TCONS_00000089 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000089
Unique NameTCONS_00000089
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1371

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000089 ID=TCONS_00000089|Name=TCONS_00000089|organism=Clytia hemisphaerica|type=transcript|length=1371bp
ttcagtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAG
CATGTCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGA
CAAAGACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCA
ACGTCTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATT
ATGCACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAAC
AAAGATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTC
AATTTTCAGTACCAAGCAATGACTACTTACAAAGTGCTGCTGAATGTTTG
CAATGGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAAATGCTGA
TGGTGTTGACAGCTTGGTATCGGTGCTTCTGAGTAATCTTGGATTTCAGC
TCCAATACCAATTCATTTTCTGTATTTGGATGTTATCTTTCAATGTTGAA
ATTGCTGGACGAATTGGAGAAAATAATGTTATTCCAGTAATGGCGGACAT
TTTGAGGACTTCGCAGAAAGAAAAAGTCACCAGGATCATCATTGCAACCT
TCAGAAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCA
CTTATTCAAAGCAAGCTGTTACCGGTTTTCAATGTGTTGATCAACAAAAC
GTGGGGAGATGAAGACATCAAAGAAGACCTGGAATTCATCAGTGAAAAAC
TATCCCACAGTGTTCAAGATTTAAGCACTTGGGATGAGTATGTCGCAGAA
GTGAAATCTGGTCGATTAGAATGGAGTCCTGTCCACAGAGAGGAAAAATT
CTGGcGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGAACTCCTAA
AGATTCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCATTCAAGCT
GTTGCATGCCACGATTTGGGTGAATTCATTCGACACTACCCTCGTGCTAA
ACCaGCTTTTGATGCTTTGGGATGCAAAGAGTTGGTGATGCAGCGAATGG
GTCATGAGAACGAACAAGTAAAATatgaagcacttttagctgttcAAAAA
CTTATGGTTCATAATTGGTAAGAGCTATGTTCATCTGTTTCTTTAGCGAG
TGATTCAGACTTCTTTTCGAGTAAAcccaatttttgacaaaaacatTGCA
ATAATCCAAAAATACATTCAGCTTTTGATGTTAAAGGTCGTAGATCTATG
TCTTGTTTTCGTAGTAGTATTTGTTTCTACCCCCTTTTTATACGTCGTAT
ACCTAATAATCTTTAATTTGAATCGcaaacctctacaaaaccccaggtaa
aACACATCGAATCCGTTaatg
Run BLAST on NCBI

transcript from alignment at sc0000001:1826493..1836877+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000089 ID=TCONS_00000089|Name=TCONS_00000089|organism=Clytia hemisphaerica|type=transcript|length=10385bp|location=Sequence derived from alignment at sc0000001:1826493..1836877+ (Clytia hemisphaerica)
ttcagtgtatCTGCACAATGATGACTCTAATCCGTGAAGTAGCCAAGGAG
CATGTCATCCAATACGTCCTAGTCATGCTTGACGATCTTCTACTCGTCGA
CAAAGACAGGGTCAAAATAATACACCAAACTGCTGCCAAACACAATTTCA
ACGTCTGGCCACCATTGAAGAATTTGTTGAATCGTGACGATCAGATCATT
ATGCACGTGGCCAGCCGATTGTTAGCTAAATTGTCTACGTTCAGTAAAAC
AAAGATGCCGGATTCAGATTTAGTATTTTATTTGACATGGTTGAAAGGTC
AATTTTCAGTACCAGTAAGCTATTTCCTGTTTTATGAGTTTATCCATTGG
GTTTTCCACATTGAATTACGATTATTGACCCCCTGAAAGAGATTTGGGCT
GAATATAAACCTGCTCAAACCTGTCAGCATCTAgatgaattttcttttga
acatttgaactcaaaacaaaataacCTAGGAAACCCCAGTCCAGGACCAC
TGTcaagttttagatttttgataGGTATACTTCTCATAGTGTCATTCTAC
CAACAAGCTAGCAGTAAAGTTAACAATTAGCTTTTCAAAAGACAGCCTCA
TTGTGGCGTCGTCTTTCTAAAAGGAAAATGAGTGAAGCTTTGAAGTTTGT
AAGTCTGACAGgagaaaatgtttgattttctaTATAATATGTACTACAGC
ATCAGCATTATAAAGCAATTGAAACAATGGTTCATACTAACCCGTTGTTA
AATTTCCTTTATTTATTCCAGAGCAATGACTACTTACAAAGTGCTGCTGA
ATGTTTGCAATGGGTGTTACGCGTGGACGAGTACAGATTACCATTCGTAA
ATGCTGATGGTGTTGACAGGTTTGTTATTCGAAAGGATATTTGAGAGTTT
TATTTTTGGCCTACAGATAGATAACTATAGTCTTAAGATATTTGTGTTTC
AGCTATCTGAAATAAAAGAATTTCTAGTAATACAAAACATTTTGGTAGAT
TTTGACTGTCATTATTCAATGTCTATCCAACTTTTAAGGAGCAATTCTTT
AATATAATATCGTCCCTTTGGAGTTTTACACCTGTATTTCTCGGCTTATG
AGCTTTTAGCAATCTTAGCAGTACGTAATCAATCAGCTTTTTGCTTTCAT
GTGACCATATATCTGTATGGGTATCTTAGGGTAAGAAAAAATAATGTTCT
GAAAACGAGTTATTTCGATTCTTTTTTAGCTTGGTATCGGTGCTTCTGAG
TAATCTTGGATTTCAGCTCCAATACCAATTCATTTTCTGTATTTGGATGT
TATCTTTCAATGTTGAAATTGCTGGACGAATTGGAGAGTAAGTCAATGTT
CAGTTGTTTGGGACCTTccataaaatttaaatttcctGAGTTTAAACTTT
CACTACCCCAAGGATAAATTTTGAATTCTCTCAGGGATGAATTTTGATGG
ACAGGTGTTCAATTTGCTTGCAGTTTGACAGAGTTTTAAGGGGTGTGCAA
ATGGAAGTTATCAAAAACTCTACTGTGGTAACGTATATCGTTCCAAGACT
TAATTTGATTGATAATTTATAACTGGTATTTTGCAACTATACTTAAGATT
ATCCTGAGATACTGAGCGTATTATAAAATAATATCTTAAAGTTATCATGG
GTTGGGATAATTTCCAACATTTTTTCAATCCTTTTAGAAATAATGTTATT
CCAGTAATGGCGGACATTTTGAGGACTTCGCAGAAAGAAAAAGTCACCAG
GATCATCATTGCAACCTTCAGAGTAAGTCTCcaactcaaaaattaaaaac
tataaTTCTATATATAACACTTTCTATTAAAGAATTTAAGCCAGCCTATT
TCTCAAATGTAAATATTCTTTCCTAGAAGTTGCTTTTCAGATTTTGCTGT
AGTAATTCAACCAGCACAGGGTTCGATCAGAAAATGTAggctttcaaaaa
atgtgttATCATTGTGTGAACCCTGCAATTACATTACAGTCTGAGAAAAT
TCAAGTTCAGTTTAATCACAGACTGTAACACTTTGAGAAATCTAATAATT
TTTGCTCTCTtgaataaacattttttggatGGTTGAAATATTCAAATAGA
ATTGAGTGGGGTGAAGGGAGGCTGACTTAAAAAAGGGAGATTTGAAATTG
TATTTAGTTTTTGTTGTTTGATTGATTATCactaatttttactttttgtc
tTAGAATTTGTTAGAGAAGCCTGAACAATCAAAAAATGCATGCGTTGCAC
TTATTCAAAGCAAGCTGTTACCGGTAAGTGCCAAGTCTTGAACACTTTTG
AGATTTCCATCTAGATAGAAAAGAGGAACTTATATGGAAAAGACCCAATT
TCCAGCTGCTACTTAAAGCCTGAAATTCTGTCAGTCAGAGTATGTTCCGC
CTTTATCTTCGTCTAGCTCGCCCTGAATCGGAAAAGATCTCTGAATGATG
TGATTGTGAATGAGCAATTATTCCTTAAGCATCGACTTCCACCCGGGCCA
TACCAAACAATCCATATAAAATtatacttaaaggttttgtttttacataa
gtgttcccgtttcatattcccgtttcatatttcatatcaggacatcATAT
CAGGAGGTGTCTacatattgttatattatgcttatataagcaaaaaatgt
ttttcttttcctttttctgaccaatcttgctccacatccgtatcGATCCA
ATGTGGAAAAGCTTGTAGATTTAAATTGATGATTAAGCAAacgttatcac
tcttatttaaaaacaaaacctttaatgtagctctgcttgatgctcatcAA
CTGAAGGGAGACGATAAGttgagaaatccagggaaacgAGTGGCGACGCC
GTCTCGTTGCTTCAGGAGAATATACAGTAGCTAAAGATATGGGAGCTCTC
AGGTCCTCGCCTTCAACTACGGTTGCAAACTTTCTTACTCATCTCGTTAG
ATTATAAATCTTAAAATCACCTATTCTTTCTTTTAGGTTTTCAATGTGTT
GATCAACAAAACGTGGGGAGATGAAGACATCAAAGAAGACCTGGAATTCA
TCAGTGAAAAACTATCCCACAGTGTTCAAGATTTAAGGTATAATTTGTCT
ATCTGTCTGTTTGTTTGTTATCATTCACAAAGTAGGGTAAGCTGGAGAAT
TTCAAAATCAAGATTTGATCAAGATCTGTTGAGGCTTTGCCGAAGTTTTG
ATCTTTGGTTGAATCTCATAGGAATGTATTTTGGGGGGCCTTCGGGCGAT
TTTTAGGCAActtttgcttataaaaactaAGACAAATATTCTGAGCCAGA
CTGGTCAGAGCCTGATTACCGAGTTTCATTGGCCCAGCAAAGattgaaga
ttgaaaataatGCAGGATTTCttatttgaatcaaaaaaatataatttgaa
gaatattaaaaatcaaaatctgtTTACATGTAAAAACTAGTTAAAGATAA
TGTGTCTAAGCAATCTGGTGATTTTTGACGATTGGTGTTTACTACAGTTA
CTGATAAATACCGTctcaatattttgattggtttcttTAAATATCACATT
TCCTTTGAAATTGATCTTCTCTCGTCAACGAGTAAGATAAGAATACCCAA
tcatttcaaagaattttgaatGTTGACTGTCATTTTTAAATTACTTGCAA
TAGAGCTCTGAATAGAAAGttttattgtcttttatttATAAAGAGTTTTA
TTACTATTTTATTCTATTTCATTATTACCACACAACAGTTTATTCATTCG
TCCAATCAACATTCTATAGAATGTTTCATTATCCAGATCTTCTTCCACCA
TGTAAATCACGCcgtcatttttcatctttggtGAACCCTGGGTTTTCTCA
TCCACAACTACTTTCTGTACCCTGGGTAATGAGGCTGTAGCATTTTGTTG
AACAGTGCTCGTTAAATCCTTAATATCAATATGGATAGCTGTATTATTCT
TGTCATCGATAGCCTTTAATACTTCTTCGCTTGTTGGATAGTAAACTCTA
TCAGAATACAATTTTGACAGATACCACTCTTTACCGGGTCGATTTGAGAA
GGTCACTCCGTAAACTTGAGCTTTCGACAGTTTGCGATCCAGAAAATCTA
ACAGCAGCAATGAAACAACGCTTGTCTCTTGCGAGGCCCAAACATAGACA
TCTACTTTTCTGTAGGAGGGAGTAGTTTGACAGTCAGATTTCAAATCACT
GAACAAATTCAACCGGTCGAAAGCTGGATTTTTTATTACGTCAACAACGa
cctttttgaaattataatcGAACCCAGACTCTAGATCCAAATAAGGAATC
ACATGATGTTTTGGCAGCCAATCATATTTTTGGCACGCCTGGTTAGCTTC
AGAAATGAGACACATGGTTATAATATCGTACCCTGATTTCTGAAGTGACT
TTAATTCTTTCATCACCTTCTTCCTACCATCAGAGTCACTCGTTTTAGCG
TCCAAGTAAAACAAGACTCTAGTCTCGGAATCACGTTCTCTTGGCAAATC
ATCAATTAAGTTTACCACATCGCCATCTTCCATTGCGCTGTATTGTTCAA
ACTCGTAATAAAAAAACCCGCGCACGTCTCTTTTATTCAAACGTACAAAC
TGACTGGTTAGTGGTGAATAAATCTCGATATCGGTACACACAACTGACCA
TAACAGCTCGTCTGACACATACCTTAACAATCGGCGATAAAAATCGAACT
TCTTTGGTTCTTCAGCATCGGCGTCATCATAACTGtccaataaaatgctg
acagtTGTCTTGATAACCGCATCGCATGATAACCCTCCCGGGTGTCTAAA
ATCAATCCAAAATCCGCTTGTTGTAGAAACTACAAATAGCAGTAAAATTA
CGGTCACCTTTTTGCACTGCATCATCACTCTGTATGATTCGTTCTGCTTT
ATTTTAAATAACTGCTAAAAAGTGGAATAAAGTAGTTATTAGAAAGAAGC
TTTAATGATTGGATCGAAAATTTGAACCAacgttttaaaaaatgttttca
aatcaaaagtgTGTTTTTTGGACCGCTAACGTTAAGAGATTTTTCCATTT
TCGTCCATTTTACTATAATCCTTGGATTCTTGGTGCGAGTAGAAGCTTTA
AAGTCGtaaaattatatcaaaatatatcagctttattttctcaaaattca
aTACTTTCTGTGACCATGACATGATACTTTAGCTCAAGCATAGTTGCCAA
GTTACTGATCTTATTTCATTGAAGTcaacataaaattttaaaatatcaaa
gccaaagaaagttttaaaaatgataCTTTACTTGAGCTTTCATCTGGACT
AAGTATCACGTCTAGCATTGACAAAAGACTTTATATATCGTAGCAAGGGG
GAAAGAAAGctaatctgtttattttgttttttgtgaGGATCAAATAGACT
GAAAGGTGATCTAGAAACTAGCGTCATCAGTTTTAAGATCAATAAAAACA
CATAGGTCaaaaaattgcactttttactttatataagaaccagtaatttT
TGGCTGAGGCTCCACTGCTCTTAATCATGATGTATCGGTATAAAAAGTTA
GACTATTATTATGTTAAACTTCAATTAAATTTACTTATTGACTACTTCAA
AGGGGTCTGAAATCAGTATTTTTTAAgccatttctgaaatctgagaaCGG
AATTGTTTgattaatttgttcttagattttgttcaaatttaagTGTACtc
atgttcttatgaaattattCTCATGAACAAGAAAAGCCTATATAACGTTT
ATCGTTGACCTTTTAATAATAAGCTTTTTATTTAGATAAGATTATGACTA
TGGGGTTTTGACGCAAACGGGGAATAACTTTAATCCTATTTTTAGCATCT
TAAAAAAAGTACATTTCTTATACTGATGGTGTAAGTTAGATGTAATCAAA
TCTTAGCGATTCTAAAAAATGTCTATTTCGGCtgacaaacatttttttaa
actaacatcttttgattttttgtacttttcCTCGAtataagattttaaaa
tttagaacTAAAATTTAGCTTCTTGAAAGTTAGAGTAAAACATCTAGCTA
ATGTATGTAATTTGATAACCAAAGCAACGTTTTGGTCGATCTTAGGTCAA
AGTTACAACAAGATAACATGTAAAGTACTACTACcttcccccccaaaaaa
aaacaatagcgAGTTTGTACCTGTCTTTTCTGAACCAAAGACGGTTAATT
TTCctagatcctgactgactgaggacgacggtaaatcagcgcTCACGCTG
TTCTTGTTTTTGTGGGTTAAAAATACGGGATATAACTTTTCATTTCAAGC
CAGTCATTCTTCCTCAAAGCCAAAGAGtagatacataaactcgttaATAA
ACTGCCGAAAAGGTCAAATCCTTGTACGAAATATTTCTGGAACAGCTTGC
TTTAGTAGCTTGattcatttttattgtttttttacagCACTTGGGATGAG
TATGTCGCAGAAGTGAAATCTGGTCGATTAGAATGGAGTCCTGTCCACAG
AGAGGAAAAATTCTGGGTATGCTTATATTTTACCTTTAAGGTTTTCGAAA
TAAGCGAGAAGGAGGTGGAGGTGtggtggccgagtggtctaaagCGTCAG
AAAGTGAAACCAGGGGTCtccgctccttccaattttcTGTTCAGTTCGGA
TTTAAAACCATCAAAAGACTGTAAGTCATAGATTATTAGGCTATTATCCA
ACCATCTTACTTATCTATCCAATTTTAGTCACTAAAACCAAATTGGGTAT
GTACCTAGCTTAAATTATGAATTTGATATCTGatagtttttttttccaaa
acaatgTTTATTTTGGGCTAAATATCTTTGGAATGACATTGTTGGGTAAA
TTACTCCCCTTCTCTTTACCATCCCGACTTGACTTTACGCAATTGCATAT
GGGAACTTTGCACATTTACTTGGCATTTGACTTTTACGATCatgtttttt
tccaatttttagcGCGAAAATGCAATCAAGATCTGCGAAAAGAATTACGA
ACTCCTAAAGTAAGACTTTTATCCCTGTCATCTGTGATAAGAGATATTTC
TGGCCGTATTGATTAAAAATTTGTTTACGGTGTGAGGGTCAtcaaaaatt
actaaaaattgATACTCGATGCCATTCTGCTTTTTGTCgaataatcaaac
aaaaatcagGGGGGTGGAAATAAAGAAATTGAGGGAAAAATGAAGATGGC
ATTTCTACTTAGCTgataccagatgtggaaatttGCTACGGCACGCTTTG
CTTTCTATGTCGGGCGATTTCTACATTGGTAGTAATTTGGCCTGtccctt
cagagctttagtgtgggcggccgccaatacaccATTGGAATATAAGATAG
AATctctcccctaccttcgggtaaaaaaactatcaaaaaaggGAACCTGC
GAATCAGCTTGGATTGTGTTAAACCTTTCTTATCTTCATTATCAATCAAT
AAGCCATGCCATCCAGCATATATTAATATACATATATATTAAAAACAcat
ttattggacctacctggaggtcctataaattaacctctgtccgtccatcc
gttcgttcgtccgtccgtttgttaccagcttttctcaggattggctcatt
agttttttctgatttttggcacaatgatgcaaaatgccaatgcccaaaat
gtgacggagcccgattttcgaaaaaaattcatttccggccgaaaatgccg
gaaatatgccggaaaaaccgtttttttggcatattctcaagatttcatca
ttagttttttctgattttttgcacaaagatgcgtattagcaatgcccaaa
ttAGCCgtgtccgatttttgagaaaaaaatttttccggtcgaaaatgccg
gaaatatgccggaaatcgccgtttttgcagattttcatcggactttttcc
ttatatttcgttgttttttcacacaaaaatattattaatagggatgtcca
cgatcaagcatgattcaattgtcaataaaactgatatttgaagccggaac
tttctgaAAATCGCCGGAatagccgattttcgccggaaaaacggtgtttc
ttgaatttcttgagctgtactttatattttttcatgaaatttttcacact
gatgcaaaatggtaatacctaaattgtgacgaagcccgattttcgaaaaa
aattcatttccggccgaaaatgccggaaatatgccggaaaacgttttttc
tgattttgcgcccaaagatgcgtattaacaatgtccaAATCATGGCCGAG
Tccaattcttgagaaaaaattttttccggcggaaaatgcctgaaatatgc
cggaaatcgccgtttttctagattttcattggactttttccttataattg
gtagttttttcattcaaaaacattattaatagcaatgcccaccatcaagc
atgtttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNtgacaatacctaaaatgtgacggagcccgatttttgaaaaacat
ttttttccggccgaaaatgccggaaatatgccggaaaaccggttttttga
cattttttatttttatttttttctgattttttgcataaagatgcgtattt
cgcaatgctcaaaacatggccgacttcgatttttgagaaaaaattttttc
cggttgaaaattccggaaattgctgtttttgcagattttcattggatttt
ttccttatatttctatgtttttcacacaaaaacattattgataacaatgc
tcaccatcaagcatgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNaccatcaagcatgattcaattttcaataaaactgat
ttttgcgaccagaactttctatctattttttccctacaacccttccctct
ccccccaccatcaatcaatgatgaatttcttgcgttatgcattttcgcta
acaATATgcgttttctgactgattttttttcattttcctccttgcattgc
tatctaactttcatcatcaggtaggtccattcagcatctagcttgttttc
tAAGTAAAATACGAAGCTTCTCATGAGACAAACCTATATTATCAAgtaca
gaattaaaaaaaaatNTTttttctagtttaaatttgccactaatgtactg
gcaaaaaccggggtatttccgtagaaaacatcacgtcatgaatatcatga
atagagttTAAAAACTATGTTCAAACGTCTTCATATATGTAcactttttg
caaattttggatTTGCCACCAATTTCTTACCTTTGTACTTTTACTTTCAT
TAATATAGGATTCTGGTGAAGTTGTTGCAATTCAATACTGATCCAATCAT
TCAAGCTGTTGCATGCCACGATTTGGGTGAATTCATTCGACACTACCCTC
GTGCTAAACCGTAAGTAGTGGCTTGGCCATAGTAGTGTTTAGAATTGTCG
GATCATCTTATAAAAACCCGCCAAGGACCCAAGTTTTTCGGTCCTTGAAA
TGTCCCGGAAAAAGTGGGGTTTTTTGGGGGTTTTTATTAGATTTTCCtga
tttcttttttggacctaccccggtggagatcctataaattaaccgttgtc
cgttcgttcgtccgtttgtTCGTTATGAGCTTTTCTCCAGATTGACTCAT
TCAATTATCcgatattttgcacaaagaatcaaaatggtaaaccctcgaat
gtgacggagcccgattttgggccaaaatatgcccaaaaataaggtttttt
gagatttcctCGAGTTTGAATCATTAAATGTTTCTGAATTTAATGTATTT
AATGTTTTCTGTTAAATAGCAAGGTGGGTCCTTAAAAGTATCacttgatt
gttttttttttctgtagaGCTTTTGATGCTTTGGGATGCAAAGAGTTGGT
GATGCAGCGAATGGGTCATGAGAACGAACAAGTAAAATatgaagcacttt
tagctgttcAAAAACTTATGGTTCATAATTGGTAAGAGCTATGTTCATCT
GTTTCTTTAGCGAGTGATTCAGACTTCTTTTCGAGTAAAcccaatttttg
acaaaaacatTGCAATAATCCAAAAATACATTCAGCTTTTGATGTTAAAG
GTCGTAGATCTATGTCTTGTTTTCGTAGTAGTATTTGTTTCTACCCCCTT
TTTATACGTCGTATACCTAATAATCTTTAATTTGAATCGcaaacctctac
aaaaccccaggtaaaACACATCGAATCCGTTaatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000046XLOC_000046Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000089-exon-sc0000001-1491911889:1826493..1826806TCONS_00000089-exon-sc0000001-1491911889:1826493..1826806Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1826493..1826806TCONS_00000089-exon-sc0000001-1510915933:1826493..1826806Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1826493..1826806TCONS_00000089-exon-sc0000001-1575043694:1826493..1826806Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1827264..1827361TCONS_00000089-exon-sc0000001-1491911889:1827264..1827361Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1827264..1827361TCONS_00000089-exon-sc0000001-1510915933:1827264..1827361Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1827264..1827361TCONS_00000089-exon-sc0000001-1575043694:1827264..1827361Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1827722..1827829TCONS_00000089-exon-sc0000001-1491911889:1827722..1827829Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1827722..1827829TCONS_00000089-exon-sc0000001-1510915933:1827722..1827829Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1827722..1827829TCONS_00000089-exon-sc0000001-1575043694:1827722..1827829Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1828180..1828264TCONS_00000089-exon-sc0000001-1491911889:1828180..1828264Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1828180..1828264TCONS_00000089-exon-sc0000001-1510915933:1828180..1828264Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1828180..1828264TCONS_00000089-exon-sc0000001-1575043694:1828180..1828264Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1828697..1828765TCONS_00000089-exon-sc0000001-1491911889:1828697..1828765Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1828697..1828765TCONS_00000089-exon-sc0000001-1510915933:1828697..1828765Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1828697..1828765TCONS_00000089-exon-sc0000001-1575043694:1828697..1828765Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1829479..1829579TCONS_00000089-exon-sc0000001-1491911889:1829479..1829579Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1829479..1829579TCONS_00000089-exon-sc0000001-1510915933:1829479..1829579Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1829479..1829579TCONS_00000089-exon-sc0000001-1575043694:1829479..1829579Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1832930..1833008TCONS_00000089-exon-sc0000001-1491911889:1832930..1833008Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1832930..1833008TCONS_00000089-exon-sc0000001-1510915933:1832930..1833008Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1832930..1833008TCONS_00000089-exon-sc0000001-1575043694:1832930..1833008Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1833455..1833501TCONS_00000089-exon-sc0000001-1491911889:1833455..1833501Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1833455..1833501TCONS_00000089-exon-sc0000001-1510915933:1833455..1833501Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1833455..1833501TCONS_00000089-exon-sc0000001-1575043694:1833455..1833501Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1835951..1836052TCONS_00000089-exon-sc0000001-1491911889:1835951..1836052Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1835951..1836052TCONS_00000089-exon-sc0000001-1510915933:1835951..1836052Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1835951..1836052TCONS_00000089-exon-sc0000001-1575043694:1835951..1836052Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1491911889:1836510..1836877TCONS_00000089-exon-sc0000001-1491911889:1836510..1836877Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1510915933:1836510..1836877TCONS_00000089-exon-sc0000001-1510915933:1836510..1836877Clytia hemisphaericaexon
TCONS_00000089-exon-sc0000001-1575043694:1836510..1836877TCONS_00000089-exon-sc0000001-1575043694:1836510..1836877Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1826493..1836877 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
128.645	136.62	92.8651	76.6749	44.4293	42.5954	69.933	68.4498	129.735	119.387	106.275	110.834	84.9759	76.1346	97.0786	108.216	122.146	109.421	61.3557	80.7374	59.6558	61.1376	72.6808	76.8471	58.2735	53.4101	58.5202	41.1571	111.739	91.1815
Blast
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BLAST of TCONS_00000089 vs. Swiss-Prot (Human)
Match: VATH (V-type proton ATPase subunit H OS=Homo sapiens GN=ATP6V1H PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.321e-118
Identity = 196/393 (49.87%), Postives = 262/393 (66.67%), Query Frame = 3 
Query:    3 QCICTMMTLIREVAKEHVIQYXXXXXXXXXXXXXXXXKIIHQTAAKHNFNVWPPLKNLLNRDDQIIMHVASRLLAKLSTFSKTKMPDSDLVFYLTWLKGQFS---------------VPSND---YLQSAAECLQWVLRVDEYRLPFVNADGXXXXXXXXXXNLGFQLQYQFIFCIWMLSFNVEIAGRIGENNVIPVMADILRTSQKEKVTRIIIATFRNLLEKP---EQSKNACVALIQSKLLPVFNVLINKTWGDEDIKEDLEFISEKLSHSVQDLSTWDEYVAEVKSGRLEWSPVHREEKFWRENAIKICEKNYELLKILVKLLQFNTDPIIQAVACHDLGEFIRHYPRAKPAFDALGCKELVMQRMGHENEQVKYEALLAVQKLMVHNW 1118
            QC  T + L+  + KE  +QY+L M+DD+L  +  RV I    A       WP    +LNR D   +H+A+R++AKL+ + K  M  SDL +Y  W+K Q S               V S+D   Y+Q  A CLQ +LRV+EYR  +V ADGV+ ++ VL +  GFQLQYQ IF IW+L+F+ ++   +   N+IPV++DIL+ S KEKVTRII+A FRN LEK    E  +   +A+IQ K+L     L  + + DEDI ED++F+ EKL  SVQDLS++DEY +E+KSGRLEWSPVH+ EKFWRENA+++ EKNYELLKIL KLL+ + DP + AVA HD+GE++RHYPR K   + LG K+LVM  M HE++QV+Y ALLAVQKLMVHNW
Sbjct:   72 QCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNW 464
The following BLAST results are available for this feature:
BLAST of TCONS_00000089 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VATH2.321e-11849.87V-type proton ATPase subunit H OS=Homo sapiens GN=... [more]
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