacttcgatttttgagaaaaaattttttc
cggttgaaaattccggaaattgctgtttttgcagattttcattggatttt
ttccttatatttctatgtttttcacacaaaaacattattgataacaatgc
tcaccatcaagcatgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNaccatcaagcatgattcaattttcaataaaactgat
ttttgcgaccagaactttctatctattttttccctacaacccttccctct
ccccccaccatcaatcaatgatgaatttcttgcgttatgcattttcgcta
acaATATgcgttttctgactgattttttttcattttcctccttgcattgc
tatctaactttcatcatcaggtaggtccattcagcatctagcttgttttc
tAAGTAAAATACGAAGCTTCTCATGAGACAAACCTATATTATCAAgtaca
gaattaaaaaaaaatNTTttttctagtttaaatttgccactaatgtactg
gcaaaaaccggggtatttccgtagaaaacatcacgtcatgaatatcatga
atagagttTAAAAACTATGTTCAAACGTCTTCATATATGTAcactttttg
caaattttggatTTGCCACCAATTTCTTACCTTTGTACTTTTACTTTCAT
TAATATAGGATTCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCAT
TCAAGCTGTTGCATGCCACGATTTGGGTGAATTCATTCGACACTACCCTC
GTGCTAAACCGTAAGTAGTGGCTTGGCCATAGTAGTGTTTAGAATTGTCG
GATCATCTTATAAAAACCCGCCAAGGACCCAAGTTTTTCGGTCCTTGAAA
TGTCCCGGAAAAAGTGGGGTTTTTTGGGGGTTTTTATTAGATTTTCCtga
tttcttttttggacctaccccggtggagatcctataaattaaccgttgtc
cgttcgttcgtccgtttgtTCGTTATGAGCTTTTCTCCAGATTGACTCAT
TCAATTATCcgatattttgcacaaagaatcaaaatggtaaaccctcgaat
gtgacggagcccgattttgggccaaaatatgcccaaaaataaggtttttt
gagatttcctCGAGTTTGAATCATTAAATGTTTCTGAATTTAATGTATTT
AATGTTTTCTGTTAAATAGCAAGGTGGGTCCTTAAAAGTATCacttgatt
gttttttttttctgtagaGCTTTTGATGCTTTGGGATGCAAAGAGTTGGT
GATGCAGCGAATGGGTCATGAGAACGAACAAGTAAAATatgaagcacttt
tagctgttcAAAAACTTATGGTTCATAATTGGTAAGAGCTATGTTCATCT
GTTTCTTTAGCGAGTGATTCAGACTTCTTTTCGAGTAAAcccaatttttg
acaaaaacatTGCAATAATCCAAAAATACATTCAGCTTTTGATGTTAAAG
GTCGTAGATCTATGTCTTGTTTTCGTAGTAGTATTTGTTTCTACCCCCTT
TTTATACGTCGTATACCTAATAATCTTTAATTTGAATCGcaaacctctac
aaaaccccaggtaaaACACATCGAATCCGTTaatggatgccagcagccta
aataatctttgaaaatcttaattttaaaaTGTCTCATTAGTTATTCGAAG
CGATTTCTATTCCCCTTGGGGCCTATTTATAGGCTAAATCACCCTcagtt
attcgaatttttcgtATTGAGAGATTGATTTTCTACGattaaaaaacgtt
ttttctgttaacaatagaccttttcataaattacgtcgggaacatcactt
gtctcgttttgaaattattgccatggtgattaacttccagcagttttatt
aaaactacttcctatttataaaagaatcatttattgtctcaagggacata
atcaccatggtaattgtttgaatacgaggcaagcgaTGTTCCTGATGTAA
CTTATGTAAAGgtctattttttcaaacttattcTTTCTTCCAAAAGCATA
AGTAAAAATTCTGTGTTTATTACGCTCAACTCAACCACAATGCCTCGATT
ACTTCAGAAAATTCCATCTTATTAAGGTTAAGTTGAGAATCTCGtgggaa
aacaaatttttcatttatacgAAATCCCGcttattcgaagtaaattctta
tccccCCTTGGAGTTTCGAATGATCAAGAGTCTACTGTATCCCATTTGAC
TCTTTTCTTTTACTGTGGCACCAATTAGAACATTTGAGTAAGTAGAAAAA
TGTCCTAGCCTTATTTTATCTTTCATCTTTCAGGGAATTCCTGGGTAAGC
AAGTCAAGATCGAATGATTATTTAAATATGTTAGCACTGGTACAAAtata
ttgaatttgaatgacgaataaaaaagaagttttttacacaaaattaGGAC
TATAAATTATATTTTATACCAGGcaattttaatttattgaagtttttttg
ggtcaagctggagtttttacaagttctttgatgactctgttggtcgttaa
gtgttgagacaaacgattttattactttttctaaagaacgcgtcatccct
attgtttaaaaataaccaatcagttaagcatcttgtaaaaactccagctc
atcccgttTTTTTAGATTAATTAAATTTATCCTTGAAGCAATCAGACCTA
TATTATTATTCTTTTTATATCTTACCTCCCCTCCTCAATCTTTGTTCAGT
TCACAAACTGTGAACATTTCTCTACTACATACCGTATTTAGTTTatccat
agtcattataaaaaccctggtctggcaatgtattgttttagctttttgtt
tttgatcacgttaccaaaatctcctcttgggattggtctattttccaaTC
AGATGATCAAAAGGtctgcaaaataaatcgattttggtacgtaagctcta
tcttttaacaataaaaagagacaaaaggtttccagaccagtgtttttata
atgactatggtttaTCACTGCTTTTGTAAAACCTATTCCACATAGAAATA
AATACCCAAAAAATAGCTAATTTCTTTTGCATATtattcagaaaaatatt
ttattttctatttgcAATTATAAACTCATTATCATattaaagtaaaagaa
aataattacaATGATTCATGTTCAATCACCTGTGTCCAATtattttgaga
ctgaaattcaaGCTTTTCTGgccttgaaatatttcatgcaAATATATGTG
AAAATTTGTTACTTTAAGTAAATCTCTGTTAAGTAAATCTCATTAGCTAG
ATAACCGTTGGTGctagaaaatt

Coding sequence (CDS) from alignment at sc0000001:1826493..1838565+

>TCONS_00000090 ID=TCONS_00000090|Name=TCONS_00000090|organism=Clytia hemisphaerica|type=CDS|length=12639bp|location=Sequence derived from alignment at sc0000001:1826493..1838565+ (Clytia hemisphaerica)
cagtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCA
TGTCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACA
AAGACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAAC
GTCTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTAT
GCACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAA
AGATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAA
TTTTCAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCA
ATGGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATG
GTGTTGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTC
CAATACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAAT
TGCTGGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTT
TGAGGACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTC
AGAAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACT
TATTCAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGT
GGGGAGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTA
TCCCACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGT
GAAATCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCT
GGcGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAG
ATTCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGT
TGCATGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAAC
CaGCTTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGT
CATGAGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACT
TATGGTTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAc
agtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCAT
GTCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAA
AGACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACG
TCTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATG
CACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAA
GATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAAT
TTTCAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAA
TGGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGG
TGTTGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCC
AATACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATT
GCTGGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTT
GAGGACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCA
GAAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTT
ATTCAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTG
GGGAGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTAT
CCCACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTG
AAATCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTG
GcGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGA
TTCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTT
GCATGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACC
aGCTTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTC
ATGAGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTT
ATGGTTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAca
gtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATG
TCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAA
GACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGT
CTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGC
ACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAG
ATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATT
TTCAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAAT
GGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGT
GTTGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCA
ATACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTG
CTGGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTG
AGGACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAG
AAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTA
TTCAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGG
GGAGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATC
CCACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGA
AATCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGG
cGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGAT
TCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTG
CATGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCa
GCTTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCA
TGAGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTA
TGGTTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcag
tgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGT
CATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAG
ACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTC
TGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCA
CGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGA
TGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTT
TCAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATG
GGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTG
TTGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAA
TACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGC
TGGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGA
GGACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGA
AATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTAT
TCAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGG
GAGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCC
CACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAA
ATCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGc
GCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATT
CTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGC
ATGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaG
CTTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCAT
GAGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTAT
GGTTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagt
gtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTC
ATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGA
CAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCT
GGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCAC
GTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGAT
GCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTT
CAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGG
GTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGT
TGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAAT
ACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCT
GGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAG
GACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAA
ATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATT
CAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGG
AGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCC
ACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAA
TCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcG
CGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTC
TGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCA
TGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGC
TTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATG
AGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATG
GTTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagtg
tatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTCA
TCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGAC
AGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCTG
GCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCACG
TGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGATG
CCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTTC
AGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGGG
TGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGTT
GACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAATA
CCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCTG
GACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAGG
ACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAAA
TTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATTC
AAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGGA
GATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCCA
CAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAAT
CTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcGC
GAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTCT
GGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCAT
GCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGCT
TTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATGA
GAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATGG
TTCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagtgt
atCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTCAT
CCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGACA
GGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCTGG
CCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCACGT
GGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGATGC
CGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTTCA
GTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGGGT
GTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGTTG
ACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAATAC
CAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCTGG
ACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAGGA
CTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAAAT
TTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATTCA
AAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGGAG
ATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCCAC
AGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAATC
TGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcGCG
AAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTCTG
GTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCATG
CCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGCTT
TTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATGAG
AACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATGGT
TCATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagtgta
tCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTCATC
CAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGACAG
GGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCTGGC
CACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCACGTG
GCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGATGCC
GGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTTCAG
TACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGGGTG
TTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGTTGA
CAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAATACC
AATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCTGGA
CGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAGGAC
TTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAAATT
TGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATTCAA
AGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGGAGA
TGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCCACA
GTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAATCT
GGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcGCGA
AAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTCTGG
TGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCATGC
CACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGCTTT
TGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATGAGA
ACGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATGGTT
CATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagtgtat
CTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTCATCC
AATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGACAGG
GTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCTGGCC
ACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCACGTGG
CCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGATGCCG
GATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTTCAGT
ACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGGGTGT
TACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGTTGAC
AGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAATACCA
ATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCTGGAC
GAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAGGACT
TCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAAATTT
GTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATTCAAA
GCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGGAGAT
GAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCCACAG
TGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAATCTG
GTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcGCGAA
AATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTCTGGT
GAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCATGCC
ACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGCTTTT
GATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATGAGAA
CGAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATGGTTC
ATAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagtgtatC
TGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTCATCCA
ATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGACAGGG
TCAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCTGGCCA
CCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCACGTGGC
CAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGATGCCGG
ATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTTCAGTA
CCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGGGTGTT
ACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGTTGACA
GCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAATACCAA
TTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCTGGACG
AATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAGGACTT
CGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAAATTTG
TTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATTCAAAG
CAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGGAGATG
AAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCCACAGT
GTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAATCTGG
TCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcGCGAAA
ATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTCTGGTG
AAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCATGCCA
CGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGCTTTTG
ATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATGAGAAC
GAACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATGGTTCA
TAATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGAcagtgtatCT
GCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAGCATGTCATCCAA
TACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGACAAAGACAGGGT
CAAAATAATACACCAAACTGCTGCCAAACACAATTTCAACGTCTGGCCAC
CATTGAAGAATTTGTTGAATCGTGACGATCAGATCATTATGCACGTGGCC
AGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAACAAAGATGCCGGA
TTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTCAATTTTCAGTAC
CAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTGCAATGGGTGTTA
CGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGATGGTGTTGACAG
CTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGCTCCAATACCAAT
TCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAAATTGCTGGACGA
ATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACATTTTGAGGACTTC
GCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCTTCAGAAATTTGT
TAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCACTTATTCAAAGC
AAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAACGTGGGGAGATGA
AGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAACTATCCCACAGTG
TTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAAGTGAAATCTGGT
CGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATTCTGGcGCGAAAA
TGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAAAGATTCTGGTGA
AGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCTGTTGCATGCCAC
GATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAAACCaGCTTTTGA
TGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGGGTCATGAGAACG
AACAAGTAAAATatgaagcacttttagctgttcAAAAACTTATGGTTCAT
AATTGGGAATTCCTGGGTAAGCAAGTCAAGATCGAATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000046	XLOC_000046	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00000090-protein	TCONS_00000090-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000001	supercontig	sc0000001:1826493..1838565 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.3792	36.0935	24.4982	19.7745	23.3033	15.3303	34.4413	39.722	28.7946	24.4821	25.5737	21.3273	15.0902	14.1703	19.4667	20.4714	21.3555	23.2024	14.461	15.3769	32.9374	27.1551	25.3737	24.148	14.0402	17.9351	40.3517	29.1551	50.0716	40.5514

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR011987	ATPase_V1-cplx_hsu_C
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain

Vocabulary: **Biological Process**
Term	Definition
GO:0015991	ATP hydrolysis coupled proton transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0016820	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0005488	binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
cellular_component	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain
molecular_function	GO:0005488	binding
molecular_function	GO:0016820	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Blast

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BLAST of TCONS_00000090 vs. Swiss-Prot (Human)
Match: VATH (V-type proton ATPase subunit H OS=Homo sapiens GN=ATP6V1H PE=1 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 4.106e-120
Identity = 202/403 (50.12%), Postives = 271/403 (67.25%), Query Frame = 3

Query:    3 QCICTMMTLIREVAKEHVIQYXXXXXXXXXXXXXXXXKIIHQTAAKHNFNVWPPLKNLLNRDDQIIMHVASRLLAKLSTFSKTKMPDSDLVFYLTWLKGQFS---------------VPSND---YLQSAAECLQWVLRVDEYRLPFVNADGXXXXXXXXXXNLGFQLQYQFIFCIWMLSFNVEIAGRIGENNVIPVMADILRTSQKEKVTRIIIATFRNLLEKP---EQSKNACVALIQSKLLPVFNVLINKTWGDEDIKEDLEFISEKLSHSVQDLSTWDEYVAEVKSGRLEWSPVHREEKFWRENAIKICEKNYELLKILVKLLQFNTDPIIQAVACHDLGEFIRHYPRAKPAFDALGCKELVMQRMGHENEQVKYEALLAVQKLMVHNWEFLGKQVKIE 1148
            QC  T + L+  + KE  +QY+L M+DD+L  +  RV I    A       WP    +LNR D   +H+A+R++AKL+ + K  M  SDL +Y  W+K Q S               V S+D   Y+Q  A CLQ +LRV+EYR  +V ADGV+ ++ VL +  GFQLQYQ IF IW+L+F+ ++   +   N+IPV++DIL+ S KEKVTRII+A FRN LEK    E  +   +A+IQ K+L     L  + + DEDI ED++F+ EKL  SVQDLS++DEY +E+KSGRLEWSPVH+ EKFWRENA+++ EKNYELLKIL KLL+ + DP + AVA HD+GE++RHYPR K   + LG K+LVM  M HE++QV+Y ALLAVQKLMVHNWE+LGKQ++ E
Sbjct:   72 QCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSE 474

The following BLAST results are available for this feature:

BLAST of TCONS_00000090 vs. Swiss-Prot (Human)

BLAST of TCONS_00000090 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
VATH	4.106e-120	50.12	V-type proton ATPase subunit H OS=Homo sapiens GN=...	[more]

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TCONS_00000090 (transcript) - C. hemisphaerica

ZOOM

x 1

POSITION

0