TCONS_00000064 (transcript) - C. hemisphaerica

Overview
Name
Unique NameTCONS_00000064
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3949

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000064 ID=TCONS_00000064|Name=|organism=Clytia hemisphaerica|type=transcript|length=3949bp
GAACATTAGAAATGCAAGATAAGgaataaattacgtcacgagcaagTTTT
ACCTCGTTAGTTTTCAAAAGATTGGGTGAAAAATATGGTGAACCTTTTCA
ATCCTAGAGCTACGTACTTTTCTCAAAGGGACAGGTCAGCCTGAAACCAG
TTATCTAGcctgtttttatcaaaattgagcTACAGAGCTTCAGAAAGCAT
TCATTAGTTTGGTGTCATTGGATTAATATCAGTCGGTAAATGAGTACCAC
TAAGCACTTCAGCATTACTGGATATTTCTTGTTGCTTAACCACAAGTGAA
ATAAGACTTGCTGCTTCTCAGTTACAGAAACGGCTAATTGATTGATTGGC
CTGAATGCGTTAGTTGTTTTAAATctgaaaatatcaatttttttaacatt
tctcTTCGTATCTTTTAGATTTTTCAGAGCcagacccgggggggggcact
caaggtaaatgacctaccagacgttcggcccttaagggtaggtttttcat
agttcagctagtgcactgtaagggtaggaaattttgaNTCGTTCACAAAA
CCATTCAAGTTTCCGATCAGGGATGCAGCCACGGTACGATCAGCACCATC
ACAGCCAACAACGTCATCACCATCATCAACATCAGTTGCTAGATCGCAAG
TCGTCCTCCGTCATGGACTTAAGATCGACTTCGGATTATTGCCGTCCATC
ACCAGACAGTACCATGCTTTACAACAGCCGTGCATTGAAGAGACTTTCAA
TTAAACCAGAACTAGATGAAGATGAGGGAAACATCAGTGATCATTCAACG
ACCTCCAGTGCTAGTTACTCAGGAACCAGTTTATCAGGGAGTTTCTCAGG
CTCACCACAAATGCAAAAAAGAATTATCCGTTCCGGTAACTTCAGTCAAA
GAGGCGGAGGTGCACCACCTATAAAACACGCCCAAAGCATGGATAACATC
TTTTCCAGTCGCACTTATGAGCATGAGTCACGTGGTAATGAATATCTTTT
TGGATCCACAATGCAACGGAGGTCAGCTAAACGAATCCAGTCAACCAAGA
GAGCTCAAATgatcaaaatgaaaagttttgatGAACTTTTATCGTCTAAA
AGTACTTCAAACTTAACTACACTGAGCTCGTCAACAAGGCTCGGCCATTT
GGGGTCAGGACCGAGAAGGGCATCTACCAAAACGAACACGCCCAGTGCTA
ACTTGATGACGATGAGaaataatttgatgacgtcatcataccGTAATTTA
GCGGACCGGAATGTGAGAGAAAACCCTGCATTTGCTGAACCAACAAAgAC
ATTGCGAACGTCAAGTCCATATTTAGAACGTCGTTTAGCAGAAGCCAAAG
AACGTCAATCGAAAAGGTCCGCCGCTCTCAAAAATCTTGATACAGATTTT
GACAAAGCGAAAGCAATTATCAAGAAATACAAATCGAACGAAAATCTATT
GTCTATTTCAAACAAAGATAATGGATTGGTTAATGGTGATAGCCAATCAG
AAGACAAGGATCATTACCACGTGATATGAAAGAGGATCGTTTGATTGGTT
TATTGGAAGTTTAATGGTGATAGCCAATCAGAAGACAAGGATCGTTACCA
CGTGATATGAAACAGGATCGTTTATTGGTTTATTGGAAGAGGGATACTTA
ACAGTTTCCGGTGGATTTCGCGCCGAAAGGGACAACCCTAAATGTGTATT
AGTTGCATGGAATTATAATAAATTATAGGCACTGATTATTCCAAAATCCA
AAACAAAAGATAAGAAAAGCCTTATTGTTTGATTTGGTGCCCTATGCGAG
AATGCATGAGGatttaaaataaattgattGATTGGCAAATTACGGGAAAA
AACTTCAGCGTTGATAGACAAAGTTTGAGCAAAATTattcgaaaaaatga
aaatattgaagaacACGCAAGAAATATATAGCCAAGGCAGAACAGATGAT
TTTAAGtgtaatatttttatatttgtaAGCTATCCGTATTATATTAATGT
TATGTTTTAATAACTTAACTAAGATAATTTTTTTCGTAAATTATATCACC
TTATACCAGAAGAATTTATGTAATTTAGTTCTAGTTCTGTCTAAAAAGtt
gctacatgtttttttataagcattgtacttataagcatatctaggctcag
atatggggaaaaattaagcatatggcaagcattacttgagcctacgaaaa
atgttttttcctgattttggctttttttggctggaattttacggcTTTCA
GTATTTCCTTAAATTTTTGCTTCGGATATAAGATCCCTCAAGCATTCTTT
CAGCCTTATTAATCTTTCGACCTAAgtatctctgagcctgtttttggatt
cttatatgcttataaaaaaaaacatgtaatgggTTTCTGATGCATTAATC
TAGCTAAAACATATCTTCAccgaaaaatctttaaaatagaaTATTTCGCA
CATGTAGAAAAATAGCGAGTTTGTTAAAAGCTTTTGAAGAGAGAAGAAAA
gctgaaacaatttgaaactaTTTGCAATGTTAGTCCGCAAAATCGACTGG
TTTAAAATGGCAGGCAAAGTGATTGTCTACACCACTACGGTACAAAAAAA
CCATACATTAACTAACTTACGAAACACTAGGGCTTTTAGTTGGGAAACAA
TAAGTTGTCCAAAACGAGAActgatacacccctgtgtcacagacccggtg
gaccccccaccccagtggaaaaataggacaaaaaatcgtccccggtggaa
aaaatatcctacaatttcaaccccactgcgaaattgcactatgattttat
ccccattgaaaactgaatgtaaaaaattgcactccaaaaccatccccact
ggaattttcgagctggaaacaatagattttctatccccattggtattttg
atagaaattttcatccccactgagggaaaaagttctaccggggcactgag
acagagGGGTGTACTGATAATTGCTCAATTCGAAGCCTATTGAATACACG
ACCACATCCTAACATCACTCAAACATACAATAACCCTTCCAGGTTTGCTA
TTAAACCTGACAATATTTCTGTTTCCCGGAAAGGAAAATACAAATTTTAT
CTAGgctgtccacatagtacgtacgcactaaaatgtcgaaaattgagtac
cccctggtaagtacgtactttttcatttaaacccccccccctccttggtt
gaagaaaatttcgaattcaaatcgtttggtttggagctttatttcataca
tgaaactcaatgtttattaagaatttatttcttttccttgatgcgtatta
AAAGTCGACAggaaaacaagcaaaaaagggctatgaaatttttttttctg
cgtacgtatattttcttttgacccctcccctccccgcttttgagaagacc
ccccttcccccttagtgcgtaagtactatgtggacggcccctaatGCGAA
AAAGACATCACCAATAGAAAAGTGTTAAAATAAGTTCATGATGTGTGTTC
ATATTTTTTTGTCTACTGTGTAAAAGACATTATACTAATACataaaagtt
ggaaaatattcatgatgatgATGCATGTTCATGTTTTTGAGCTTCTTGGC
GTTCCATCAGACATAAATGATGTTCGTCTTGGTGTTTTTTCACGCATGCG
TCATTCATGGCAAGTTTATCATCATTGGTAAATTCGTTCGAAAACCAAGG
AATATCAGCGTAACACGTTTCGTTATTGTCATCTGCATGTTTGATGCAAG
TCTCGTAAGTGATATAGTTGTTCGTACGCTTGGCGATGCTTCGCGATTCT
GATATCGACAATAAACAAACCAACACGGCACATATTGTGAGAACTTGATA
GTATTTCATGTTGATCACTTTGGTGGATTTATATCTTGACGTTTTTCGTA
TGCTTGCTATAATGCAAAGAGAtgtcaaaagttgaattttcattttttg
Run BLAST on NCBI

protein sequence of TCONS_00000064-protein

>TCONS_00000064-protein ID=TCONS_00000064-protein|Name=TCONS_00000064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
MQPRYDQHHHSQQRHHHHQHQLLDRKSSSVMDLRSTSDYCRPSPDSTMLY
NSRALKRLSIKPELDEDEGNISDHSTTSSASYSGTSLSGSFSGSPQMQKR
IIRSGNFSQRGGGAPPIKHAQSMDNIFSSRTYEHESRGNEYLFGSTMQRR
SAKRIQSTKRAQMIKMKSFDELLSSKSTSNLTTLSSSTRLGHLGSGPRRA
STKTNTPSANLMTMRNNLMTSSYRNLADRNVRENPAFAEPTKTLRTSSPY
LERRLAEAKERQSKRSAALKNLDTDFDKAKAIIKKYKSNENLLSISNKDN
GLVNGDSQSEDKDHYHVI
Run BLAST on NCBI

transcript from alignment at sc0000001:1447576..1454226+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000064 ID=TCONS_00000064|Name=TCONS_00000064|organism=Clytia hemisphaerica|type=transcript|length=6651bp|location=Sequence derived from alignment at sc0000001:1447576..1454226+ (Clytia hemisphaerica)
GAACATTAGAAATGCAAGATAAGgaataaattacgtcacgagcaagTTTT ACCTCGTTAGTTTTCAAAAGATTGGGTGAAAAATATGGTGAACCTTTTCA ATCCTAGAGCTACGTACTTTTCTCAAAGGGACAGGTCAGCCTGAAACCAG TTATCTAGcctgtttttatcaaaattgagcTACAGAGCTTCAGAAAGCAT TCATTAGTTTGGTGTCATTGGATTAATATCAGTCGGTAAATGAGTACCAC TAAGCACTTCAGCATTACTGGATATTTCTTGTTGCTTAACCACAAGTGAA ATAAGACTTGCTGCTTCTCAGTTACAGAAACGGCTAATTGATTGATTGGC CTGAATGCGTTAGTTGTTTTAAATctgaaaatatcaatttttttaacatt tctcTTCGTATCTTTTAGATTTTTCAGAGCcagacccgggggggggcact caaggtaaatgacctaccagacgttcggcccttaagggtaggtttttcat agttcagctagtgcactgtaagggtaggaaattttgaNTCGTTCACAAAA CCATTCAAGTTTCCGATCAGGGATGCAGCCACGGTACGATCAGCACCATC ACAGCCAACAACGTCATCACCATCATCAACATCAGTTGCTAGATCGCAAG TCGTCCTCCGTCATGGACTTAAGATCGACTTCGGGTAAGAACAACATATT CTTTTCTTTCATAGCAATCTTATATATTACCATGCTCAAAACGAGCGAAC TATTTCGCATTGACTGGCACAAGCTCTCGGATTGGTGTATTAATTAATCA ATTAATTAATTGGTGTAtcaagtaattttttttctttgatataaAATCCC TCTCTGGAACATCTTTTAAATGAGTATTccgattctatcaaaagttaaat cCTATTTtattttgtctccgctgcagattataACGAGAGAAAGACTTTTC TTTAGTGGTATTTGTCAAGGAAAATAACTGTTTCTTTTAATGAATCAATA CTGTCATCTCTATGGACATATTGTTTCCAGATTATTGCCGTCCATCACCA GACAGTACCATGCTTTACAACAGCCGTGCATTGAAGAGACTTTCAATTAA ACCAGAACTAGATGAAGATGAGGGAAACATCAGTGATCATTCAACGACCT CCAGTGCTAGTTACTCAGGTATACTACTTCATATTTCTCTAGTCTTTCTT AGATTATGTTCAGACATTACGCTTCGAAACGAAACGGTTACGAAACATAG TAGATGGACACCAAAAACGGATCGAAACAGTAACGCTCCACTACACATTG AACTTTTGAGATTCTTAGAAAGTAAACACTTTCGGCCAGCTCAGCTCATT AAATTCTTTTACTTCTGTttacacatatttcatatcaggacagtgtcttt cCAATGTAAGCATTTTTTCTTCCTTCGGACCAATCTTGCTACACATCCGT GTCAACTCAATATCAAAaggcttgtaaattaaaattgatgaataagcaaa cgatatcacttttatctaaaaacaaaacctttaatttctttttttctctt ctagGAACCAGTTTATCAGGGAGTTTCTCAGGCTCACCACAAATGCAAAA AAGAATTATCCGTTCCGGTAACTTCAGTCAAAGAGGCGGAGGTGCACCAC CTATAAAACACGCCCAAAGCATGGATAACATCTTTTCCAGTCGCACTTAT GAGCATGAGTCACGTGGTAATGAATATCTTTTTGGATCCACAATGCAACG GAGGTCAGCTAAACGAATCCAGTCAACCAAGAGAGCTCAAATgatcaaaa tgaaaagttttgatGAACTTTTATCGTCTAAAAGTACTTCAAACTTAACT ACACTGAGCTCGTCAACAAGGCTCGGCCATTTGGGGTCAGGACCGAGAAG GGCATCTACCAAAACGAACACGCCCAGTGCTAACTTGATGACGATGAGaa ataatttgatgacgtcatcataccGTAATTTAGCGGACCGGAATGTGAGA GAAAACCCTGCATTTGCTGAACCAACAAAggtaatatttttaatttgtga aaaaaatatcataaaatgaTTCAAATAAATAGTTTAGTTTACTGCATATT TGTTACATTGCCAATGAATAATTAGCTGCTATTTGCGTATTTGCCtaagg ctgcacgcatcccctctgataagNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNtttcacctttcaaagtctctctaaggg ttacaaaaatcaggaaatttcaaagtagtctctctaagggtgggaaaaat cactatttttagaaaaaaaaattgattttgagagaaaaaaattacagaaa agtctcactaagggtaggaaatttttgaaaattagggaaaatttttcgaa aaagcctctctaagggtcactttttcactaaaatttggtctctctaaggg tcggttttcggaggtcccgtccgcacatacccctcattcaccaaccctag tacccccccCCCGGGATTTTTGAGTAATTTTCACCCATTTCaatgtgaca aaatttccaatttgccaaattttacgaaattgatctatcgccaaattaaa tccccgccaaaaattgtattttggccaatcgccaaattaagtcctcgcca aaatttatccacttaaggtaattcGAGCTAGTACTCATCTTCCATCATCT GAAACCCACATAGAATTGTTTTAATCCAAATCTCGAAATGATTATAATTT TCTCACATTTACTTATTCTTCCTACAAAGTACTGTAAAGTTAAAATTTAG agtagagtctacttctggctgaatttttgatgacgctgagtccagtgaag tagactaggagcatttgacgaggttgccatactaccgggccacttaatca cCCCATCcagtttataaaaaaagctttaagtggaccccgggctaaggTAC CTTCAGCTATAAAAAGGGTTAAATTATCTTTATTGTTTTTACAATTCTAG ACATTGCGAACGTCAAGTCCATATTTAGAACGTCGTTTAGCAGAAGCCAA AGAACGTCAATCGAAAAGGTCCGCCGCTCTCAAAAATCTTGATACAGATT TTGACAAAGCGAAAGCAATTATCAAGAAATACAAATCGAACGAAAATCTA TTGTCTATTTCAAACAAAGATAATGGATTGGTTAATGGTGATAGCCAATC AGAAGACAAGGATCATTACCACGTGATATGAAAGAGGATCGTTTGATTGG TTTATTGGAAGTTTAATGGTGATAGCCAATCAGAAGACAAGGATCGTTAC CACGTGATATGAAACAGGATCGTTTATTGGTTTATTGGAAGAGGGATACT TAACAGTTTCCGGTGGATTTCGCGCCGAAAGGGACAACCCTAAATGTGTA TTAGTTGCATGGAATTATAATAAATTATAGGCACTGATTATTCCAAAATC CAAAACAAAAGATAAGAAAAGCCTTATTGTTTGATTTGGTGCCCTATGCG AGAATGCATGAGGatttaaaataaattgattGATTGGCAAATTACGGGAA AAAACTTCAGCGTTGATAGACAAAGTTTGAGCAAAATTattcgaaaaaat gaaaatattgaagaacACGCAAGAAATATATAGCCAAGGCAGAACAGATG ATTTTAAGtgtaatatttttatatttgtaAGCTATCCGTATTATATTAAT GTTATGTTTTAATAACTTAACTAAGATAATTTTTTTCGTAAATTATATCA CCTTATACCAGAAGAATTTATGTAATTTAGTTCTAGTTCTGTCTAAAAAG ttgctacatgtttttttataagcattgtacttataagcatatctaggctc agatatggggaaaaattaagcatatggcaagcattacttgagcctacgaa aaatgttttttcctgattttggctttttttggctggaattttacggcTTT CAGTATTTCCTTAAATTTTTGCTTCGGATATAAGATCCCTCAAGCATTCT TTCAGCCTTATTAATCTTTCGACCTAAgtatctctgagcctgtttttgga ttcttatatgcttataaaaaaaaacatgtaatgggTTTCTGATGCATTAA TCTAGCTAAAACATATCTTCAccgaaaaatctttaaaatagaaTATTTCG CACATGTAGAAAAATAGCGAGTTTGTTAAAAGCTTTTGAAGAGAGAAGAA AAgctgaaacaatttgaaactaTTTGCAATGTTAGTCCGCAAAATCGACT GGTTTAAAATGGCAGGCAAAGTGATTGTCTACACCACTACGGTACAAAAA AACCATACATTAACTAACTTACGAAACACTAGGGCTTTTAGTTGGGAAAC AATAAGTTGTCCAAAACGAGAActgatacacccctgtgtcacagacccgg tggaccccccaccccagtggaaaaataggacaaaaaatcgtccccggtgg aaaaaatatcctacaatttcaaccccactgcgaaattgcactatgatttt atccccattgaaaactgaatgtaaaaaattgcactccaaaaccatcccca ctggaattttcgagctggaaacaatagattttctatccccattggtattt tgatagaaattttcatccccactgagggaaaaagttctaccggggcactg agacagagGGGTGTACTGATAATTGCTCAATTCGAAGCCTATTGAATACA CGACCACATCCTAACATCACTCAAACATACAATAACCCTTCCAGGTTTGC TATTAAACCTGACAATATTTCTGTTTCCCGGAAAGGAAAATACAAATTTT ATCTAGgctgtccacatagtacgtacgcactaaaatgtcgaaaattgagt accccctggtaagtacgtactttttcatttaaacccccccccctccttgg ttgaagaaaatttcgaattcaaatcgtttggtttggagctttatttcata catgaaactcaatgtttattaagaatttatttcttttccttgatgcgtat taAAAGTCGACAggaaaacaagcaaaaaagggctatgaaatttttttttc tgcgtacgtatattttcttttgacccctcccctccccgcttttgagaaga ccccccttcccccttagtgcgtaagtactatgtggacggcccctaatGCG AAAAAGACATCACCAATAGAAAAGTGTTAAAATAAGTTCATGATGTGTGT TCATATTTTTTTGTCTACTGTGTAAAAGACATTATACTAATACataaaag ttggaaaatattcatgatgatgATGCATGTTCATGTTTTTGAGCTTCTTG GCGTTCCATCAGACATAAATGATGTTCGTCTTGGTGTTTTTTCACGCATG CGTCATTCATGGCAAGTTTATCATCATTGGTAAATTCGTTCGAAAACCAA GGAATATCAGCGTAACACGTTTCGTTATTGTCATCTGCATGTTTGATGCA AGTCTCGTAAGTGATATAGTTGTTCGTACGCTTGGCGATGCTTCGCGATT CTGATATCGACAATAAACAAACCAACACGGCACATATTGTGAGAACTTGA TAGTATTTCATGTTGATCACTTTGGTGGATTTATATCTTGACGTTTTTCG TATGCTTGCTATAATGCAAAGAGAtgtcaaaagttgaattttcatttttt g

Coding sequence (CDS) from alignment at sc0000001:1447576..1454226+

>TCONS_00000064 ID=TCONS_00000064|Name=|organism=Clytia hemisphaerica|type=CDS|length=3828bp|location=Sequence derived from alignment at sc0000001:1447576..1454226+ (Clytia hemisphaerica)
ATGCAGCCACGGTACGATCAGCACCATCACAGCCAACAACGTCATCACCA
TCATCAACATCAGTTGCTAGATCGCAAGTCGTCCTCCGTCATGGACTTAA
GATCGACTTCGGATTATTGCCGTCCATCACCAGACAGTACCATGCTTTAC
AACAGCCGTGCATTGAAGAGACTTTCAATTAAACCAGAACTAGATGAAGA
TGAGGGAAACATCAGTGATCATTCAACGACCTCCAGTGCTAGTTACTCAG
GAACCAGTTTATCAGGGAGTTTCTCAGGCTCACCACAAATGCAAAAAAGA
ATTATCCGTTCCGGTAACTTCAGTCAAAGAGGCGGAGGTGCACCACCTAT
AAAACACGCCCAAAGCATGGATAACATCTTTTCCAGTCGCACTTATGAGC
ATGAGTCACGTGGTAATGAATATCTTTTTGGATCCACAATGCAACGGAGG
TCAGCTAAACGAATCCAGTCAACCAAGAGAGCTCAAATgatcaaaatgaa
aagttttgatGAACTTTTATCGTCTAAAAGTACTTCAAACTTAACTACAC
TGAGCTCGTCAACAAGGCTCGGCCATTTGGGGTCAGGACCGAGAAGGGCA
TCTACCAAAACGAACACGCCCAGTGCTAACTTGATGACGATGAGaaataa
tttgatgacgtcatcataccGTAATTTAGCGGACCGGAATGTGAGAGAAA
ACCCTGCATTTGCTGAACCAACAAAgACATTGCGAACGTCAAGTCCATAT
TTAGAACGTCGTTTAGCAGAAGCCAAAGAACGTCAATCGAAAAGGTCCGC
CGCTCTCAAAAATCTTGATACAGATTTTGACAAAGCGAAAGCAATTATCA
AGAAATACAAATCGAACGAAAATCTATTGTCTATTTCAAACAAAGATAAT
GGATTGGTTAATGGTGATAGCCAATCAGAAGACAAGGATCATTACCACGT
GATATGAATGCAGCCACGGTACGATCAGCACCATCACAGCCAACAACGTC
ATCACCATCATCAACATCAGTTGCTAGATCGCAAGTCGTCCTCCGTCATG
GACTTAAGATCGACTTCGGATTATTGCCGTCCATCACCAGACAGTACCAT
GCTTTACAACAGCCGTGCATTGAAGAGACTTTCAATTAAACCAGAACTAG
ATGAAGATGAGGGAAACATCAGTGATCATTCAACGACCTCCAGTGCTAGT
TACTCAGGAACCAGTTTATCAGGGAGTTTCTCAGGCTCACCACAAATGCA
AAAAAGAATTATCCGTTCCGGTAACTTCAGTCAAAGAGGCGGAGGTGCAC
CACCTATAAAACACGCCCAAAGCATGGATAACATCTTTTCCAGTCGCACT
TATGAGCATGAGTCACGTGGTAATGAATATCTTTTTGGATCCACAATGCA
ACGGAGGTCAGCTAAACGAATCCAGTCAACCAAGAGAGCTCAAATgatca
aaatgaaaagttttgatGAACTTTTATCGTCTAAAAGTACTTCAAACTTA
ACTACACTGAGCTCGTCAACAAGGCTCGGCCATTTGGGGTCAGGACCGAG
AAGGGCATCTACCAAAACGAACACGCCCAGTGCTAACTTGATGACGATGA
GaaataatttgatgacgtcatcataccGTAATTTAGCGGACCGGAATGTG
AGAGAAAACCCTGCATTTGCTGAACCAACAAAgACATTGCGAACGTCAAG
TCCATATTTAGAACGTCGTTTAGCAGAAGCCAAAGAACGTCAATCGAAAA
GGTCCGCCGCTCTCAAAAATCTTGATACAGATTTTGACAAAGCGAAAGCA
ATTATCAAGAAATACAAATCGAACGAAAATCTATTGTCTATTTCAAACAA
AGATAATGGATTGGTTAATGGTGATAGCCAATCAGAAGACAAGGATCATT
ACCACGTGATATGAATGCAGCCACGGTACGATCAGCACCATCACAGCCAA
CAACGTCATCACCATCATCAACATCAGTTGCTAGATCGCAAGTCGTCCTC
CGTCATGGACTTAAGATCGACTTCGGATTATTGCCGTCCATCACCAGACA
GTACCATGCTTTACAACAGCCGTGCATTGAAGAGACTTTCAATTAAACCA
GAACTAGATGAAGATGAGGGAAACATCAGTGATCATTCAACGACCTCCAG
TGCTAGTTACTCAGGAACCAGTTTATCAGGGAGTTTCTCAGGCTCACCAC
AAATGCAAAAAAGAATTATCCGTTCCGGTAACTTCAGTCAAAGAGGCGGA
GGTGCACCACCTATAAAACACGCCCAAAGCATGGATAACATCTTTTCCAG
TCGCACTTATGAGCATGAGTCACGTGGTAATGAATATCTTTTTGGATCCA
CAATGCAACGGAGGTCAGCTAAACGAATCCAGTCAACCAAGAGAGCTCAA
ATgatcaaaatgaaaagttttgatGAACTTTTATCGTCTAAAAGTACTTC
AAACTTAACTACACTGAGCTCGTCAACAAGGCTCGGCCATTTGGGGTCAG
GACCGAGAAGGGCATCTACCAAAACGAACACGCCCAGTGCTAACTTGATG
ACGATGAGaaataatttgatgacgtcatcataccGTAATTTAGCGGACCG
GAATGTGAGAGAAAACCCTGCATTTGCTGAACCAACAAAgACATTGCGAA
CGTCAAGTCCATATTTAGAACGTCGTTTAGCAGAAGCCAAAGAACGTCAA
TCGAAAAGGTCCGCCGCTCTCAAAAATCTTGATACAGATTTTGACAAAGC
GAAAGCAATTATCAAGAAATACAAATCGAACGAAAATCTATTGTCTATTT
CAAACAAAGATAATGGATTGGTTAATGGTGATAGCCAATCAGAAGACAAG
GATCATTACCACGTGATATGAATGCAGCCACGGTACGATCAGCACCATCA
CAGCCAACAACGTCATCACCATCATCAACATCAGTTGCTAGATCGCAAGT
CGTCCTCCGTCATGGACTTAAGATCGACTTCGGATTATTGCCGTCCATCA
CCAGACAGTACCATGCTTTACAACAGCCGTGCATTGAAGAGACTTTCAAT
TAAACCAGAACTAGATGAAGATGAGGGAAACATCAGTGATCATTCAACGA
CCTCCAGTGCTAGTTACTCAGGAACCAGTTTATCAGGGAGTTTCTCAGGC
TCACCACAAATGCAAAAAAGAATTATCCGTTCCGGTAACTTCAGTCAAAG
AGGCGGAGGTGCACCACCTATAAAACACGCCCAAAGCATGGATAACATCT
TTTCCAGTCGCACTTATGAGCATGAGTCACGTGGTAATGAATATCTTTTT
GGATCCACAATGCAACGGAGGTCAGCTAAACGAATCCAGTCAACCAAGAG
AGCTCAAATgatcaaaatgaaaagttttgatGAACTTTTATCGTCTAAAA
GTACTTCAAACTTAACTACACTGAGCTCGTCAACAAGGCTCGGCCATTTG
GGGTCAGGACCGAGAAGGGCATCTACCAAAACGAACACGCCCAGTGCTAA
CTTGATGACGATGAGaaataatttgatgacgtcatcataccGTAATTTAG
CGGACCGGAATGTGAGAGAAAACCCTGCATTTGCTGAACCAACAAAgACA
TTGCGAACGTCAAGTCCATATTTAGAACGTCGTTTAGCAGAAGCCAAAGA
ACGTCAATCGAAAAGGTCCGCCGCTCTCAAAAATCTTGATACAGATTTTG
ACAAAGCGAAAGCAATTATCAAGAAATACAAATCGAACGAAAATCTATTG
TCTATTTCAAACAAAGATAATGGATTGGTTAATGGTGATAGCCAATCAGA
AGACAAGGATCATTACCACGTGATATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000032XLOC_000032Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000064-exon-sc0000001-1491911889:1447576..1448259TCONS_00000064-exon-sc0000001-1491911889:1447576..1448259Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1510915933:1447576..1448259TCONS_00000064-exon-sc0000001-1510915933:1447576..1448259Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1575043694:1447576..1448259TCONS_00000064-exon-sc0000001-1575043694:1447576..1448259Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1491911889:1448606..1448743TCONS_00000064-exon-sc0000001-1491911889:1448606..1448743Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1510915933:1448606..1448743TCONS_00000064-exon-sc0000001-1510915933:1448606..1448743Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1575043694:1448606..1448743TCONS_00000064-exon-sc0000001-1575043694:1448606..1448743Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1491911889:1449130..1449605TCONS_00000064-exon-sc0000001-1491911889:1449130..1449605Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1510915933:1449130..1449605TCONS_00000064-exon-sc0000001-1510915933:1449130..1449605Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1575043694:1449130..1449605TCONS_00000064-exon-sc0000001-1575043694:1449130..1449605Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1491911889:1451576..1454226TCONS_00000064-exon-sc0000001-1491911889:1451576..1454226Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1510915933:1451576..1454226TCONS_00000064-exon-sc0000001-1510915933:1451576..1454226Clytia hemisphaericaexon
TCONS_00000064-exon-sc0000001-1575043694:1451576..1454226TCONS_00000064-exon-sc0000001-1575043694:1451576..1454226Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000064-proteinTCONS_00000064-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1447576..1454226 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0481838 0.0216176 0.0404782 0.0604432 1.34849 1.17093 2.49185 2.79955 1.42851 1.8624 1.79641 1.68267 11.7196 9.8065 2.69923 4.44263 7.5009 13.0638 5.43888 6.12695 7.89565 8.23938 3.02842 4.00477 7.10416 5.79669 4.0165 2.74418 16.8542 15.8878
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000064 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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Spatial Expression
in the tripal_feature_cv_term.tpl.php